RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 EIF3CLB5ME19 914 aaKnown RBP9.3□□□□□ -0.92
HMGXB4-202ENST00000418170 SRGAP3O43295 1099 aa9.3□□□□□ -0.92
HMGXB4-202ENST00000418170 PPM1EQ8WY54 764 aa9.3□□□□□ -0.92
HMGXB4-202ENST00000418170 EIF3CQ99613 913 aaKnown RBP9.3□□□□□ -0.92
HMGXB4-202ENST00000418170 SNRKQ9NRH2 765 aa9.3□□□□□ -0.92
HMGXB4-202ENST00000418170 MRFAP1Q9Y605 127 aa9.3□□□□□ -0.92
HMGXB4-202ENST00000418170 PPP2R3AQ06190 1150 aa9.3□□□□□ -0.92
HMGXB4-202ENST00000418170 HSP90AB4PQ58FF6 505 aa9.3□□□□□ -0.92
HMGXB4-202ENST00000418170 GNL2Q13823 731 aaKnown RBP9.3□□□□□ -0.92
HMGXB4-202ENST00000418170 DPCR1Q3MIW9 517 aa9.3□□□□□ -0.92
HMGXB4-202ENST00000418170 EVI5LQ96CN4 794 aa9.3□□□□□ -0.92
HMGXB4-202ENST00000418170 ZSCAN12O43309 604 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 CEBPAP49715 358 aaPredicted RBP9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 APOBRQ0VD83 1088 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 BRD3Q15059 726 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 MSL3Q8N5Y2 521 aaKnown RBP9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 ERCC4Q92889 916 aaPredicted RBP9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 TOMM22Q9NS69 142 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 ECHDC1Q9NTX5 307 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 MKRN1Q9UHC7 482 aaKnown RBP9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 VWA3AA6NCI4 1184 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 CORO7P57737 925 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 SUGP1Q8IWZ8 645 aaKnown RBP9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 FSIP1Q8NA03 581 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 FBXW7Q969H0 707 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 DRC1Q96MC2 740 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 FTOQ9C0B1 505 aaKnown RBP eCLIP9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 DEF6Q9H4E7 631 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 VPS18Q9P253 973 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 TRPM3Q9HCF6 1732 aaPredicted RBP9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 PRR36Q9H6K5 1346 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 TXLNAP40222 546 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 ATL3Q6DD88 541 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 FMR1NBQ8N0W7 255 aaPredicted RBP9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 HNRNPLLQ8WVV9 542 aaKnown RBP9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 GOLGA1Q92805 767 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 RNF216Q9NWF9 866 aaPredicted RBP9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 HDAC5Q9UQL6 1122 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 HIP1O00291 1037 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 NCAPHQ15003 741 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 FOXR1Q6PIV2 292 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 FAM227BQ96M60 508 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 KIAA1468Q9P260 1216 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 TAF6LQ9Y6J9 622 aa9.29□□□□□ -0.92
HMGXB4-202ENST00000418170 ABCC6O95255 1503 aa9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 STRCQ7RTU9 1775 aa9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 CPP00450 1065 aa9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 NAA16Q6N069 864 aaPredicted RBP9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 USP28Q96RU2 1077 aa9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 UTP14AQ9BVJ6 771 aaKnown RBP9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 CLASRPQ8N2M8 674 aaKnown RBP9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 SDF4Q9BRK5 362 aa9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 PDE11AQ9HCR9 933 aa9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 HMG20BQ9P0W2 317 aa9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 LRRC37A3O60309 1634 aa9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 PHRF1Q9P1Y6 1649 aaKnown RBP9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 GOLGA6L9A6NEM1 432 aa9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 FANCCQ00597 558 aa9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 NMIQ13287 307 aaPredicted RBP9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 ZRSR1Q15695 479 aaKnown RBP9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 SWT1Q5T5J6 900 aaKnown RBP9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 GPATCH3Q96I76 525 aa9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 WDR24Q96S15 920 aa9.28□□□□□ -0.92
HMGXB4-202ENST00000418170 ME1P48163 572 aa9.27□□□□□ -0.92
HMGXB4-202ENST00000418170 AXDND1Q5T1B0 1012 aaPredicted RBP9.27□□□□□ -0.92
HMGXB4-202ENST00000418170 WAPLQ7Z5K2 1190 aa9.27□□□□□ -0.92
HMGXB4-202ENST00000418170 MRPS27Q92552 414 aaKnown RBP9.27□□□□□ -0.92
HMGXB4-202ENST00000418170 PPP2R2CQ9Y2T4 447 aa9.27□□□□□ -0.92
HMGXB4-202ENST00000418170 JCADQ9P266 1359 aa9.27□□□□□ -0.92
HMGXB4-202ENST00000418170 ARHGAP6O43182 974 aa9.27□□□□□ -0.93
HMGXB4-202ENST00000418170 FOXO3O43524 673 aa9.27□□□□□ -0.93
HMGXB4-202ENST00000418170 HDXQ7Z353 690 aa9.27□□□□□ -0.93
HMGXB4-202ENST00000418170 SMARCC2Q8TAQ2 1214 aa9.27□□□□□ -0.93
HMGXB4-202ENST00000418170 ZNF396Q96N95 335 aaPredicted RBP9.27□□□□□ -0.93
HMGXB4-202ENST00000418170 SETD1BQ9UPS6 1966 aaKnown RBP9.27□□□□□ -0.93
HMGXB4-202ENST00000418170 NEDD4P46934 1319 aa9.27□□□□□ -0.93
HMGXB4-202ENST00000418170 CLGNO14967 610 aa9.27□□□□□ -0.93
HMGXB4-202ENST00000418170 USP5P45974 858 aa9.27□□□□□ -0.93
HMGXB4-202ENST00000418170 GNG11P61952 73 aa9.27□□□□□ -0.93
HMGXB4-202ENST00000418170 BEND6Q5SZJ8 279 aaPredicted RBP9.27□□□□□ -0.93
HMGXB4-202ENST00000418170 NBPF6Q5VWK0 638 aa9.27□□□□□ -0.93
HMGXB4-202ENST00000418170 TMEM139Q8IV31 216 aa9.27□□□□□ -0.93
HMGXB4-202ENST00000418170 KIFC2Q96AC6 838 aa9.27□□□□□ -0.93
HMGXB4-202ENST00000418170 NBPF4Q96M43 638 aa9.27□□□□□ -0.93
HMGXB4-202ENST00000418170 RGPD2P0DJD1 1756 aa9.27□□□□□ -0.93
HMGXB4-202ENST00000418170 MED23Q9ULK4 1368 aa9.27□□□□□ -0.93
HMGXB4-202ENST00000418170 IKBKBO14920 756 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 EIF3JO75822 258 aaKnown RBP9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 FAM177A1Q8N128 213 aaPredicted RBP9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 NECTIN2Q92692 538 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 LTN1O94822 1766 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 SART3Q15020 963 aaKnown RBP9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 MTHFSDQ2M296 383 aaKnown RBP9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 ERC1Q8IUD2 1116 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 EFCAB13Q8IY85 973 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 FMNL2Q96PY5 1086 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 LLPHQ9BRT6 129 aaKnown RBP9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 AKAP2Q9Y2D5 859 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 NCKAP5LQ9HCH0 1330 aa9.26□□□□□ -0.93
HMGXB4-202ENST00000418170 A0A1W2PQ27 194 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms