RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 DUOX1Q9NRD9 1551 aa9.97□□□□□ -0.81
HLA-DQA1-204ENST00000422863 DDX60Q8IY21 1712 aaKnown RBP9.97□□□□□ -0.81
HLA-DQA1-204ENST00000422863 BBOX1O75936 387 aa9.97□□□□□ -0.81
HLA-DQA1-204ENST00000422863 GIGYF2Q6Y7W6 1299 aaKnown RBP9.97□□□□□ -0.81
HLA-DQA1-204ENST00000422863 GCC1Q96CN9 775 aa9.97□□□□□ -0.81
HLA-DQA1-204ENST00000422863 CDCA5Q96FF9 252 aa9.97□□□□□ -0.81
HLA-DQA1-204ENST00000422863 UTP14AQ9BVJ6 771 aaKnown RBP9.97□□□□□ -0.81
HLA-DQA1-204ENST00000422863 HRO43593 1189 aa9.96□□□□□ -0.82
HLA-DQA1-204ENST00000422863 ANXA1P04083 346 aa9.96□□□□□ -0.82
HLA-DQA1-204ENST00000422863 VASPP50552 380 aaPredicted RBP9.96□□□□□ -0.82
HLA-DQA1-204ENST00000422863 PKN2Q16513 984 aaKnown RBP9.96□□□□□ -0.82
HLA-DQA1-204ENST00000422863 WASHC4Q2M389 1173 aa9.96□□□□□ -0.82
HLA-DQA1-204ENST00000422863 SLC10A5Q5PT55 438 aa9.96□□□□□ -0.82
HLA-DQA1-204ENST00000422863 DDX46Q7L014 1031 aaKnown RBP9.96□□□□□ -0.82
HLA-DQA1-204ENST00000422863 DPF2Q92785 391 aa9.96□□□□□ -0.82
HLA-DQA1-204ENST00000422863 GGA3Q9NZ52 723 aa9.96□□□□□ -0.82
HLA-DQA1-204ENST00000422863 PSME4Q14997 1843 aa9.96□□□□□ -0.82
HLA-DQA1-204ENST00000422863 BRCA2P51587 3418 aa9.95□□□□□ -0.82
HLA-DQA1-204ENST00000422863 CEP290O15078 2479 aa9.95□□□□□ -0.82
HLA-DQA1-204ENST00000422863 UBE2Q2LH0YL09 131 aa9.95□□□□□ -0.82
HLA-DQA1-204ENST00000422863 C6orf229H3BNL8 230 aa9.95□□□□□ -0.82
HLA-DQA1-204ENST00000422863 ARHGAP33O14559 1287 aa9.95□□□□□ -0.82
HLA-DQA1-204ENST00000422863 U2AF1L5P0DN76 240 aaPredicted RBP9.95□□□□□ -0.82
HLA-DQA1-204ENST00000422863 U2AF1Q01081 240 aaKnown RBP eCLIP9.95□□□□□ -0.82
HLA-DQA1-204ENST00000422863 KIF4BQ2VIQ3 1234 aa9.95□□□□□ -0.82
HLA-DQA1-204ENST00000422863 PRAMEF18Q5VWM3 479 aa9.95□□□□□ -0.82
HLA-DQA1-204ENST00000422863 SULF1Q8IWU6 871 aa9.95□□□□□ -0.82
HLA-DQA1-204ENST00000422863 R3HDMLQ9H3Y0 253 aa9.95□□□□□ -0.82
HLA-DQA1-204ENST00000422863 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.95□□□□□ -0.82
HLA-DQA1-204ENST00000422863 TIMELESSQ9UNS1 1208 aa9.95□□□□□ -0.82
HLA-DQA1-204ENST00000422863 NSFL1CQ9UNZ2 370 aaKnown RBP9.95□□□□□ -0.82
HLA-DQA1-204ENST00000422863 IBTKQ9P2D0 1353 aaPredicted RBP9.95□□□□□ -0.82
HLA-DQA1-204ENST00000422863 COL4A1P02462 1669 aa9.95□□□□□ -0.82
HLA-DQA1-204ENST00000422863 LRRC37AA6NMS7 1700 aa9.95□□□□□ -0.82
HLA-DQA1-204ENST00000422863 RTL9Q8NET4 1388 aa9.94□□□□□ -0.82
HLA-DQA1-204ENST00000422863 TK2O00142 265 aa9.94□□□□□ -0.82
HLA-DQA1-204ENST00000422863 GPR25O00155 361 aa9.94□□□□□ -0.82
HLA-DQA1-204ENST00000422863 ECE2O60344 883 aa9.94□□□□□ -0.82
HLA-DQA1-204ENST00000422863 EIF2S2P20042 333 aaKnown RBP9.94□□□□□ -0.82
HLA-DQA1-204ENST00000422863 EIF4A1P60842 406 aaKnown RBP9.94□□□□□ -0.82
HLA-DQA1-204ENST00000422863 GRAPQ13588 217 aa9.94□□□□□ -0.82
HLA-DQA1-204ENST00000422863 SCARF1Q14162 830 aa9.94□□□□□ -0.82
HLA-DQA1-204ENST00000422863 PARP10Q53GL7 1025 aa9.94□□□□□ -0.82
HLA-DQA1-204ENST00000422863 ANGEL2Q5VTE6 544 aaKnown RBP9.94□□□□□ -0.82
HLA-DQA1-204ENST00000422863 FBXO46Q6PJ61 603 aaPredicted RBP9.94□□□□□ -0.82
HLA-DQA1-204ENST00000422863 GRAPLQ8TC17 118 aaPredicted RBP9.94□□□□□ -0.82
HLA-DQA1-204ENST00000422863 PCGF6Q9BYE7 350 aa9.94□□□□□ -0.82
HLA-DQA1-204ENST00000422863 POLLQ9UGP5 575 aa9.94□□□□□ -0.82
HLA-DQA1-204ENST00000422863 FXR1P51114 621 aaKnown RBP eCLIP9.93□□□□□ -0.82
HLA-DQA1-204ENST00000422863 GPSM2P81274 684 aa9.93□□□□□ -0.82
HLA-DQA1-204ENST00000422863 AIMP1Q12904 312 aaKnown RBP9.93□□□□□ -0.82
HLA-DQA1-204ENST00000422863 NECTIN2Q92692 538 aa9.93□□□□□ -0.82
HLA-DQA1-204ENST00000422863 KCTD12Q96CX2 325 aaKnown RBP9.93□□□□□ -0.82
HLA-DQA1-204ENST00000422863 CIZ1Q9ULV3 898 aaPredicted RBP9.93□□□□□ -0.82
HLA-DQA1-204ENST00000422863 RBBP6Q7Z6E9 1792 aaKnown RBP9.93□□□□□ -0.82
HLA-DQA1-204ENST00000422863 HTTP42858 3142 aa9.92□□□□□ -0.82
HLA-DQA1-204ENST00000422863 TTLL12Q14166 644 aaPredicted RBP9.92□□□□□ -0.82
HLA-DQA1-204ENST00000422863 PROSER3Q2NL68 480 aa9.92□□□□□ -0.82
HLA-DQA1-204ENST00000422863 NLRP10Q86W26 655 aa9.92□□□□□ -0.82
HLA-DQA1-204ENST00000422863 CELF1Q92879 486 aaKnown RBP9.92□□□□□ -0.82
HLA-DQA1-204ENST00000422863 TRMT112Q9UI30 125 aaKnown RBP9.92□□□□□ -0.82
HLA-DQA1-204ENST00000422863 TRIOBPQ9H2D6 2365 aa9.92□□□□□ -0.82
HLA-DQA1-204ENST00000422863 HTATSF1O43719 755 aaKnown RBP9.91□□□□□ -0.82
HLA-DQA1-204ENST00000422863 FKTNO75072 461 aa9.91□□□□□ -0.82
HLA-DQA1-204ENST00000422863 PRKG1Q13976 671 aa9.91□□□□□ -0.82
HLA-DQA1-204ENST00000422863 PDIA6Q15084 440 aa9.91□□□□□ -0.82
HLA-DQA1-204ENST00000422863 CFAP53Q96M91 514 aa9.91□□□□□ -0.82
HLA-DQA1-204ENST00000422863 NUDCQ9Y266 331 aa9.91□□□□□ -0.82
HLA-DQA1-204ENST00000422863 SPEF2Q9C093 1822 aa9.91□□□□□ -0.82
HLA-DQA1-204ENST00000422863 VIL1P09327 827 aaKnown RBP9.9□□□□□ -0.82
HLA-DQA1-204ENST00000422863 EN2P19622 333 aaPredicted RBP9.9□□□□□ -0.82
HLA-DQA1-204ENST00000422863 RPS12P25398 132 aaKnown RBP9.9□□□□□ -0.82
HLA-DQA1-204ENST00000422863 TM4SF4P48230 202 aa9.9□□□□□ -0.82
HLA-DQA1-204ENST00000422863 RTL5Q5HYW3 569 aaPredicted RBP9.9□□□□□ -0.82
HLA-DQA1-204ENST00000422863 COPS6Q7L5N1 327 aa9.9□□□□□ -0.82
HLA-DQA1-204ENST00000422863 TRIM17Q9Y577 477 aa9.9□□□□□ -0.82
HLA-DQA1-204ENST00000422863 LRP10Q7Z4F1 713 aa9.89□□□□□ -0.83
HLA-DQA1-204ENST00000422863 TBC1D16Q8TBP0 767 aa9.89□□□□□ -0.83
HLA-DQA1-204ENST00000422863 PNISRQ8TF01 805 aaKnown RBP9.89□□□□□ -0.83
HLA-DQA1-204ENST00000422863 XAGE3Q8WTP9 111 aa9.89□□□□□ -0.83
HLA-DQA1-204ENST00000422863 FZD1Q9UP38 647 aa9.89□□□□□ -0.83
HLA-DQA1-204ENST00000422863 SH3TC1Q8TE82 1336 aa9.88□□□□□ -0.83
HLA-DQA1-204ENST00000422863 TCIRG1Q13488 830 aa9.88□□□□□ -0.83
HLA-DQA1-204ENST00000422863 NBPF9Q3BBW0 867 aa9.88□□□□□ -0.83
HLA-DQA1-204ENST00000422863 FAM89AQ96GI7 184 aa9.88□□□□□ -0.83
HLA-DQA1-204ENST00000422863 EYA3Q99504 573 aa9.88□□□□□ -0.83
HLA-DQA1-204ENST00000422863 ZC3H12CQ9C0D7 883 aaKnown RBP9.88□□□□□ -0.83
HLA-DQA1-204ENST00000422863 MYOZ2Q9NPC6 264 aa9.88□□□□□ -0.83
HLA-DQA1-204ENST00000422863 PCDHGA4Q9Y5G9 962 aa9.88□□□□□ -0.83
HLA-DQA1-204ENST00000422863 ZNF646O15015 1829 aaPredicted RBP9.87□□□□□ -0.83
HLA-DQA1-204ENST00000422863 FKBP1BP68106 108 aa9.87□□□□□ -0.83
HLA-DQA1-204ENST00000422863 PTPN12Q05209 780 aaKnown RBP9.87□□□□□ -0.83
HLA-DQA1-204ENST00000422863 DMRTA1Q5VZB9 504 aa9.87□□□□□ -0.83
HLA-DQA1-204ENST00000422863 RSBN1LQ6PCB5 846 aaPredicted RBP9.87□□□□□ -0.83
HLA-DQA1-204ENST00000422863 OTOP1Q7RTM1 612 aa9.87□□□□□ -0.83
HLA-DQA1-204ENST00000422863 TMC4Q7Z404 712 aa9.87□□□□□ -0.83
HLA-DQA1-204ENST00000422863 MXD3Q9BW11 206 aa9.87□□□□□ -0.83
HLA-DQA1-204ENST00000422863 TSPYL4Q9UJ04 414 aa9.87□□□□□ -0.83
HLA-DQA1-204ENST00000422863 ATP5J2-PTCD1G3V325 749 aa9.86□□□□□ -0.83
HLA-DQA1-204ENST00000422863 DLL1O00548 723 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms