RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 UNCXA6NJT0 531 aa17.55■□□□□ 0.4
RAPGEF1-204ENST00000414781 RPS8P62241 208 aaKnown RBP17.55■□□□□ 0.4
RAPGEF1-204ENST00000414781 CRHR2Q13324 411 aa17.55■□□□□ 0.4
RAPGEF1-204ENST00000414781 PDIA6Q15084 440 aa17.55■□□□□ 0.4
RAPGEF1-204ENST00000414781 PODNQ7Z5L7 613 aa17.55■□□□□ 0.4
RAPGEF1-204ENST00000414781 THUMPD2Q9BTF0 503 aaKnown RBP17.55■□□□□ 0.4
RAPGEF1-204ENST00000414781 PNNQ9H307 717 aaKnown RBP17.55■□□□□ 0.4
RAPGEF1-204ENST00000414781 ANKIB1Q9P2G1 1089 aa17.55■□□□□ 0.4
RAPGEF1-204ENST00000414781 ANGEL1Q9UNK9 670 aaKnown RBP17.55■□□□□ 0.4
RAPGEF1-204ENST00000414781 WNK4Q96J92 1243 aa17.54■□□□□ 0.4
RAPGEF1-204ENST00000414781 COL1A1P02452 1464 aaPredicted RBP17.53■□□□□ 0.4
RAPGEF1-204ENST00000414781 WNT10BO00744 389 aa17.53■□□□□ 0.4
RAPGEF1-204ENST00000414781 PRKG1Q13976 671 aa17.53■□□□□ 0.4
RAPGEF1-204ENST00000414781 MAP3K11Q16584 847 aa17.53■□□□□ 0.4
RAPGEF1-204ENST00000414781 DPF3Q92784 378 aa17.53■□□□□ 0.4
RAPGEF1-204ENST00000414781 PRO3102Q9H379 93 aa17.53■□□□□ 0.4
RAPGEF1-204ENST00000414781 MYO3BQ8WXR4 1341 aa17.52■□□□□ 0.4
RAPGEF1-204ENST00000414781 FAM9BQ8IZU0 186 aa17.52■□□□□ 0.4
RAPGEF1-204ENST00000414781 PTCH2Q9Y6C5 1203 aa17.52■□□□□ 0.4
RAPGEF1-204ENST00000414781 NEFMP07197 916 aa17.51■□□□□ 0.39
RAPGEF1-204ENST00000414781 TAF1P21675 1872 aa17.51■□□□□ 0.39
RAPGEF1-204ENST00000414781 COPS6Q7L5N1 327 aa17.51■□□□□ 0.39
RAPGEF1-204ENST00000414781 HTATIP2Q9BUP3 242 aa17.51■□□□□ 0.39
RAPGEF1-204ENST00000414781 NR2E3Q9Y5X4 410 aa17.51■□□□□ 0.39
RAPGEF1-204ENST00000414781 PPP1R12BO60237 982 aaPredicted RBP17.5■□□□□ 0.39
RAPGEF1-204ENST00000414781 EIF2S2P20042 333 aaKnown RBP17.5■□□□□ 0.39
RAPGEF1-204ENST00000414781 PROSER3Q2NL68 480 aa17.5■□□□□ 0.39
RAPGEF1-204ENST00000414781 XAGE3Q8WTP9 111 aa17.5■□□□□ 0.39
RAPGEF1-204ENST00000414781 COL6A3P12111 3177 aa17.5■□□□□ 0.39
RAPGEF1-204ENST00000414781 HSP90B1P14625 803 aaKnown RBP17.49■□□□□ 0.39
RAPGEF1-204ENST00000414781 ADAMTS8Q9UP79 889 aa17.49■□□□□ 0.39
RAPGEF1-204ENST00000414781 PSME4Q14997 1843 aa17.49■□□□□ 0.39
RAPGEF1-204ENST00000414781 TESPA1A2RU30 521 aaPredicted RBP17.48■□□□□ 0.39
RAPGEF1-204ENST00000414781 ANXA1P04083 346 aa17.48■□□□□ 0.39
RAPGEF1-204ENST00000414781 AIMP1Q12904 312 aaKnown RBP17.48■□□□□ 0.39
RAPGEF1-204ENST00000414781 NKX2-3Q8TAU0 364 aa17.48■□□□□ 0.39
RAPGEF1-204ENST00000414781 FAM89AQ96GI7 184 aa17.48■□□□□ 0.39
RAPGEF1-204ENST00000414781 XDHP47989 1333 aa17.47■□□□□ 0.39
RAPGEF1-204ENST00000414781 SASH1O94885 1247 aa17.47■□□□□ 0.39
RAPGEF1-204ENST00000414781 DACT2Q5SW24 774 aa17.47■□□□□ 0.39
RAPGEF1-204ENST00000414781 ANKRD13DQ6ZTN6 518 aa17.47■□□□□ 0.39
RAPGEF1-204ENST00000414781 PPP2R3BQ9Y5P8 575 aa17.47■□□□□ 0.39
RAPGEF1-204ENST00000414781 LAMB1P07942 1786 aa17.46■□□□□ 0.39
RAPGEF1-204ENST00000414781 ATP2B4P23634 1241 aa17.46■□□□□ 0.39
RAPGEF1-204ENST00000414781 CAP1Q01518 475 aa17.46■□□□□ 0.39
RAPGEF1-204ENST00000414781 GPR153Q6NV75 609 aa17.46■□□□□ 0.39
RAPGEF1-204ENST00000414781 CLMNQ96JQ2 1002 aa17.46■□□□□ 0.39
RAPGEF1-204ENST00000414781 TSPYL4Q9UJ04 414 aa17.46■□□□□ 0.39
RAPGEF1-204ENST00000414781 IRS4O14654 1257 aaPredicted RBP17.45■□□□□ 0.38
RAPGEF1-204ENST00000414781 MYCP01106 439 aaPredicted RBP17.45■□□□□ 0.38
RAPGEF1-204ENST00000414781 GNRH1P01148 92 aa17.45■□□□□ 0.38
RAPGEF1-204ENST00000414781 PRMT2P55345 433 aa17.45■□□□□ 0.38
RAPGEF1-204ENST00000414781 STRIP1Q5VSL9 837 aa17.45■□□□□ 0.38
RAPGEF1-204ENST00000414781 ISCA1Q9BUE6 129 aa17.45■□□□□ 0.38
RAPGEF1-204ENST00000414781 DEFB129Q9H1M3 183 aa17.45■□□□□ 0.38
RAPGEF1-204ENST00000414781 ZFYVE28Q9HCC9 887 aa17.45■□□□□ 0.38
RAPGEF1-204ENST00000414781 COL4A1P02462 1669 aa17.45■□□□□ 0.38
RAPGEF1-204ENST00000414781 MED23Q9ULK4 1368 aa17.44■□□□□ 0.38
RAPGEF1-204ENST00000414781 WTIPA6NIX2 430 aaPredicted RBP17.44■□□□□ 0.38
RAPGEF1-204ENST00000414781 IREB2P48200 963 aaKnown RBP17.44■□□□□ 0.38
RAPGEF1-204ENST00000414781 SUPT20HL1Q3ZLR7 823 aa17.44■□□□□ 0.38
RAPGEF1-204ENST00000414781 PLBD2Q8NHP8 589 aa17.44■□□□□ 0.38
RAPGEF1-204ENST00000414781 PTPN18Q99952 460 aa17.44■□□□□ 0.38
RAPGEF1-204ENST00000414781 ZBTB7BO15156 539 aaPredicted RBP17.43■□□□□ 0.38
RAPGEF1-204ENST00000414781 WDHD1O75717 1129 aaPredicted RBP17.43■□□□□ 0.38
RAPGEF1-204ENST00000414781 KIF22Q14807 665 aa17.43■□□□□ 0.38
RAPGEF1-204ENST00000414781 SH3TC2Q8TF17 1288 aa17.43■□□□□ 0.38
RAPGEF1-204ENST00000414781 SHISA4Q96DD7 197 aa17.43■□□□□ 0.38
RAPGEF1-204ENST00000414781 ZBED3Q96IU2 234 aaPredicted RBP17.43■□□□□ 0.38
RAPGEF1-204ENST00000414781 BABAM1Q9NWV8 329 aa17.43■□□□□ 0.38
RAPGEF1-204ENST00000414781 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.43■□□□□ 0.38
RAPGEF1-204ENST00000414781 SOX1O00570 391 aaPredicted RBP17.42■□□□□ 0.38
RAPGEF1-204ENST00000414781 TAF1CQ15572 869 aaPredicted RBP17.42■□□□□ 0.38
RAPGEF1-204ENST00000414781 NFE2L2Q16236 605 aa17.42■□□□□ 0.38
RAPGEF1-204ENST00000414781 CCDC152Q4G0S7 254 aa17.42■□□□□ 0.38
RAPGEF1-204ENST00000414781 UBE2Q1Q7Z7E8 422 aa17.42■□□□□ 0.38
RAPGEF1-204ENST00000414781 ANKRD13AQ8IZ07 590 aa17.42■□□□□ 0.38
RAPGEF1-204ENST00000414781 RUNDC1Q96C34 613 aa17.42■□□□□ 0.38
RAPGEF1-204ENST00000414781 FZD1Q9UP38 647 aa17.42■□□□□ 0.38
RAPGEF1-204ENST00000414781 STXBP5LQ9Y2K9 1186 aa17.42■□□□□ 0.38
RAPGEF1-204ENST00000414781 SSC5DA1L4H1 1573 aa17.41■□□□□ 0.38
RAPGEF1-204ENST00000414781 GJA5P36382 358 aa17.41■□□□□ 0.38
RAPGEF1-204ENST00000414781 TRIM28Q13263 835 aaKnown RBP17.41■□□□□ 0.38
RAPGEF1-204ENST00000414781 FBXW7Q969H0 707 aa17.41■□□□□ 0.38
RAPGEF1-204ENST00000414781 LRCH3Q96II8 777 aa17.41■□□□□ 0.38
RAPGEF1-204ENST00000414781 SEC31BQ9NQW1 1179 aa17.41■□□□□ 0.38
RAPGEF1-204ENST00000414781 MAPK8IP3Q9UPT6 1336 aa17.41■□□□□ 0.38
RAPGEF1-204ENST00000414781 ZNF428Q96B54 188 aa17.4■□□□□ 0.38
RAPGEF1-204ENST00000414781 MXD3Q9BW11 206 aa17.4■□□□□ 0.38
RAPGEF1-204ENST00000414781 COL25A1Q9BXS0 654 aaPredicted RBP17.4■□□□□ 0.38
RAPGEF1-204ENST00000414781 COA1Q9GZY4 146 aa17.4■□□□□ 0.38
RAPGEF1-204ENST00000414781 ATP5J2-PTCD1G3V325 749 aa17.39■□□□□ 0.37
RAPGEF1-204ENST00000414781 GJA8P48165 433 aa17.39■□□□□ 0.37
RAPGEF1-204ENST00000414781 RTL5Q5HYW3 569 aaPredicted RBP17.39■□□□□ 0.37
RAPGEF1-204ENST00000414781 ANKRD18AQ8IVF6 992 aa17.39■□□□□ 0.37
RAPGEF1-204ENST00000414781 ZNF804BA4D1E1 1349 aa17.39■□□□□ 0.37
RAPGEF1-204ENST00000414781 GJB1P08034 283 aa17.38■□□□□ 0.37
RAPGEF1-204ENST00000414781 DLGAP5Q15398 846 aa17.38■□□□□ 0.37
RAPGEF1-204ENST00000414781 ZBTB38Q8NAP3 1195 aaPredicted RBP17.38■□□□□ 0.37
RAPGEF1-204ENST00000414781 MS4A4AQ96JQ5 239 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms