RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 NUP98P52948 1817 aa7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 H7C1W4 665 aa7.23□□□□□ -1.25
HERPUD2-204ENST00000426180 ALDH1L1O75891 902 aa7.23□□□□□ -1.25
HERPUD2-204ENST00000426180 PCCAP05165 728 aaPredicted RBP7.23□□□□□ -1.25
HERPUD2-204ENST00000426180 RRP1P56182 461 aaKnown RBP7.23□□□□□ -1.25
HERPUD2-204ENST00000426180 INTS3Q68E01 1043 aaKnown RBP7.23□□□□□ -1.25
HERPUD2-204ENST00000426180 TPTE2Q6XPS3 522 aa7.23□□□□□ -1.25
HERPUD2-204ENST00000426180 UBE3BQ7Z3V4 1068 aa7.23□□□□□ -1.25
HERPUD2-204ENST00000426180 PPP1R42Q7Z4L9 355 aa7.23□□□□□ -1.25
HERPUD2-204ENST00000426180 DZIP1LQ8IYY4 767 aaKnown RBP7.23□□□□□ -1.25
HERPUD2-204ENST00000426180 NLGN2Q8NFZ4 835 aa7.23□□□□□ -1.25
HERPUD2-204ENST00000426180 FHDC1Q9C0D6 1143 aaPredicted RBP7.23□□□□□ -1.25
HERPUD2-204ENST00000426180 USP44Q9H0E7 712 aa7.23□□□□□ -1.25
HERPUD2-204ENST00000426180 PPP1R1BQ9UD71 204 aaPredicted RBP7.23□□□□□ -1.25
HERPUD2-204ENST00000426180 SUPT16HQ9Y5B9 1047 aaKnown RBP7.23□□□□□ -1.25
HERPUD2-204ENST00000426180 PXDNLA1KZ92 1463 aa7.23□□□□□ -1.25
HERPUD2-204ENST00000426180 IBTKQ9P2D0 1353 aaPredicted RBP7.22□□□□□ -1.25
HERPUD2-204ENST00000426180 NRXN2Q9P2S2 1712 aa7.22□□□□□ -1.25
HERPUD2-204ENST00000426180 A0A0G2JLW4 131 aa7.22□□□□□ -1.25
HERPUD2-204ENST00000426180 NRG2O14511 850 aaPredicted RBP7.22□□□□□ -1.25
HERPUD2-204ENST00000426180 IRS4O14654 1257 aaPredicted RBP7.22□□□□□ -1.25
HERPUD2-204ENST00000426180 NBPF7P0C2Y1 421 aaPredicted RBP7.22□□□□□ -1.25
HERPUD2-204ENST00000426180 CHRNA5P30532 468 aa7.22□□□□□ -1.25
HERPUD2-204ENST00000426180 CCT4P50991 539 aaKnown RBP7.22□□□□□ -1.25
HERPUD2-204ENST00000426180 EPHA10Q5JZY3 1008 aa7.22□□□□□ -1.25
HERPUD2-204ENST00000426180 SLC10A5Q5PT55 438 aa7.22□□□□□ -1.25
HERPUD2-204ENST00000426180 PAXIP1Q6ZW49 1069 aaPredicted RBP7.22□□□□□ -1.25
HERPUD2-204ENST00000426180 SLC51AQ86UW1 340 aa7.22□□□□□ -1.25
HERPUD2-204ENST00000426180 ZBTB38Q8NAP3 1195 aaPredicted RBP7.22□□□□□ -1.25
HERPUD2-204ENST00000426180 NYXQ9GZU5 481 aa7.22□□□□□ -1.25
HERPUD2-204ENST00000426180 ANKRD36CQ5JPF3 1778 aa7.22□□□□□ -1.25
HERPUD2-204ENST00000426180 RNF123Q5XPI4 1314 aa7.22□□□□□ -1.25
HERPUD2-204ENST00000426180 SH3TC1Q8TE82 1336 aa7.22□□□□□ -1.25
HERPUD2-204ENST00000426180 TNRC6CQ9HCJ0 1690 aaKnown RBP7.22□□□□□ -1.25
HERPUD2-204ENST00000426180 LRP5O75197 1615 aa7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 GRM8O00222 908 aa7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 LCE2BO14633 110 aa7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 NPHP1O15259 732 aa7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 DPEP1P16444 411 aa7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 KCNA3P22001 575 aa7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 GTF2E1P29083 439 aaPredicted RBP7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 ST5P78524 1137 aa7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 ITPRIPQ8IWB1 547 aa7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 FTSJ3Q8IY81 847 aaKnown RBP7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 NKX2-3Q8TAU0 364 aa7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 KAZALD1Q96I82 304 aa7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 SUCLG2Q96I99 432 aa7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 CCDC85AQ96PX6 553 aaPredicted RBP7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 MEIS3Q99687 375 aa7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 BRIP1Q9BX63 1249 aa7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 C9orf78Q9NZ63 289 aaPredicted RBP7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 WWC3Q9ULE0 1092 aa7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 COG6Q9Y2V7 657 aa7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 AFDNP55196 1824 aaKnown RBP7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 UTYO14607 1347 aa7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 CDHR2Q9BYE9 1310 aa7.21□□□□□ -1.26
HERPUD2-204ENST00000426180 COL4A1P02462 1669 aa7.2□□□□□ -1.26
HERPUD2-204ENST00000426180 KLRG2A4D1S0 409 aaPredicted RBP7.2□□□□□ -1.26
HERPUD2-204ENST00000426180 GGCXP38435 758 aa7.2□□□□□ -1.26
HERPUD2-204ENST00000426180 SLC4A3P48751 1232 aa7.2□□□□□ -1.26
HERPUD2-204ENST00000426180 IRX6P78412 446 aaPredicted RBP7.2□□□□□ -1.26
HERPUD2-204ENST00000426180 FOXO4P98177 505 aa7.2□□□□□ -1.26
HERPUD2-204ENST00000426180 SWT1Q5T5J6 900 aaKnown RBP7.2□□□□□ -1.26
HERPUD2-204ENST00000426180 C2CD5Q86YS7 1000 aa7.2□□□□□ -1.26
HERPUD2-204ENST00000426180 SLF2Q8IX21 1173 aa7.2□□□□□ -1.26
HERPUD2-204ENST00000426180 ANKRD44Q8N8A2 993 aa7.2□□□□□ -1.26
HERPUD2-204ENST00000426180 SYT17Q9BSW7 474 aa7.2□□□□□ -1.26
HERPUD2-204ENST00000426180 NPDC1Q9NQX5 325 aaPredicted RBP7.2□□□□□ -1.26
HERPUD2-204ENST00000426180 CD2APQ9Y5K6 639 aa7.2□□□□□ -1.26
HERPUD2-204ENST00000426180 ANKRD31Q8N7Z5 1873 aa7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 RIC1Q4ADV7 1423 aa7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 KIAA1551Q9HCM1 1747 aa7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 CACNA1FO60840 1977 aa7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 ZBTB7BO15156 539 aaPredicted RBP7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 SRGNP10124 158 aa7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 PDE6BP35913 854 aa7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 COPS2P61201 443 aa7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 PDE3AQ14432 1141 aa7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 MVPQ14764 893 aaKnown RBP7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 CRY2Q49AN0 593 aa7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 PADI6Q6TGC4 694 aa7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 TTC13Q8NBP0 860 aa7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 TTLL11Q8NHH1 800 aa7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 CRBNQ96SW2 442 aa7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 C1orf115Q9H7X2 142 aa7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 SEC31BQ9NQW1 1179 aa7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 LRRFIP2Q9Y608 721 aaKnown RBP7.19□□□□□ -1.26
HERPUD2-204ENST00000426180 COL11A2P13942 1736 aaPredicted RBP7.18□□□□□ -1.26
HERPUD2-204ENST00000426180 DDX60Q8IY21 1712 aaKnown RBP7.18□□□□□ -1.26
HERPUD2-204ENST00000426180 H0YIN7 160 aa7.18□□□□□ -1.26
HERPUD2-204ENST00000426180 PDE8AO60658 829 aa7.18□□□□□ -1.26
HERPUD2-204ENST00000426180 CSF1RP07333 972 aa7.18□□□□□ -1.26
HERPUD2-204ENST00000426180 UBTFL1P0CB47 393 aaPredicted RBP7.18□□□□□ -1.26
HERPUD2-204ENST00000426180 HOXA10P31260 410 aaPredicted RBP7.18□□□□□ -1.26
HERPUD2-204ENST00000426180 CTSWP56202 376 aa7.18□□□□□ -1.26
HERPUD2-204ENST00000426180 TGFB2P61812 414 aa7.18□□□□□ -1.26
HERPUD2-204ENST00000426180 SF3B3Q15393 1217 aaKnown RBP7.18□□□□□ -1.26
HERPUD2-204ENST00000426180 LMBR1LQ6UX01 489 aa7.18□□□□□ -1.26
HERPUD2-204ENST00000426180 OLFM4Q6UX06 510 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms