RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 TDRD7Q8NHU6 1098 aaKnown RBP17.31■□□□□ 0.36
LINC00475-202ENST00000416438 DSCC1Q9BVC3 393 aa17.31■□□□□ 0.36
LINC00475-202ENST00000416438 HMGB1P09429 215 aaKnown RBP17.3■□□□□ 0.36
LINC00475-202ENST00000416438 IL15P40933 162 aaPredicted RBP17.3■□□□□ 0.36
LINC00475-202ENST00000416438 LLPHQ9BRT6 129 aaKnown RBP17.3■□□□□ 0.36
LINC00475-202ENST00000416438 KIF3AQ9Y496 699 aa17.3■□□□□ 0.36
LINC00475-202ENST00000416438 PALLDQ8WX93 1383 aa17.3■□□□□ 0.36
LINC00475-202ENST00000416438 AFDNP55196 1824 aaKnown RBP17.3■□□□□ 0.36
LINC00475-202ENST00000416438 EYA2O00167 538 aa17.3■□□□□ 0.36
LINC00475-202ENST00000416438 RIOK3O14730 519 aaKnown RBP17.3■□□□□ 0.36
LINC00475-202ENST00000416438 PDIA3P30101 505 aaKnown RBP17.3■□□□□ 0.36
LINC00475-202ENST00000416438 HAND2P61296 217 aa17.3■□□□□ 0.36
LINC00475-202ENST00000416438 OTUD7BQ6GQQ9 843 aa17.3■□□□□ 0.36
LINC00475-202ENST00000416438 CADPS2Q86UW7 1296 aa17.3■□□□□ 0.36
LINC00475-202ENST00000416438 FBXW7Q969H0 707 aa17.3■□□□□ 0.36
LINC00475-202ENST00000416438 OSBP2Q969R2 916 aa17.3■□□□□ 0.36
LINC00475-202ENST00000416438 ZNF330Q9Y3S2 320 aaPredicted RBP17.3■□□□□ 0.36
LINC00475-202ENST00000416438 SPATA31A3Q5VYP0 1347 aa17.3■□□□□ 0.36
LINC00475-202ENST00000416438 GTF2F1P35269 517 aaKnown RBP eCLIP17.29■□□□□ 0.36
LINC00475-202ENST00000416438 CCDC144BQ3MJ40 725 aa17.29■□□□□ 0.36
LINC00475-202ENST00000416438 HSP90AB3PQ58FF7 597 aa17.29■□□□□ 0.36
LINC00475-202ENST00000416438 CCDC144CPQ8IYA2 1237 aa17.29■□□□□ 0.36
LINC00475-202ENST00000416438 RCOR1Q9UKL0 485 aa17.29■□□□□ 0.36
LINC00475-202ENST00000416438 RNF113AO15541 343 aaKnown RBP17.29■□□□□ 0.36
LINC00475-202ENST00000416438 NAA16Q6N069 864 aaPredicted RBP17.29■□□□□ 0.36
LINC00475-202ENST00000416438 ILDR1Q86SU0 546 aaPredicted RBP17.29■□□□□ 0.36
LINC00475-202ENST00000416438 ADORA1P30542 326 aa17.28■□□□□ 0.36
LINC00475-202ENST00000416438 HSPA2P54652 639 aa17.28■□□□□ 0.36
LINC00475-202ENST00000416438 ZSCAN25Q6NSZ9 544 aa17.28■□□□□ 0.36
LINC00475-202ENST00000416438 RAB11FIP4Q86YS3 637 aa17.28■□□□□ 0.36
LINC00475-202ENST00000416438 BCL2L12Q9HB09 334 aa17.28■□□□□ 0.36
LINC00475-202ENST00000416438 CLIP2Q9UDT6 1046 aa17.28■□□□□ 0.36
LINC00475-202ENST00000416438 ARFGEF2Q9Y6D5 1785 aa17.28■□□□□ 0.36
LINC00475-202ENST00000416438 SNW1Q13573 536 aaKnown RBP17.28■□□□□ 0.36
LINC00475-202ENST00000416438 AGXT2Q9BYV1 514 aa17.28■□□□□ 0.36
LINC00475-202ENST00000416438 IQCB1Q15051 598 aa17.27■□□□□ 0.36
LINC00475-202ENST00000416438 MTERF4Q7Z6M4 381 aaKnown RBP17.27■□□□□ 0.36
LINC00475-202ENST00000416438 CACTINQ8WUQ7 758 aaKnown RBP17.27■□□□□ 0.36
LINC00475-202ENST00000416438 FDPSP14324 419 aaKnown RBP17.27■□□□□ 0.36
LINC00475-202ENST00000416438 ARID5BQ14865 1188 aa17.27■□□□□ 0.36
LINC00475-202ENST00000416438 C16orf45Q96MC5 204 aaPredicted RBP17.27■□□□□ 0.36
LINC00475-202ENST00000416438 GPR108Q9NPR9 543 aa17.27■□□□□ 0.36
LINC00475-202ENST00000416438 DCCP43146 1447 aa17.27■□□□□ 0.35
LINC00475-202ENST00000416438 ME1P48163 572 aa17.26■□□□□ 0.35
LINC00475-202ENST00000416438 WASHC4Q2M389 1173 aa17.26■□□□□ 0.35
LINC00475-202ENST00000416438 SCARF1Q14162 830 aa17.26■□□□□ 0.35
LINC00475-202ENST00000416438 GJB4Q9NTQ9 266 aa17.26■□□□□ 0.35
LINC00475-202ENST00000416438 CEP126Q9P2H0 1117 aa17.26■□□□□ 0.35
LINC00475-202ENST00000416438 SALL1Q9NSC2 1324 aa17.26■□□□□ 0.35
LINC00475-202ENST00000416438 GOLGA6L19H0YKK7 550 aa17.25■□□□□ 0.35
LINC00475-202ENST00000416438 FOXP2O15409 715 aa17.25■□□□□ 0.35
LINC00475-202ENST00000416438 CHAF1AQ13111 956 aaPredicted RBP17.25■□□□□ 0.35
LINC00475-202ENST00000416438 PI16Q6UXB8 463 aa17.25■□□□□ 0.35
LINC00475-202ENST00000416438 TOM1L2Q6ZVM7 507 aa17.25■□□□□ 0.35
LINC00475-202ENST00000416438 FSIP1Q8NA03 581 aa17.25■□□□□ 0.35
LINC00475-202ENST00000416438 CCDC191Q8NCU4 936 aa17.25■□□□□ 0.35
LINC00475-202ENST00000416438 ZCRB1Q8TBF4 217 aaKnown RBP17.25■□□□□ 0.35
LINC00475-202ENST00000416438 GORABQ5T7V8 394 aa17.25■□□□□ 0.35
LINC00475-202ENST00000416438 CCDC73Q6ZRK6 1079 aa17.25■□□□□ 0.35
LINC00475-202ENST00000416438 ENGASEQ8NFI3 743 aa17.25■□□□□ 0.35
LINC00475-202ENST00000416438 PRDM11Q9NQV5 511 aa17.25■□□□□ 0.35
LINC00475-202ENST00000416438 PKD1L3Q7Z443 1732 aa17.25■□□□□ 0.35
LINC00475-202ENST00000416438 POLR3DP05423 398 aaPredicted RBP17.24■□□□□ 0.35
LINC00475-202ENST00000416438 ZNF274Q96GC6 653 aaPredicted RBP17.24■□□□□ 0.35
LINC00475-202ENST00000416438 TAOK2Q9UL54 1235 aa17.24■□□□□ 0.35
LINC00475-202ENST00000416438 CARMIL3Q8ND23 1372 aa17.24■□□□□ 0.35
LINC00475-202ENST00000416438 A0A1B0GVL5 298 aa17.24■□□□□ 0.35
LINC00475-202ENST00000416438 XAGE2Q96GT9 111 aa17.24■□□□□ 0.35
LINC00475-202ENST00000416438 ZNF396Q96N95 335 aaPredicted RBP17.24■□□□□ 0.35
LINC00475-202ENST00000416438 PCDHA7Q9UN72 937 aa17.24■□□□□ 0.35
LINC00475-202ENST00000416438 CPDO75976 1380 aa17.24■□□□□ 0.35
LINC00475-202ENST00000416438 KINO60870 393 aaKnown RBP17.23■□□□□ 0.35
LINC00475-202ENST00000416438 STX1AQ16623 288 aa17.23■□□□□ 0.35
LINC00475-202ENST00000416438 CCDC57Q2TAC2 916 aa17.23■□□□□ 0.35
LINC00475-202ENST00000416438 TTC39AQ5SRH9 613 aa17.23■□□□□ 0.35
LINC00475-202ENST00000416438 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.23■□□□□ 0.35
LINC00475-202ENST00000416438 FAM89AQ96GI7 184 aa17.23■□□□□ 0.35
LINC00475-202ENST00000416438 BCL11BQ9C0K0 894 aaPredicted RBP17.23■□□□□ 0.35
LINC00475-202ENST00000416438 ABCC6O95255 1503 aa17.23■□□□□ 0.35
LINC00475-202ENST00000416438 GLI3P10071 1580 aa17.23■□□□□ 0.35
LINC00475-202ENST00000416438 FGAP02671 866 aa17.23■□□□□ 0.35
LINC00475-202ENST00000416438 BRINP3Q76B58 766 aa17.23■□□□□ 0.35
LINC00475-202ENST00000416438 SYNE4Q8N205 404 aa17.23■□□□□ 0.35
LINC00475-202ENST00000416438 PUS7LQ9H0K6 701 aaKnown RBP17.23■□□□□ 0.35
LINC00475-202ENST00000416438 BECN2A8MW95 431 aa17.22■□□□□ 0.35
LINC00475-202ENST00000416438 ZAP70P43403 619 aa17.22■□□□□ 0.35
LINC00475-202ENST00000416438 FAM160A1Q05DH4 1040 aa17.22■□□□□ 0.35
LINC00475-202ENST00000416438 CCDC158Q5M9N0 1113 aa17.22■□□□□ 0.35
LINC00475-202ENST00000416438 CCDC94Q9BW85 323 aaPredicted RBP17.22■□□□□ 0.35
LINC00475-202ENST00000416438 CLIC4Q9Y696 253 aa17.22■□□□□ 0.35
LINC00475-202ENST00000416438 LAMA4Q16363 1823 aa17.22■□□□□ 0.35
LINC00475-202ENST00000416438 DHX40Q8IX18 779 aaKnown RBP17.22■□□□□ 0.35
LINC00475-202ENST00000416438 PRDM10Q9NQV6 1147 aa17.22■□□□□ 0.35
LINC00475-202ENST00000416438 DENND2AQ9ULE3 1009 aa17.22■□□□□ 0.35
LINC00475-202ENST00000416438 CTAGE5O15320 804 aa17.21■□□□□ 0.35
LINC00475-202ENST00000416438 CIAO1O76071 339 aa17.21■□□□□ 0.35
LINC00475-202ENST00000416438 TNNT1P13805 278 aa17.21■□□□□ 0.35
LINC00475-202ENST00000416438 FILIP1Q7Z7B0 1213 aa17.21■□□□□ 0.35
LINC00475-202ENST00000416438 KLF18A0A0U1RQI7 1052 aa17.21■□□□□ 0.35
LINC00475-202ENST00000416438 PRC1O43663 620 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms