RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.26□□□□□ -1.25
PTP4A1P1-201ENST00000420539 TTF2Q9UNY4 1162 aaKnown RBP7.26□□□□□ -1.25
PTP4A1P1-201ENST00000420539 PCDHGB7Q9Y5F8 929 aa7.26□□□□□ -1.25
PTP4A1P1-201ENST00000420539 EPB42P16452 691 aa7.25□□□□□ -1.25
PTP4A1P1-201ENST00000420539 VEGFBP49765 207 aa7.25□□□□□ -1.25
PTP4A1P1-201ENST00000420539 EVA1CP58658 441 aa7.25□□□□□ -1.25
PTP4A1P1-201ENST00000420539 SFSWAPQ12872 951 aaKnown RBP7.25□□□□□ -1.25
PTP4A1P1-201ENST00000420539 FIGNL1Q6PIW4 674 aa7.25□□□□□ -1.25
PTP4A1P1-201ENST00000420539 TRIM22Q8IYM9 498 aa7.25□□□□□ -1.25
PTP4A1P1-201ENST00000420539 CNPY4Q8N129 248 aa7.25□□□□□ -1.25
PTP4A1P1-201ENST00000420539 ZNF837Q96EG3 531 aaPredicted RBP7.25□□□□□ -1.25
PTP4A1P1-201ENST00000420539 ABHD17AQ96GS6 310 aa7.25□□□□□ -1.25
PTP4A1P1-201ENST00000420539 C8orf48Q96LL4 319 aa7.25□□□□□ -1.25
PTP4A1P1-201ENST00000420539 FRMD6Q96NE9 622 aa7.25□□□□□ -1.25
PTP4A1P1-201ENST00000420539 NIF3L1Q9GZT8 377 aa7.25□□□□□ -1.25
PTP4A1P1-201ENST00000420539 GGNBP2Q9H3C7 697 aa7.25□□□□□ -1.25
PTP4A1P1-201ENST00000420539 BSDC1Q9NW68 430 aaPredicted RBP7.25□□□□□ -1.25
PTP4A1P1-201ENST00000420539 WWC3Q9ULE0 1092 aa7.25□□□□□ -1.25
PTP4A1P1-201ENST00000420539 UBAP1LF5GYI3 381 aa7.24□□□□□ -1.25
PTP4A1P1-201ENST00000420539 GPR25O00155 361 aa7.24□□□□□ -1.25
PTP4A1P1-201ENST00000420539 GPR182O15218 404 aa7.24□□□□□ -1.25
PTP4A1P1-201ENST00000420539 PPFIA3O75145 1194 aa7.24□□□□□ -1.25
PTP4A1P1-201ENST00000420539 GRNP28799 593 aaKnown RBP7.24□□□□□ -1.25
PTP4A1P1-201ENST00000420539 USP5P45974 858 aa7.24□□□□□ -1.25
PTP4A1P1-201ENST00000420539 PLCB3Q01970 1234 aa7.24□□□□□ -1.25
PTP4A1P1-201ENST00000420539 TRIP4Q15650 581 aaPredicted RBP7.24□□□□□ -1.25
PTP4A1P1-201ENST00000420539 SAMD5Q5TGI4 173 aa7.24□□□□□ -1.25
PTP4A1P1-201ENST00000420539 CKAP2LQ8IYA6 745 aa7.24□□□□□ -1.25
PTP4A1P1-201ENST00000420539 GJD3Q8N144 294 aa7.24□□□□□ -1.25
PTP4A1P1-201ENST00000420539 VWA5B2Q8N398 1253 aa7.24□□□□□ -1.25
PTP4A1P1-201ENST00000420539 PRPF38AQ8NAV1 312 aaKnown RBP7.24□□□□□ -1.25
PTP4A1P1-201ENST00000420539 MKL1Q969V6 931 aa7.24□□□□□ -1.25
PTP4A1P1-201ENST00000420539 MTA3Q9BTC8 594 aa7.24□□□□□ -1.25
PTP4A1P1-201ENST00000420539 IER2Q9BTL4 223 aa7.24□□□□□ -1.25
PTP4A1P1-201ENST00000420539 TCEAL9Q9UHQ7 104 aa7.24□□□□□ -1.25
PTP4A1P1-201ENST00000420539 PCDHGC4Q9Y5F7 938 aa7.24□□□□□ -1.25
PTP4A1P1-201ENST00000420539 CCDC189A1A4V9 331 aa7.23□□□□□ -1.25
PTP4A1P1-201ENST00000420539 BNIP3LO60238 219 aa7.23□□□□□ -1.25
PTP4A1P1-201ENST00000420539 EHHADHQ08426 723 aa7.23□□□□□ -1.25
PTP4A1P1-201ENST00000420539 UBE4AQ14139 1066 aa7.23□□□□□ -1.25
PTP4A1P1-201ENST00000420539 LBRQ14739 615 aaKnown RBP7.23□□□□□ -1.25
PTP4A1P1-201ENST00000420539 GRIN2CQ14957 1233 aa7.23□□□□□ -1.25
PTP4A1P1-201ENST00000420539 ENOX2Q16206 610 aaKnown RBP7.23□□□□□ -1.25
PTP4A1P1-201ENST00000420539 MAP9Q49MG5 647 aa7.23□□□□□ -1.25
PTP4A1P1-201ENST00000420539 NBPF6Q5VWK0 638 aa7.23□□□□□ -1.25
PTP4A1P1-201ENST00000420539 KRT25Q7Z3Z0 450 aa7.23□□□□□ -1.25
PTP4A1P1-201ENST00000420539 NBPF4Q96M43 638 aa7.23□□□□□ -1.25
PTP4A1P1-201ENST00000420539 CITED4Q96RK1 184 aa7.23□□□□□ -1.25
PTP4A1P1-201ENST00000420539 STRN4Q9NRL3 753 aa7.23□□□□□ -1.25
PTP4A1P1-201ENST00000420539 KCNH4Q9UQ05 1017 aa7.23□□□□□ -1.25
PTP4A1P1-201ENST00000420539 KCNMB2Q9Y691 235 aa7.23□□□□□ -1.25
PTP4A1P1-201ENST00000420539 COMMD10Q9Y6G5 202 aa7.23□□□□□ -1.25
PTP4A1P1-201ENST00000420539 XYLBO75191 536 aa7.22□□□□□ -1.25
PTP4A1P1-201ENST00000420539 KIF4AO95239 1232 aa7.22□□□□□ -1.25
PTP4A1P1-201ENST00000420539 MAPTP10636 758 aaKnown RBP7.22□□□□□ -1.25
PTP4A1P1-201ENST00000420539 ATF4P18848 351 aaPredicted RBP7.22□□□□□ -1.25
PTP4A1P1-201ENST00000420539 CD33P20138 364 aa7.22□□□□□ -1.25
PTP4A1P1-201ENST00000420539 UBAP2LQ14157 1087 aaKnown RBP7.22□□□□□ -1.25
PTP4A1P1-201ENST00000420539 ZNF438Q7Z4V0 828 aa7.22□□□□□ -1.25
PTP4A1P1-201ENST00000420539 USP48Q86UV5 1035 aa7.22□□□□□ -1.25
PTP4A1P1-201ENST00000420539 SCYL1Q96KG9 808 aa7.22□□□□□ -1.25
PTP4A1P1-201ENST00000420539 DMRTB1Q96MA1 342 aa7.22□□□□□ -1.25
PTP4A1P1-201ENST00000420539 SETDB2Q96T68 719 aa7.22□□□□□ -1.25
PTP4A1P1-201ENST00000420539 FAM129BQ96TA1 746 aa7.22□□□□□ -1.25
PTP4A1P1-201ENST00000420539 SLKQ9H2G2 1235 aaPredicted RBP7.22□□□□□ -1.25
PTP4A1P1-201ENST00000420539 SRA1Q9HD15 236 aaKnown RBP7.22□□□□□ -1.25
PTP4A1P1-201ENST00000420539 FNDC3AQ9Y2H6 1198 aaKnown RBP7.22□□□□□ -1.25
PTP4A1P1-201ENST00000420539 FAM157BP0CG42 384 aa7.21□□□□□ -1.26
PTP4A1P1-201ENST00000420539 TNP2Q05952 138 aa7.21□□□□□ -1.26
PTP4A1P1-201ENST00000420539 RAB44Q7Z6P3 723 aaPredicted RBP7.21□□□□□ -1.26
PTP4A1P1-201ENST00000420539 FERMT3Q86UX7 667 aa7.21□□□□□ -1.26
PTP4A1P1-201ENST00000420539 TMX1Q9H3N1 280 aa7.21□□□□□ -1.26
PTP4A1P1-201ENST00000420539 THRAP3Q9Y2W1 955 aaKnown RBP7.21□□□□□ -1.26
PTP4A1P1-201ENST00000420539 EFSO43281 561 aa7.2□□□□□ -1.26
PTP4A1P1-201ENST00000420539 SASH3O75995 380 aa7.2□□□□□ -1.26
PTP4A1P1-201ENST00000420539 RPLP1P05386 114 aaKnown RBP7.2□□□□□ -1.26
PTP4A1P1-201ENST00000420539 VIL1P09327 827 aaKnown RBP7.2□□□□□ -1.26
PTP4A1P1-201ENST00000420539 GJA8P48165 433 aa7.2□□□□□ -1.26
PTP4A1P1-201ENST00000420539 GYS2P54840 703 aa7.2□□□□□ -1.26
PTP4A1P1-201ENST00000420539 ATP2B2Q01814 1243 aa7.2□□□□□ -1.26
PTP4A1P1-201ENST00000420539 ORC1Q13415 861 aa7.2□□□□□ -1.26
PTP4A1P1-201ENST00000420539 CCSAPQ6IQ19 270 aaPredicted RBP7.2□□□□□ -1.26
PTP4A1P1-201ENST00000420539 FOXR1Q6PIV2 292 aa7.2□□□□□ -1.26
PTP4A1P1-201ENST00000420539 IL17RAQ96F46 866 aa7.2□□□□□ -1.26
PTP4A1P1-201ENST00000420539 TRERF1Q96PN7 1200 aa7.2□□□□□ -1.26
PTP4A1P1-201ENST00000420539 SRPK1Q96SB4 655 aaKnown RBP7.2□□□□□ -1.26
PTP4A1P1-201ENST00000420539 SENP7Q9BQF6 1050 aa7.2□□□□□ -1.26
PTP4A1P1-201ENST00000420539 MARK1Q9P0L2 795 aa7.2□□□□□ -1.26
PTP4A1P1-201ENST00000420539 FOXD3Q9UJU5 478 aaPredicted RBP7.2□□□□□ -1.26
PTP4A1P1-201ENST00000420539 EID1Q9Y6B2 187 aa7.2□□□□□ -1.26
PTP4A1P1-201ENST00000420539 PNMA6FA0A0J9YX94 578 aa7.19□□□□□ -1.26
PTP4A1P1-201ENST00000420539 CDC45O75419 566 aa7.19□□□□□ -1.26
PTP4A1P1-201ENST00000420539 IGHA2P01877 340 aa7.19□□□□□ -1.26
PTP4A1P1-201ENST00000420539 FGFR3P22607 806 aa7.19□□□□□ -1.26
PTP4A1P1-201ENST00000420539 BDNFP23560 247 aa7.19□□□□□ -1.26
PTP4A1P1-201ENST00000420539 FAM43BQ6ZT52 329 aaPredicted RBP7.19□□□□□ -1.26
PTP4A1P1-201ENST00000420539 SV2AQ7L0J3 742 aa7.19□□□□□ -1.26
PTP4A1P1-201ENST00000420539 GMCL1Q96IK5 515 aa7.19□□□□□ -1.26
PTP4A1P1-201ENST00000420539 PNMA5Q96PV4 448 aa7.19□□□□□ -1.26
PTP4A1P1-201ENST00000420539 C12orf49Q9H741 205 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms