RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 KIF3AQ9Y496 699 aa18.57■□□□□ 0.56
CDH1-202ENST00000422392 ADAMTSL3P82987 1691 aa18.57■□□□□ 0.56
CDH1-202ENST00000422392 RIOK3O14730 519 aaKnown RBP18.57■□□□□ 0.56
CDH1-202ENST00000422392 ZMYM1Q5SVZ6 1142 aa18.57■□□□□ 0.56
CDH1-202ENST00000422392 HELLSQ9NRZ9 838 aa18.57■□□□□ 0.56
CDH1-202ENST00000422392 TJP1Q07157 1748 aa18.57■□□□□ 0.56
CDH1-202ENST00000422392 PKD1L3Q7Z443 1732 aa18.57■□□□□ 0.56
CDH1-202ENST00000422392 GTF2F1P35269 517 aaKnown RBP eCLIP18.56■□□□□ 0.56
CDH1-202ENST00000422392 HAND2P61296 217 aa18.56■□□□□ 0.56
CDH1-202ENST00000422392 FKBP4Q02790 459 aaKnown RBP eCLIP18.56■□□□□ 0.56
CDH1-202ENST00000422392 HSP90AB3PQ58FF7 597 aa18.56■□□□□ 0.56
CDH1-202ENST00000422392 FBXW7Q969H0 707 aa18.56■□□□□ 0.56
CDH1-202ENST00000422392 CCDC144BQ3MJ40 725 aa18.56■□□□□ 0.56
CDH1-202ENST00000422392 CCDC144CPQ8IYA2 1237 aa18.56■□□□□ 0.56
CDH1-202ENST00000422392 DSCC1Q9BVC3 393 aa18.56■□□□□ 0.56
CDH1-202ENST00000422392 ZNF330Q9Y3S2 320 aaPredicted RBP18.56■□□□□ 0.56
CDH1-202ENST00000422392 MST1RQ04912 1400 aa18.55■□□□□ 0.56
CDH1-202ENST00000422392 HMGB1P09429 215 aaKnown RBP18.55■□□□□ 0.56
CDH1-202ENST00000422392 ILDR1Q86SU0 546 aaPredicted RBP18.55■□□□□ 0.56
CDH1-202ENST00000422392 C16orf45Q96MC5 204 aaPredicted RBP18.55■□□□□ 0.56
CDH1-202ENST00000422392 BCL2L12Q9HB09 334 aa18.55■□□□□ 0.56
CDH1-202ENST00000422392 EYA2O00167 538 aa18.55■□□□□ 0.56
CDH1-202ENST00000422392 PDIA3P30101 505 aaKnown RBP18.55■□□□□ 0.56
CDH1-202ENST00000422392 IL15P40933 162 aaPredicted RBP18.55■□□□□ 0.56
CDH1-202ENST00000422392 OTUD7BQ6GQQ9 843 aa18.55■□□□□ 0.56
CDH1-202ENST00000422392 RAB11FIP4Q86YS3 637 aa18.55■□□□□ 0.56
CDH1-202ENST00000422392 OSBP2Q969R2 916 aa18.55■□□□□ 0.56
CDH1-202ENST00000422392 LLPHQ9BRT6 129 aaKnown RBP18.55■□□□□ 0.56
CDH1-202ENST00000422392 CLIP2Q9UDT6 1046 aa18.55■□□□□ 0.56
CDH1-202ENST00000422392 NUP188Q5SRE5 1749 aa18.55■□□□□ 0.56
CDH1-202ENST00000422392 ZSCAN25Q6NSZ9 544 aa18.54■□□□□ 0.56
CDH1-202ENST00000422392 MTERF4Q7Z6M4 381 aaKnown RBP18.54■□□□□ 0.56
CDH1-202ENST00000422392 SNW1Q13573 536 aaKnown RBP18.54■□□□□ 0.56
CDH1-202ENST00000422392 RCOR1Q9UKL0 485 aa18.54■□□□□ 0.56
CDH1-202ENST00000422392 RNF113AO15541 343 aaKnown RBP18.53■□□□□ 0.56
CDH1-202ENST00000422392 ADORA1P30542 326 aa18.53■□□□□ 0.56
CDH1-202ENST00000422392 ARID5BQ14865 1188 aa18.53■□□□□ 0.56
CDH1-202ENST00000422392 IQCB1Q15051 598 aa18.53■□□□□ 0.56
CDH1-202ENST00000422392 NAA16Q6N069 864 aaPredicted RBP18.53■□□□□ 0.56
CDH1-202ENST00000422392 CACTINQ8WUQ7 758 aaKnown RBP18.53■□□□□ 0.56
CDH1-202ENST00000422392 AGXT2Q9BYV1 514 aa18.53■□□□□ 0.56
CDH1-202ENST00000422392 TMEM94Q12767 1356 aa18.53■□□□□ 0.56
CDH1-202ENST00000422392 SALL1Q9NSC2 1324 aa18.53■□□□□ 0.56
CDH1-202ENST00000422392 ME1P48163 572 aa18.53■□□□□ 0.56
CDH1-202ENST00000422392 FDPSP14324 419 aaKnown RBP18.52■□□□□ 0.56
CDH1-202ENST00000422392 CHAF1AQ13111 956 aaPredicted RBP18.52■□□□□ 0.56
CDH1-202ENST00000422392 NWD2Q9ULI1 1742 aa18.52■□□□□ 0.56
CDH1-202ENST00000422392 PI16Q6UXB8 463 aa18.52■□□□□ 0.56
CDH1-202ENST00000422392 GJB4Q9NTQ9 266 aa18.52■□□□□ 0.56
CDH1-202ENST00000422392 CARMIL3Q8ND23 1372 aa18.52■□□□□ 0.55
CDH1-202ENST00000422392 GOLGA6L19H0YKK7 550 aa18.51■□□□□ 0.55
CDH1-202ENST00000422392 WASHC4Q2M389 1173 aa18.51■□□□□ 0.55
CDH1-202ENST00000422392 FSIP1Q8NA03 581 aa18.51■□□□□ 0.55
CDH1-202ENST00000422392 FOXP2O15409 715 aa18.51■□□□□ 0.55
CDH1-202ENST00000422392 SCARF1Q14162 830 aa18.51■□□□□ 0.55
CDH1-202ENST00000422392 CCDC73Q6ZRK6 1079 aa18.51■□□□□ 0.55
CDH1-202ENST00000422392 BCL11BQ9C0K0 894 aaPredicted RBP18.51■□□□□ 0.55
CDH1-202ENST00000422392 GPR108Q9NPR9 543 aa18.5■□□□□ 0.55
CDH1-202ENST00000422392 TAOK2Q9UL54 1235 aa18.5■□□□□ 0.55
CDH1-202ENST00000422392 PRDM10Q9NQV6 1147 aa18.5■□□□□ 0.55
CDH1-202ENST00000422392 TNS3Q68CZ2 1445 aa18.5■□□□□ 0.55
CDH1-202ENST00000422392 A0A1B0GVL5 298 aa18.49■□□□□ 0.55
CDH1-202ENST00000422392 KINO60870 393 aaKnown RBP18.49■□□□□ 0.55
CDH1-202ENST00000422392 POLR3DP05423 398 aaPredicted RBP18.49■□□□□ 0.55
CDH1-202ENST00000422392 STX1AQ16623 288 aa18.49■□□□□ 0.55
CDH1-202ENST00000422392 GORABQ5T7V8 394 aa18.49■□□□□ 0.55
CDH1-202ENST00000422392 TOM1L2Q6ZVM7 507 aa18.49■□□□□ 0.55
CDH1-202ENST00000422392 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.49■□□□□ 0.55
CDH1-202ENST00000422392 CCDC191Q8NCU4 936 aa18.49■□□□□ 0.55
CDH1-202ENST00000422392 ENGASEQ8NFI3 743 aa18.49■□□□□ 0.55
CDH1-202ENST00000422392 ZCRB1Q8TBF4 217 aaKnown RBP18.49■□□□□ 0.55
CDH1-202ENST00000422392 CCDC94Q9BW85 323 aaPredicted RBP18.49■□□□□ 0.55
CDH1-202ENST00000422392 ZNF274Q96GC6 653 aaPredicted RBP18.49■□□□□ 0.55
CDH1-202ENST00000422392 CEP126Q9P2H0 1117 aa18.49■□□□□ 0.55
CDH1-202ENST00000422392 PCDHA7Q9UN72 937 aa18.49■□□□□ 0.55
CDH1-202ENST00000422392 STRCP1A6NGW2 1772 aa18.48■□□□□ 0.55
CDH1-202ENST00000422392 FAM160A1Q05DH4 1040 aa18.48■□□□□ 0.55
CDH1-202ENST00000422392 TTC39AQ5SRH9 613 aa18.48■□□□□ 0.55
CDH1-202ENST00000422392 XAGE2Q96GT9 111 aa18.48■□□□□ 0.55
CDH1-202ENST00000422392 ZNF396Q96N95 335 aaPredicted RBP18.48■□□□□ 0.55
CDH1-202ENST00000422392 KAT6BQ8WYB5 2073 aa18.48■□□□□ 0.55
CDH1-202ENST00000422392 BECN2A8MW95 431 aa18.48■□□□□ 0.55
CDH1-202ENST00000422392 DHX40Q8IX18 779 aaKnown RBP18.48■□□□□ 0.55
CDH1-202ENST00000422392 PUS7LQ9H0K6 701 aaKnown RBP18.48■□□□□ 0.55
CDH1-202ENST00000422392 FGAP02671 866 aa18.47■□□□□ 0.55
CDH1-202ENST00000422392 CCDC57Q2TAC2 916 aa18.47■□□□□ 0.55
CDH1-202ENST00000422392 SYNE4Q8N205 404 aa18.47■□□□□ 0.55
CDH1-202ENST00000422392 FAM89AQ96GI7 184 aa18.47■□□□□ 0.55
CDH1-202ENST00000422392 CLIC4Q9Y696 253 aa18.47■□□□□ 0.55
CDH1-202ENST00000422392 UBR2Q8IWV8 1755 aa18.47■□□□□ 0.55
CDH1-202ENST00000422392 ZAP70P43403 619 aa18.47■□□□□ 0.55
CDH1-202ENST00000422392 PPP4R3BQ5MIZ7 849 aa18.47■□□□□ 0.55
CDH1-202ENST00000422392 DENND2AQ9ULE3 1009 aa18.47■□□□□ 0.55
CDH1-202ENST00000422392 PCDH11XQ9BZA7 1347 aa18.47■□□□□ 0.55
CDH1-202ENST00000422392 PCDH11YQ9BZA8 1340 aa18.47■□□□□ 0.55
CDH1-202ENST00000422392 ABCC6O95255 1503 aa18.47■□□□□ 0.55
CDH1-202ENST00000422392 USP27XA6NNY8 438 aa18.46■□□□□ 0.55
CDH1-202ENST00000422392 TNNT1P13805 278 aa18.46■□□□□ 0.55
CDH1-202ENST00000422392 CCDC158Q5M9N0 1113 aa18.46■□□□□ 0.55
CDH1-202ENST00000422392 FILIP1Q7Z7B0 1213 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms