RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 KRT79Q5XKE5 535 aa20.88■□□□□ 0.93
HCG11-201ENST00000411553 MCM9Q9NXL9 1143 aa20.87■□□□□ 0.93
HCG11-201ENST00000411553 A0A1W2PRG0 241 aa20.87■□□□□ 0.93
HCG11-201ENST00000411553 NMIQ13287 307 aaPredicted RBP20.87■□□□□ 0.93
HCG11-201ENST00000411553 JDP2Q8WYK2 163 aa20.87■□□□□ 0.93
HCG11-201ENST00000411553 CNPY2Q9Y2B0 182 aa20.87■□□□□ 0.93
HCG11-201ENST00000411553 KDM5BQ9UGL1 1544 aa20.87■□□□□ 0.93
HCG11-201ENST00000411553 MRPL50Q8N5N7 158 aaKnown RBP20.87■□□□□ 0.93
HCG11-201ENST00000411553 RPRD2Q5VT52 1461 aaKnown RBP20.87■□□□□ 0.93
HCG11-201ENST00000411553 RNF113AO15541 343 aaKnown RBP20.87■□□□□ 0.93
HCG11-201ENST00000411553 POLD1P28340 1107 aa20.87■□□□□ 0.93
HCG11-201ENST00000411553 RASAL2Q9UJF2 1139 aa20.87■□□□□ 0.93
HCG11-201ENST00000411553 C6orf163Q5TEZ5 329 aa20.87■□□□□ 0.93
HCG11-201ENST00000411553 PAXBP1Q9Y5B6 917 aa20.87■□□□□ 0.93
HCG11-201ENST00000411553 CCDC171Q6TFL3 1326 aa20.86■□□□□ 0.93
HCG11-201ENST00000411553 ANO6Q4KMQ2 910 aa20.86■□□□□ 0.93
HCG11-201ENST00000411553 TFCP2L1Q9NZI6 479 aa20.86■□□□□ 0.93
HCG11-201ENST00000411553 NSFL1CQ9UNZ2 370 aaKnown RBP20.86■□□□□ 0.93
HCG11-201ENST00000411553 FAM13AO94988 1023 aa20.86■□□□□ 0.93
HCG11-201ENST00000411553 LINS1Q8NG48 757 aa20.86■□□□□ 0.93
HCG11-201ENST00000411553 DHX58Q96C10 678 aa20.86■□□□□ 0.93
HCG11-201ENST00000411553 ANKRD2Q9GZV1 360 aa20.86■□□□□ 0.93
HCG11-201ENST00000411553 IRS4O14654 1257 aaPredicted RBP20.86■□□□□ 0.93
HCG11-201ENST00000411553 LRSAM1Q6UWE0 723 aa20.86■□□□□ 0.93
HCG11-201ENST00000411553 SBNO2Q9Y2G9 1366 aa20.86■□□□□ 0.93
HCG11-201ENST00000411553 HSP90AA4PQ58FG1 418 aa20.85■□□□□ 0.93
HCG11-201ENST00000411553 EYA3Q99504 573 aa20.85■□□□□ 0.93
HCG11-201ENST00000411553 IQCGQ9H095 443 aaKnown RBP20.85■□□□□ 0.93
HCG11-201ENST00000411553 TNNI2P48788 182 aa20.85■□□□□ 0.93
HCG11-201ENST00000411553 RBM26Q5T8P6 1007 aaKnown RBP20.85■□□□□ 0.93
HCG11-201ENST00000411553 C8orf58Q8NAV2 365 aa20.85■□□□□ 0.93
HCG11-201ENST00000411553 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
HCG11-201ENST00000411553 KRT2P35908 639 aa20.85■□□□□ 0.93
HCG11-201ENST00000411553 EIF4A2Q14240 407 aaKnown RBP20.85■□□□□ 0.93
HCG11-201ENST00000411553 PA2G4Q9UQ80 394 aaKnown RBP20.85■□□□□ 0.93
HCG11-201ENST00000411553 UHRF1BP1LA0JNW5 1464 aa20.85■□□□□ 0.93
HCG11-201ENST00000411553 TTC41PQ6P2S7 1318 aa20.85■□□□□ 0.93
HCG11-201ENST00000411553 MAGEB6Q8N7X4 407 aa20.84■□□□□ 0.93
HCG11-201ENST00000411553 MRPS9P82933 396 aaKnown RBP20.84■□□□□ 0.93
HCG11-201ENST00000411553 NFATC2IPQ8NCF5 419 aa20.84■□□□□ 0.93
HCG11-201ENST00000411553 LMBR1Q8WVP7 490 aa20.84■□□□□ 0.93
HCG11-201ENST00000411553 MIGA1Q8NAN2 632 aa20.83■□□□□ 0.93
HCG11-201ENST00000411553 CTAGE15A4D2H0 777 aa20.83■□□□□ 0.93
HCG11-201ENST00000411553 TACC1O75410 805 aa20.83■□□□□ 0.93
HCG11-201ENST00000411553 LDHBP07195 334 aaKnown RBP20.83■□□□□ 0.93
HCG11-201ENST00000411553 CTAGE8P0CG41 777 aa20.83■□□□□ 0.93
HCG11-201ENST00000411553 CTAGE6Q86UF2 777 aa20.83■□□□□ 0.93
HCG11-201ENST00000411553 USP48Q86UV5 1035 aa20.83■□□□□ 0.93
HCG11-201ENST00000411553 CTAGE4Q8IX94 777 aa20.83■□□□□ 0.93
HCG11-201ENST00000411553 LRRC59Q96AG4 307 aaKnown RBP20.83■□□□□ 0.92
HCG11-201ENST00000411553 SPTLC2O15270 562 aa20.83■□□□□ 0.92
HCG11-201ENST00000411553 BMS1Q14692 1282 aaKnown RBP20.83■□□□□ 0.92
HCG11-201ENST00000411553 GNA11P29992 359 aa20.82■□□□□ 0.92
HCG11-201ENST00000411553 MTHFSDQ2M296 383 aaKnown RBP20.82■□□□□ 0.92
HCG11-201ENST00000411553 TTC16Q8NEE8 873 aa20.82■□□□□ 0.92
HCG11-201ENST00000411553 HS2ST1Q7LGA3 356 aa20.82■□□□□ 0.92
HCG11-201ENST00000411553 FAM212AQ96EL1 285 aa20.82■□□□□ 0.92
HCG11-201ENST00000411553 CCDC77Q9BR77 488 aa20.82■□□□□ 0.92
HCG11-201ENST00000411553 WDR7Q9Y4E6 1490 aa20.82■□□□□ 0.92
HCG11-201ENST00000411553 RIMBP2O15034 1052 aa20.82■□□□□ 0.92
HCG11-201ENST00000411553 F13A1P00488 732 aa20.82■□□□□ 0.92
HCG11-201ENST00000411553 RTL1A6NKG5 1358 aa20.82■□□□□ 0.92
HCG11-201ENST00000411553 BICDL2A1A5D9 508 aa20.82■□□□□ 0.92
HCG11-201ENST00000411553 AOPEPQ8N6M6 819 aa20.82■□□□□ 0.92
HCG11-201ENST00000411553 GTPBP4Q9BZE4 634 aaKnown RBP20.82■□□□□ 0.92
HCG11-201ENST00000411553 EEF2P13639 858 aaKnown RBP20.82■□□□□ 0.92
HCG11-201ENST00000411553 GJC1P36383 396 aa20.82■□□□□ 0.92
HCG11-201ENST00000411553 ARL1P40616 181 aaPredicted RBP20.82■□□□□ 0.92
HCG11-201ENST00000411553 OTUD6BQ8N6M0 293 aa20.82■□□□□ 0.92
HCG11-201ENST00000411553 HELBQ8NG08 1087 aaPredicted RBP20.82■□□□□ 0.92
HCG11-201ENST00000411553 FAM200AQ8TCP9 573 aa20.82■□□□□ 0.92
HCG11-201ENST00000411553 PTGS1P23219 599 aa20.81■□□□□ 0.92
HCG11-201ENST00000411553 DACT1Q9NYF0 836 aa20.81■□□□□ 0.92
HCG11-201ENST00000411553 NBPF14Q5TI25 921 aa20.81■□□□□ 0.92
HCG11-201ENST00000411553 CABLES1Q8TDN4 633 aa20.81■□□□□ 0.92
HCG11-201ENST00000411553 SKILP12757 684 aa20.81■□□□□ 0.92
HCG11-201ENST00000411553 DPH6Q7L8W6 267 aa20.81■□□□□ 0.92
HCG11-201ENST00000411553 CALCOCO1Q9P1Z2 691 aa20.81■□□□□ 0.92
HCG11-201ENST00000411553 GTF2F1P35269 517 aaKnown RBP eCLIP20.81■□□□□ 0.92
HCG11-201ENST00000411553 RNF216Q9NWF9 866 aaPredicted RBP20.81■□□□□ 0.92
HCG11-201ENST00000411553 FLT4P35916 1363 aa20.81■□□□□ 0.92
HCG11-201ENST00000411553 KIF4AO95239 1232 aa20.8■□□□□ 0.92
HCG11-201ENST00000411553 GSTA5Q7RTV2 222 aa20.8■□□□□ 0.92
HCG11-201ENST00000411553 ARID5AQ03989 594 aa20.8■□□□□ 0.92
HCG11-201ENST00000411553 ASXL1Q8IXJ9 1541 aa20.8■□□□□ 0.92
HCG11-201ENST00000411553 ATP2A1O14983 1001 aa20.8■□□□□ 0.92
HCG11-201ENST00000411553 PLCH2O75038 1416 aa20.8■□□□□ 0.92
HCG11-201ENST00000411553 KRT83P78385 493 aa20.8■□□□□ 0.92
HCG11-201ENST00000411553 RIMS2Q9UQ26 1411 aa20.8■□□□□ 0.92
HCG11-201ENST00000411553 DCAF5Q96JK2 942 aa20.8■□□□□ 0.92
HCG11-201ENST00000411553 TICAM2Q86XR7 235 aa20.79■□□□□ 0.92
HCG11-201ENST00000411553 MSANTD4Q8NCY6 345 aa20.79■□□□□ 0.92
HCG11-201ENST00000411553 TFCP2Q12800 502 aa20.79■□□□□ 0.92
HCG11-201ENST00000411553 C16orf71Q8IYS4 520 aaPredicted RBP20.79■□□□□ 0.92
HCG11-201ENST00000411553 MCM7P33993 719 aa20.79■□□□□ 0.92
HCG11-201ENST00000411553 DNM1Q05193 864 aaKnown RBP20.79■□□□□ 0.92
HCG11-201ENST00000411553 MAP3K1Q13233 1512 aa20.79■□□□□ 0.92
HCG11-201ENST00000411553 TMEM110-MUSTN1A8MSY1 372 aa20.79■□□□□ 0.92
HCG11-201ENST00000411553 PRDM10Q9NQV6 1147 aa20.79■□□□□ 0.92
HCG11-201ENST00000411553 DNAJC25Q9H1X3 360 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms