RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 USP28Q96RU2 1077 aa16.24■□□□□ 0.19
NUB1-201ENST00000413040 NRBP1Q9UHY1 535 aa16.24■□□□□ 0.19
NUB1-201ENST00000413040 PHRF1Q9P1Y6 1649 aaKnown RBP16.23■□□□□ 0.19
NUB1-201ENST00000413040 PFKFB2O60825 505 aa16.23■□□□□ 0.19
NUB1-201ENST00000413040 POLR3DP05423 398 aaPredicted RBP16.23■□□□□ 0.19
NUB1-201ENST00000413040 SF3A1Q15459 793 aaKnown RBP16.23■□□□□ 0.19
NUB1-201ENST00000413040 MST1RQ04912 1400 aa16.23■□□□□ 0.19
NUB1-201ENST00000413040 SH3TC1Q8TE82 1336 aa16.23■□□□□ 0.19
NUB1-201ENST00000413040 LRMPQ12912 555 aa16.23■□□□□ 0.19
NUB1-201ENST00000413040 SYTL4Q96C24 671 aaPredicted RBP16.23■□□□□ 0.19
NUB1-201ENST00000413040 XAGE2Q96GT9 111 aa16.23■□□□□ 0.19
NUB1-201ENST00000413040 DSCC1Q9BVC3 393 aa16.23■□□□□ 0.19
NUB1-201ENST00000413040 BECN2A8MW95 431 aa16.22■□□□□ 0.19
NUB1-201ENST00000413040 CTDNEP1O95476 244 aa16.22■□□□□ 0.19
NUB1-201ENST00000413040 APPP05067 770 aa16.22■□□□□ 0.19
NUB1-201ENST00000413040 KCNF1Q9H3M0 494 aa16.22■□□□□ 0.19
NUB1-201ENST00000413040 IL2RBP14784 551 aa16.22■□□□□ 0.19
NUB1-201ENST00000413040 HMGN5P82970 282 aaKnown RBP16.22■□□□□ 0.19
NUB1-201ENST00000413040 DNAJC10Q8IXB1 793 aa16.22■□□□□ 0.19
NUB1-201ENST00000413040 CPLX1O14810 134 aa16.22■□□□□ 0.19
NUB1-201ENST00000413040 KINO60870 393 aaKnown RBP16.22■□□□□ 0.19
NUB1-201ENST00000413040 ZAP70P43403 619 aa16.22■□□□□ 0.19
NUB1-201ENST00000413040 SCARF1Q14162 830 aa16.22■□□□□ 0.19
NUB1-201ENST00000413040 TMOD3Q9NYL9 352 aa16.22■□□□□ 0.19
NUB1-201ENST00000413040 DYNC1I1O14576 645 aa16.21■□□□□ 0.19
NUB1-201ENST00000413040 PDIA3P30101 505 aaKnown RBP16.21■□□□□ 0.19
NUB1-201ENST00000413040 IFIT5Q13325 482 aaKnown RBP16.21■□□□□ 0.19
NUB1-201ENST00000413040 RALYLQ86SE5 291 aaKnown RBP16.21■□□□□ 0.19
NUB1-201ENST00000413040 CHAF1AQ13111 956 aaPredicted RBP16.21■□□□□ 0.19
NUB1-201ENST00000413040 METTL24Q5JXM2 366 aa16.21■□□□□ 0.19
NUB1-201ENST00000413040 FSIP1Q8NA03 581 aa16.21■□□□□ 0.19
NUB1-201ENST00000413040 SDF4Q9BRK5 362 aa16.21■□□□□ 0.19
NUB1-201ENST00000413040 GJB4Q9NTQ9 266 aa16.21■□□□□ 0.19
NUB1-201ENST00000413040 IMMTQ16891 758 aaKnown RBP16.2■□□□□ 0.18
NUB1-201ENST00000413040 ASAP1Q9ULH1 1129 aa16.2■□□□□ 0.18
NUB1-201ENST00000413040 WDR17Q8IZU2 1322 aa16.2■□□□□ 0.18
NUB1-201ENST00000413040 SCN11AQ9UI33 1791 aa16.2■□□□□ 0.18
NUB1-201ENST00000413040 TNS3Q68CZ2 1445 aa16.2■□□□□ 0.18
NUB1-201ENST00000413040 LDHAL6AQ6ZMR3 332 aa16.2■□□□□ 0.18
NUB1-201ENST00000413040 KIF6Q6ZMV9 814 aa16.2■□□□□ 0.18
NUB1-201ENST00000413040 JCADQ9P266 1359 aa16.2■□□□□ 0.18
NUB1-201ENST00000413040 SIPA1L3O60292 1781 aaPredicted RBP16.2■□□□□ 0.18
NUB1-201ENST00000413040 KLF18A0A0U1RQI7 1052 aa16.2■□□□□ 0.18
NUB1-201ENST00000413040 SMARCC2Q8TAQ2 1214 aa16.2■□□□□ 0.18
NUB1-201ENST00000413040 KIAA1524Q8TCG1 905 aa16.2■□□□□ 0.18
NUB1-201ENST00000413040 ZNF396Q96N95 335 aaPredicted RBP16.2■□□□□ 0.18
NUB1-201ENST00000413040 CNNM1Q9NRU3 951 aa16.2■□□□□ 0.18
NUB1-201ENST00000413040 AFDNP55196 1824 aaKnown RBP16.19■□□□□ 0.18
NUB1-201ENST00000413040 ERVV-2B6SEH9 535 aa16.19■□□□□ 0.18
NUB1-201ENST00000413040 IDH1O75874 414 aaKnown RBP16.19■□□□□ 0.18
NUB1-201ENST00000413040 TCIRG1Q13488 830 aa16.19■□□□□ 0.18
NUB1-201ENST00000413040 LLPHQ9BRT6 129 aaKnown RBP16.19■□□□□ 0.18
NUB1-201ENST00000413040 TRPM3Q9HCF6 1732 aaPredicted RBP16.19■□□□□ 0.18
NUB1-201ENST00000413040 GOLGA8BA8MQT2 603 aa16.19■□□□□ 0.18
NUB1-201ENST00000413040 FGAP02671 866 aa16.19■□□□□ 0.18
NUB1-201ENST00000413040 EXOSC10Q01780 885 aaKnown RBP16.19■□□□□ 0.18
NUB1-201ENST00000413040 ZRSR1Q15695 479 aaKnown RBP16.19■□□□□ 0.18
NUB1-201ENST00000413040 CLIP2Q9UDT6 1046 aa16.19■□□□□ 0.18
NUB1-201ENST00000413040 PRC1O43663 620 aa16.18■□□□□ 0.18
NUB1-201ENST00000413040 RXRAP19793 462 aa16.18■□□□□ 0.18
NUB1-201ENST00000413040 BRINP3Q76B58 766 aa16.18■□□□□ 0.18
NUB1-201ENST00000413040 C16orf45Q96MC5 204 aaPredicted RBP16.18■□□□□ 0.18
NUB1-201ENST00000413040 PUS7LQ9H0K6 701 aaKnown RBP16.18■□□□□ 0.18
NUB1-201ENST00000413040 AKAP2Q9Y2D5 859 aa16.18■□□□□ 0.18
NUB1-201ENST00000413040 A0A1B0GVL5 298 aa16.18■□□□□ 0.18
NUB1-201ENST00000413040 STK38Q15208 465 aa16.18■□□□□ 0.18
NUB1-201ENST00000413040 LRRFIP1Q32MZ4 808 aaKnown RBP16.18■□□□□ 0.18
NUB1-201ENST00000413040 C11orf57Q6ZUT1 292 aaPredicted RBP16.18■□□□□ 0.18
NUB1-201ENST00000413040 FILIP1Q7Z7B0 1213 aa16.18■□□□□ 0.18
NUB1-201ENST00000413040 MYRIPQ8NFW9 859 aa16.18■□□□□ 0.18
NUB1-201ENST00000413040 C8orf76Q96K31 380 aa16.18■□□□□ 0.18
NUB1-201ENST00000413040 GOLPH3LQ9H4A5 285 aa16.18■□□□□ 0.18
NUB1-201ENST00000413040 GPR108Q9NPR9 543 aa16.18■□□□□ 0.18
NUB1-201ENST00000413040 ORC3Q9UBD5 711 aaPredicted RBP16.18■□□□□ 0.18
NUB1-201ENST00000413040 PALLDQ8WX93 1383 aa16.18■□□□□ 0.18
NUB1-201ENST00000413040 TPM3P06753 285 aa16.18■□□□□ 0.18
NUB1-201ENST00000413040 CTNNA3Q9UI47 895 aa16.18■□□□□ 0.18
NUB1-201ENST00000413040 ZNF213O14771 459 aa16.17■□□□□ 0.18
NUB1-201ENST00000413040 ZNF75DP51815 510 aa16.17■□□□□ 0.18
NUB1-201ENST00000413040 ATP2B3Q16720 1220 aa16.17■□□□□ 0.18
NUB1-201ENST00000413040 NAA16Q6N069 864 aaPredicted RBP16.17■□□□□ 0.18
NUB1-201ENST00000413040 HELBQ8NG08 1087 aaPredicted RBP16.17■□□□□ 0.18
NUB1-201ENST00000413040 CCDC144CPQ8IYA2 1237 aa16.17■□□□□ 0.18
NUB1-201ENST00000413040 STK11IPQ8N1F8 1099 aa16.17■□□□□ 0.18
NUB1-201ENST00000413040 RFX7Q2KHR2 1363 aa16.16■□□□□ 0.18
NUB1-201ENST00000413040 ZNF592Q92610 1267 aa16.16■□□□□ 0.18
NUB1-201ENST00000413040 GPAA1O43292 621 aa16.16■□□□□ 0.18
NUB1-201ENST00000413040 ADD1P35611 737 aaKnown RBP16.16■□□□□ 0.18
NUB1-201ENST00000413040 TRDNQ13061 729 aa16.16■□□□□ 0.18
NUB1-201ENST00000413040 RCOR1Q9UKL0 485 aa16.16■□□□□ 0.18
NUB1-201ENST00000413040 BIN1O00499 593 aa16.16■□□□□ 0.18
NUB1-201ENST00000413040 PRIMPOLQ96LW4 560 aa16.16■□□□□ 0.18
NUB1-201ENST00000413040 PODXL2Q9NZ53 605 aa16.16■□□□□ 0.18
NUB1-201ENST00000413040 DENND2AQ9ULE3 1009 aa16.16■□□□□ 0.18
NUB1-201ENST00000413040 HLFQ16534 295 aa16.15■□□□□ 0.18
NUB1-201ENST00000413040 SLC9C2Q5TAH2 1124 aa16.15■□□□□ 0.18
NUB1-201ENST00000413040 ISM2Q6H9L7 571 aa16.15■□□□□ 0.18
NUB1-201ENST00000413040 CARMIL3Q8ND23 1372 aa16.15■□□□□ 0.18
NUB1-201ENST00000413040 ITGA6P23229 1130 aa16.15■□□□□ 0.18
NUB1-201ENST00000413040 GNL2Q13823 731 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms