RNA–Protein interactions for RNA: ENST00000421914.5

NCSTN-203, Transcript of nicastrin, humanhuman

TSL 4

Gene NCSTN, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-203ENST00000421914 PODXL2Q9NZ53 605 aa17.72■□□□□ 0.43
NCSTN-203ENST00000421914 ZNF609O15014 1411 aa17.72■□□□□ 0.43
NCSTN-203ENST00000421914 IGF2BP3O00425 579 aaKnown RBP eCLIP17.71■□□□□ 0.43
NCSTN-203ENST00000421914 OGFOD1Q8N543 542 aa17.71■□□□□ 0.43
NCSTN-203ENST00000421914 MXD3Q9BW11 206 aa17.71■□□□□ 0.43
NCSTN-203ENST00000421914 WNT10BO00744 389 aa17.7■□□□□ 0.42
NCSTN-203ENST00000421914 CRHR2Q13324 411 aa17.7■□□□□ 0.42
NCSTN-203ENST00000421914 LDLRAD1Q5T700 205 aa17.7■□□□□ 0.42
NCSTN-203ENST00000421914 ZNF333Q96JL9 665 aa17.7■□□□□ 0.42
NCSTN-203ENST00000421914 SEC31BQ9NQW1 1179 aa17.7■□□□□ 0.42
NCSTN-203ENST00000421914 IRS4O14654 1257 aaPredicted RBP17.69■□□□□ 0.42
NCSTN-203ENST00000421914 PPP2R1AP30153 589 aa17.69■□□□□ 0.42
NCSTN-203ENST00000421914 NFE2L2Q16236 605 aa17.69■□□□□ 0.42
NCSTN-203ENST00000421914 SLC9C1Q4G0N8 1177 aa17.69■□□□□ 0.42
NCSTN-203ENST00000421914 RBM27Q9P2N5 1060 aaKnown RBP17.69■□□□□ 0.42
NCSTN-203ENST00000421914 SP3Q02447 781 aa17.68■□□□□ 0.42
NCSTN-203ENST00000421914 PODNQ7Z5L7 613 aa17.68■□□□□ 0.42
NCSTN-203ENST00000421914 NBPF11Q86T75 865 aa17.68■□□□□ 0.42
NCSTN-203ENST00000421914 WNK4Q96J92 1243 aa17.68■□□□□ 0.42
NCSTN-203ENST00000421914 CLMNQ96JQ2 1002 aa17.68■□□□□ 0.42
NCSTN-203ENST00000421914 A0A0C4DFX4 3053 aa17.68■□□□□ 0.42
NCSTN-203ENST00000421914 PSME4Q14997 1843 aa17.68■□□□□ 0.42
NCSTN-203ENST00000421914 CAP1Q01518 475 aa17.67■□□□□ 0.42
NCSTN-203ENST00000421914 OTUD7BQ6GQQ9 843 aa17.67■□□□□ 0.42
NCSTN-203ENST00000421914 APOBEC3FQ8IUX4 373 aaKnown RBP17.67■□□□□ 0.42
NCSTN-203ENST00000421914 DPF3Q92784 378 aa17.67■□□□□ 0.42
NCSTN-203ENST00000421914 RANBP2P49792 3224 aaKnown RBP17.66■□□□□ 0.42
NCSTN-203ENST00000421914 ZBTB48P10074 688 aaPredicted RBP17.66■□□□□ 0.42
NCSTN-203ENST00000421914 CCDC85AQ96PX6 553 aaPredicted RBP17.66■□□□□ 0.42
NCSTN-203ENST00000421914 ISCA1Q9BUE6 129 aa17.66■□□□□ 0.42
NCSTN-203ENST00000421914 PTCH2Q9Y6C5 1203 aa17.66■□□□□ 0.42
NCSTN-203ENST00000421914 CLSPNQ9HAW4 1339 aa17.66■□□□□ 0.42
NCSTN-203ENST00000421914 ANKRD13DQ6ZTN6 518 aa17.65■□□□□ 0.42
NCSTN-203ENST00000421914 PLBD2Q8NHP8 589 aa17.65■□□□□ 0.42
NCSTN-203ENST00000421914 XDHP47989 1333 aa17.65■□□□□ 0.42
NCSTN-203ENST00000421914 ATP2B4P23634 1241 aa17.64■□□□□ 0.41
NCSTN-203ENST00000421914 DACT2Q5SW24 774 aa17.64■□□□□ 0.41
NCSTN-203ENST00000421914 CHPF2Q9P2E5 772 aa17.64■□□□□ 0.41
NCSTN-203ENST00000421914 MAPK8IP3Q9UPT6 1336 aa17.64■□□□□ 0.41
NCSTN-203ENST00000421914 WTIPA6NIX2 430 aaPredicted RBP17.63■□□□□ 0.41
NCSTN-203ENST00000421914 PPP1R12BO60237 982 aaPredicted RBP17.62■□□□□ 0.41
NCSTN-203ENST00000421914 ARHGEF6Q15052 776 aa17.62■□□□□ 0.41
NCSTN-203ENST00000421914 CCDC152Q4G0S7 254 aa17.62■□□□□ 0.41
NCSTN-203ENST00000421914 KIAA0825Q8IV33 1275 aa17.62■□□□□ 0.41
NCSTN-203ENST00000421914 DEFB129Q9H1M3 183 aa17.62■□□□□ 0.41
NCSTN-203ENST00000421914 MYO3BQ8WXR4 1341 aa17.62■□□□□ 0.41
NCSTN-203ENST00000421914 KRT24Q2M2I5 525 aa17.61■□□□□ 0.41
NCSTN-203ENST00000421914 SH3TC2Q8TF17 1288 aa17.61■□□□□ 0.41
NCSTN-203ENST00000421914 PLEKHF1Q96S99 279 aa17.61■□□□□ 0.41
NCSTN-203ENST00000421914 COL6A3P12111 3177 aa17.61■□□□□ 0.41
NCSTN-203ENST00000421914 STRIP1Q5VSL9 837 aa17.6■□□□□ 0.41
NCSTN-203ENST00000421914 ANKRD18AQ8IVF6 992 aa17.6■□□□□ 0.41
NCSTN-203ENST00000421914 PTPN18Q99952 460 aa17.6■□□□□ 0.41
NCSTN-203ENST00000421914 GJA5P36382 358 aa17.59■□□□□ 0.41
NCSTN-203ENST00000421914 TRIM26Q12899 539 aaPredicted RBP17.59■□□□□ 0.41
NCSTN-203ENST00000421914 MAP3K11Q16584 847 aa17.59■□□□□ 0.41
NCSTN-203ENST00000421914 JARID2Q92833 1246 aaPredicted RBP17.59■□□□□ 0.41
NCSTN-203ENST00000421914 MED23Q9ULK4 1368 aa17.58■□□□□ 0.4
NCSTN-203ENST00000421914 HSP90B1P14625 803 aaKnown RBP17.58■□□□□ 0.4
NCSTN-203ENST00000421914 HDGFL1Q5TGJ6 251 aa17.58■□□□□ 0.4
NCSTN-203ENST00000421914 ZBTB38Q8NAP3 1195 aaPredicted RBP17.58■□□□□ 0.4
NCSTN-203ENST00000421914 IREB2P48200 963 aaKnown RBP17.57■□□□□ 0.4
NCSTN-203ENST00000421914 RIPK4P57078 832 aa17.57■□□□□ 0.4
NCSTN-203ENST00000421914 TAF1CQ15572 869 aaPredicted RBP17.57■□□□□ 0.4
NCSTN-203ENST00000421914 TTLL5Q6EMB2 1281 aa17.57■□□□□ 0.4
NCSTN-203ENST00000421914 SSC5DA1L4H1 1573 aa17.57■□□□□ 0.4
NCSTN-203ENST00000421914 ECM2O94769 699 aaPredicted RBP17.56■□□□□ 0.4
NCSTN-203ENST00000421914 MNX1P50219 401 aaPredicted RBP17.56■□□□□ 0.4
NCSTN-203ENST00000421914 DLGAP5Q15398 846 aa17.56■□□□□ 0.4
NCSTN-203ENST00000421914 SUPT20HL1Q3ZLR7 823 aa17.56■□□□□ 0.4
NCSTN-203ENST00000421914 COA1Q9GZY4 146 aa17.56■□□□□ 0.4
NCSTN-203ENST00000421914 ELP3Q9H9T3 547 aa17.56■□□□□ 0.4
NCSTN-203ENST00000421914 ZFYVE28Q9HCC9 887 aa17.56■□□□□ 0.4
NCSTN-203ENST00000421914 BABAM1Q9NWV8 329 aa17.56■□□□□ 0.4
NCSTN-203ENST00000421914 COL1A1P02452 1464 aaPredicted RBP17.56■□□□□ 0.4
NCSTN-203ENST00000421914 CLRN2A0PK11 232 aa17.55■□□□□ 0.4
NCSTN-203ENST00000421914 PDE8AO60658 829 aa17.55■□□□□ 0.4
NCSTN-203ENST00000421914 MMP14P50281 582 aa17.55■□□□□ 0.4
NCSTN-203ENST00000421914 TRIM28Q13263 835 aaKnown RBP17.55■□□□□ 0.4
NCSTN-203ENST00000421914 NBPF12Q5TAG4 269 aaPredicted RBP17.55■□□□□ 0.4
NCSTN-203ENST00000421914 RIC3Q7Z5B4 369 aa17.55■□□□□ 0.4
NCSTN-203ENST00000421914 ZBED3Q96IU2 234 aaPredicted RBP17.55■□□□□ 0.4
NCSTN-203ENST00000421914 PNNQ9H307 717 aaKnown RBP17.55■□□□□ 0.4
NCSTN-203ENST00000421914 LAS1LQ9Y4W2 734 aaKnown RBP17.55■□□□□ 0.4
NCSTN-203ENST00000421914 TESPA1A2RU30 521 aaPredicted RBP17.54■□□□□ 0.4
NCSTN-203ENST00000421914 GTF2IP78347 998 aa17.54■□□□□ 0.4
NCSTN-203ENST00000421914 ANKRD13AQ8IZ07 590 aa17.54■□□□□ 0.4
NCSTN-203ENST00000421914 OPTNQ96CV9 577 aa17.54■□□□□ 0.4
NCSTN-203ENST00000421914 SHISA4Q96DD7 197 aa17.54■□□□□ 0.4
NCSTN-203ENST00000421914 LRCH3Q96II8 777 aa17.54■□□□□ 0.4
NCSTN-203ENST00000421914 HTATIP2Q9BUP3 242 aa17.54■□□□□ 0.4
NCSTN-203ENST00000421914 ARHGAP39Q9C0H5 1083 aa17.54■□□□□ 0.4
NCSTN-203ENST00000421914 VEZTQ9HBM0 779 aa17.54■□□□□ 0.4
NCSTN-203ENST00000421914 DBF4Q9UBU7 674 aaPredicted RBP17.54■□□□□ 0.4
NCSTN-203ENST00000421914 NR2E3Q9Y5X4 410 aa17.54■□□□□ 0.4
NCSTN-203ENST00000421914 UNCXA6NJT0 531 aa17.53■□□□□ 0.4
NCSTN-203ENST00000421914 SOX1O00570 391 aaPredicted RBP17.53■□□□□ 0.4
NCSTN-203ENST00000421914 USP2O75604 605 aaPredicted RBP17.53■□□□□ 0.4
NCSTN-203ENST00000421914 CCT4P50991 539 aaKnown RBP17.53■□□□□ 0.4
NCSTN-203ENST00000421914 KIF22Q14807 665 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms