RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 ZFRQ96KR1 1074 aaKnown RBP7.42□□□□□ -1.22
CCNT1-202ENST00000417344 FAM117AQ9C073 453 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 FAM107BQ9H098 131 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 OSBPL5Q9H0X9 879 aaPredicted RBP7.42□□□□□ -1.22
CCNT1-202ENST00000417344 GOPCQ9HD26 462 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 LIMCH1Q9UPQ0 1083 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 ARHGEF5Q12774 1597 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 YTHDC2Q9H6S0 1430 aaKnown RBP7.42□□□□□ -1.22
CCNT1-202ENST00000417344 ATP10DQ9P241 1426 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 KNDC1Q76NI1 1749 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 GOLGA6L4A6NEF3 574 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 SRGAP3O43295 1099 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 CCP110O43303 1012 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 C21orf2O43822 256 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 URI1O94763 535 aaPredicted RBP7.42□□□□□ -1.22
CCNT1-202ENST00000417344 CD46P15529 392 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 GJB2P29033 226 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 HSPA4P34932 840 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 APOBRQ0VD83 1088 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 LONRF2Q1L5Z9 754 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 CCDC30Q5VVM6 783 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 JAKMIP3Q5VZ66 844 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 TTLL5Q6EMB2 1281 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 CEP85Q6P2H3 762 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 ERC1Q8IUD2 1116 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 JMYQ8N9B5 988 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 CCDC150Q8NCX0 1101 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 TBC1D22AQ8WUA7 517 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 PRAM1Q96QH2 718 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 PARD6BQ9BYG5 372 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 IMPACTQ9P2X3 320 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 TCHHQ07283 1943 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 MSH6P52701 1360 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 VPS37CA5D8V6 355 aaPredicted RBP7.41□□□□□ -1.22
CCNT1-202ENST00000417344 BECN2A8MW95 431 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 EPB41L2O43491 1005 aaKnown RBP7.41□□□□□ -1.22
CCNT1-202ENST00000417344 NRDCO43847 1150 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 PPFIA4O75335 1185 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 ERLIN2O94905 339 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 SCP2P22307 547 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 CHMLP26374 656 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 HNRNPH1P31943 449 aaKnown RBP7.41□□□□□ -1.22
CCNT1-202ENST00000417344 AK2P54819 239 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 GNL2Q13823 731 aaKnown RBP7.41□□□□□ -1.22
CCNT1-202ENST00000417344 C11orf91Q3C1V1 193 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 FAM43BQ6ZT52 329 aaPredicted RBP7.41□□□□□ -1.22
CCNT1-202ENST00000417344 NBPF11Q86T75 865 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 CDAN1Q8IWY9 1227 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 KAT2BQ92831 832 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 TTC14Q96N46 770 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 PDE11AQ9HCR9 933 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 PCDH10Q9P2E7 1040 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 PARP3Q9Y6F1 533 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 KIAA0556O60303 1618 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 IQGAP3Q86VI3 1631 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 NPHP3Q7Z494 1330 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 TTC21AQ8NDW8 1320 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 FANCAO15360 1455 aa7.41□□□□□ -1.22
CCNT1-202ENST00000417344 CCDC151A5D8V7 595 aa7.4□□□□□ -1.22
CCNT1-202ENST00000417344 SGSM2O43147 1006 aa7.4□□□□□ -1.22
CCNT1-202ENST00000417344 EIF3JO75822 258 aaKnown RBP7.4□□□□□ -1.22
CCNT1-202ENST00000417344 BRD3Q15059 726 aa7.4□□□□□ -1.22
CCNT1-202ENST00000417344 PLEKHO1Q53GL0 409 aaPredicted RBP7.4□□□□□ -1.22
CCNT1-202ENST00000417344 C11orf57Q6ZUT1 292 aaPredicted RBP7.4□□□□□ -1.22
CCNT1-202ENST00000417344 RUFY3Q7L099 469 aa7.4□□□□□ -1.22
CCNT1-202ENST00000417344 ANKK1Q8NFD2 765 aa7.4□□□□□ -1.22
CCNT1-202ENST00000417344 GIMAP7Q8NHV1 300 aa7.4□□□□□ -1.22
CCNT1-202ENST00000417344 STAG1Q8WVM7 1258 aa7.4□□□□□ -1.22
CCNT1-202ENST00000417344 RABGGTAQ92696 567 aa7.4□□□□□ -1.22
CCNT1-202ENST00000417344 BEGAINQ9BUH8 593 aa7.4□□□□□ -1.22
CCNT1-202ENST00000417344 AKAP2Q9Y2D5 859 aa7.4□□□□□ -1.22
CCNT1-202ENST00000417344 ARHGEF40Q8TER5 1519 aa7.4□□□□□ -1.22
CCNT1-202ENST00000417344 PLEKHG3A1L390 1219 aa7.4□□□□□ -1.23
CCNT1-202ENST00000417344 GOLGA8CPA6NN73 597 aa7.4□□□□□ -1.23
CCNT1-202ENST00000417344 NR1I2O75469 434 aa7.4□□□□□ -1.23
CCNT1-202ENST00000417344 SFPQP23246 707 aaKnown RBP eCLIP7.4□□□□□ -1.23
CCNT1-202ENST00000417344 SETQ01105 290 aaPredicted RBP7.4□□□□□ -1.23
CCNT1-202ENST00000417344 SEMA3FQ13275 785 aa7.4□□□□□ -1.23
CCNT1-202ENST00000417344 BIRC2Q13490 618 aa7.4□□□□□ -1.23
CCNT1-202ENST00000417344 DHX8Q14562 1220 aaKnown RBP7.4□□□□□ -1.23
CCNT1-202ENST00000417344 STX1AQ16623 288 aa7.4□□□□□ -1.23
CCNT1-202ENST00000417344 KCNV1Q6PIU1 500 aa7.4□□□□□ -1.23
CCNT1-202ENST00000417344 TRIM65Q6PJ69 517 aa7.4□□□□□ -1.23
CCNT1-202ENST00000417344 GBP6Q6ZN66 633 aa7.4□□□□□ -1.23
CCNT1-202ENST00000417344 RSRC2Q7L4I2 434 aaKnown RBP7.4□□□□□ -1.23
CCNT1-202ENST00000417344 MSL3Q8N5Y2 521 aaKnown RBP7.4□□□□□ -1.23
CCNT1-202ENST00000417344 TSPYL6Q8N831 410 aa7.4□□□□□ -1.23
CCNT1-202ENST00000417344 MIEF2Q96C03 454 aa7.4□□□□□ -1.23
CCNT1-202ENST00000417344 LRCH3Q96II8 777 aa7.4□□□□□ -1.23
CCNT1-202ENST00000417344 SCAND2PQ9GZW5 306 aaPredicted RBP7.4□□□□□ -1.23
CCNT1-202ENST00000417344 SLC12A5Q9H2X9 1139 aa7.4□□□□□ -1.23
CCNT1-202ENST00000417344 A1CFQ9NQ94 594 aaKnown RBP7.4□□□□□ -1.23
CCNT1-202ENST00000417344 FAN1Q9Y2M0 1017 aa7.4□□□□□ -1.23
CCNT1-202ENST00000417344 SH3BP1Q9Y3L3 701 aa7.4□□□□□ -1.23
CCNT1-202ENST00000417344 SBNO2Q9Y2G9 1366 aa7.4□□□□□ -1.23
CCNT1-202ENST00000417344 FANCGO15287 622 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 PPP2R3AQ06190 1150 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 MCM6Q14566 821 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 NBPF6Q5VWK0 638 aa7.39□□□□□ -1.23
CCNT1-202ENST00000417344 ARMCX5Q6P1M9 558 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms