RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 MEIS3Q99687 375 aa13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 PANK2Q9BZ23 570 aa13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 PRDM10Q9NQV6 1147 aa13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 MCM9Q9NXL9 1143 aa13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 SYNMO15061 1565 aa13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 USP6P35125 1406 aa13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 PYM1Q9BRP8 204 aaKnown RBP13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 ARHGEF10LQ9HCE6 1279 aa13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 PAG1Q9NWQ8 432 aa13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 CFAP65Q6ZU64 1925 aaKnown RBP13.55□□□□□ -0.24
RAPGEF3-204ENST00000405493 CHL1O00533 1208 aa13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 IL6STP40189 918 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 IARSP41252 1262 aaKnown RBP13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 IVNS1ABPQ9Y6Y0 642 aa13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 ABCA9Q8IUA7 1624 aa13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 CBX1P83916 185 aa13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 HELBQ8NG08 1087 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 LRRC27Q9C0I9 530 aa13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 DYNC1I1O14576 645 aa13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 KIF22Q14807 665 aa13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 USP48Q86UV5 1035 aa13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 ERMNQ8TAM6 284 aa13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 NBPF7P0C2Y1 421 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 MCMDC2Q4G0Z9 681 aa13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 FILIP1Q7Z7B0 1213 aa13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 IBSPP21815 317 aaPredicted RBP13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 IFIT1BQ5T764 474 aaKnown RBP13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 CCDC181Q5TID7 509 aa13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 OTUD7BQ6GQQ9 843 aa13.54□□□□□ -0.24
RAPGEF3-204ENST00000405493 DCAF15Q66K64 600 aa13.53□□□□□ -0.24
RAPGEF3-204ENST00000405493 CCDC150Q8NCX0 1101 aa13.53□□□□□ -0.24
RAPGEF3-204ENST00000405493 VAT1LQ9HCJ6 419 aa13.53□□□□□ -0.24
RAPGEF3-204ENST00000405493 ADCY10Q96PN6 1610 aa13.53□□□□□ -0.24
RAPGEF3-204ENST00000405493 DCPSQ96C86 337 aaKnown RBP13.53□□□□□ -0.24
RAPGEF3-204ENST00000405493 SEPT11Q9NVA2 429 aaKnown RBP13.53□□□□□ -0.24
RAPGEF3-204ENST00000405493 LIMCH1Q9UPQ0 1083 aa13.53□□□□□ -0.24
RAPGEF3-204ENST00000405493 PLS1Q14651 629 aa13.53□□□□□ -0.24
RAPGEF3-204ENST00000405493 CCDC82Q8N4S0 544 aa13.53□□□□□ -0.24
RAPGEF3-204ENST00000405493 LPIN2Q92539 896 aa13.53□□□□□ -0.24
RAPGEF3-204ENST00000405493 RNF113AO15541 343 aaKnown RBP13.52□□□□□ -0.24
RAPGEF3-204ENST00000405493 BMP2KLQ5H9B9 411 aa13.52□□□□□ -0.24
RAPGEF3-204ENST00000405493 TTC22Q5TAA0 569 aa13.52□□□□□ -0.24
RAPGEF3-204ENST00000405493 CSADQ9Y600 493 aa13.52□□□□□ -0.24
RAPGEF3-204ENST00000405493 CCT2P78371 535 aaKnown RBP13.52□□□□□ -0.24
RAPGEF3-204ENST00000405493 LEKR1Q6ZMV7 388 aa13.52□□□□□ -0.24
RAPGEF3-204ENST00000405493 CCDC183Q5T5S1 534 aa13.52□□□□□ -0.25
RAPGEF3-204ENST00000405493 TCP11L1Q9NUJ3 509 aa13.52□□□□□ -0.25
RAPGEF3-204ENST00000405493 ERBB3P21860 1342 aa13.52□□□□□ -0.25
RAPGEF3-204ENST00000405493 GCC2Q8IWJ2 1684 aa13.52□□□□□ -0.25
RAPGEF3-204ENST00000405493 TET3O43151 1660 aa13.52□□□□□ -0.25
RAPGEF3-204ENST00000405493 PABPC4Q13310 644 aaKnown RBP eCLIP13.52□□□□□ -0.25
RAPGEF3-204ENST00000405493 SMARCC2Q8TAQ2 1214 aa13.52□□□□□ -0.25
RAPGEF3-204ENST00000405493 GJD4Q96KN9 370 aaPredicted RBP13.52□□□□□ -0.25
RAPGEF3-204ENST00000405493 NEK1Q96PY6 1258 aa13.52□□□□□ -0.25
RAPGEF3-204ENST00000405493 EIF4A1P60842 406 aaKnown RBP13.52□□□□□ -0.25
RAPGEF3-204ENST00000405493 SULF1Q8IWU6 871 aa13.52□□□□□ -0.25
RAPGEF3-204ENST00000405493 SLC5A4Q9NY91 659 aa13.52□□□□□ -0.25
RAPGEF3-204ENST00000405493 SAMM50Q9Y512 469 aa13.52□□□□□ -0.25
RAPGEF3-204ENST00000405493 RTL9Q8NET4 1388 aa13.52□□□□□ -0.25
RAPGEF3-204ENST00000405493 METAP2P50579 478 aaKnown RBP eCLIP13.51□□□□□ -0.25
RAPGEF3-204ENST00000405493 CRKLP46109 303 aaKnown RBP13.51□□□□□ -0.25
RAPGEF3-204ENST00000405493 SLC27A3Q5K4L6 730 aa13.51□□□□□ -0.25
RAPGEF3-204ENST00000405493 CALML4Q96GE6 196 aa13.51□□□□□ -0.25
RAPGEF3-204ENST00000405493 TSG101Q99816 390 aa13.51□□□□□ -0.25
RAPGEF3-204ENST00000405493 AMPD3Q01432 767 aa13.51□□□□□ -0.25
RAPGEF3-204ENST00000405493 CFAP100Q494V2 611 aa13.51□□□□□ -0.25
RAPGEF3-204ENST00000405493 FGFR1OPO95684 399 aaKnown RBP13.51□□□□□ -0.25
RAPGEF3-204ENST00000405493 GRIPAP1Q4V328 841 aa13.51□□□□□ -0.25
RAPGEF3-204ENST00000405493 AXDND1Q5T1B0 1012 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF3-204ENST00000405493 AS3MTQ9HBK9 375 aa13.51□□□□□ -0.25
RAPGEF3-204ENST00000405493 BMP15O95972 392 aa13.51□□□□□ -0.25
RAPGEF3-204ENST00000405493 GJB2P29033 226 aa13.51□□□□□ -0.25
RAPGEF3-204ENST00000405493 NCBP1Q09161 790 aaKnown RBP13.51□□□□□ -0.25
RAPGEF3-204ENST00000405493 HDAC1Q13547 482 aaPredicted RBP13.51□□□□□ -0.25
RAPGEF3-204ENST00000405493 USPL1Q5W0Q7 1092 aa13.51□□□□□ -0.25
RAPGEF3-204ENST00000405493 PRDM15P57071 1507 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF3-204ENST00000405493 MAGEB6Q8N7X4 407 aa13.5□□□□□ -0.25
RAPGEF3-204ENST00000405493 TNS3Q68CZ2 1445 aa13.5□□□□□ -0.25
RAPGEF3-204ENST00000405493 EIF5P55010 431 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-204ENST00000405493 USP16Q9Y5T5 823 aa13.5□□□□□ -0.25
RAPGEF3-204ENST00000405493 SCAND2PQ9GZW5 306 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF3-204ENST00000405493 BICC1Q9H694 974 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-204ENST00000405493 DALRD3Q5D0E6 543 aaKnown RBP13.5□□□□□ -0.25
RAPGEF3-204ENST00000405493 OVOS2A0A0G2JMS6 1433 aa13.5□□□□□ -0.25
RAPGEF3-204ENST00000405493 OVOS2A0A0J9YW53 1432 aa13.5□□□□□ -0.25
RAPGEF3-204ENST00000405493 OVOS2Q6IE36 1432 aa13.5□□□□□ -0.25
RAPGEF3-204ENST00000405493 KIF1BO60333 1816 aa13.49□□□□□ -0.25
RAPGEF3-204ENST00000405493 NUCB1Q02818 461 aa13.49□□□□□ -0.25
RAPGEF3-204ENST00000405493 USP25Q9UHP3 1055 aa13.49□□□□□ -0.25
RAPGEF3-204ENST00000405493 SPATA31E1Q6ZUB1 1445 aa13.49□□□□□ -0.25
RAPGEF3-204ENST00000405493 ADRA2BP18089 450 aa13.49□□□□□ -0.25
RAPGEF3-204ENST00000405493 TFCP2Q12800 502 aa13.49□□□□□ -0.25
RAPGEF3-204ENST00000405493 CCDC144CPQ8IYA2 1237 aa13.49□□□□□ -0.25
RAPGEF3-204ENST00000405493 NAP1L4Q99733 375 aaKnown RBP13.49□□□□□ -0.25
RAPGEF3-204ENST00000405493 BBOX1O75936 387 aa13.49□□□□□ -0.25
RAPGEF3-204ENST00000405493 MAP3K15Q6ZN16 1313 aa13.49□□□□□ -0.25
RAPGEF3-204ENST00000405493 SERPINB2P05120 415 aa13.49□□□□□ -0.25
RAPGEF3-204ENST00000405493 GCKRQ14397 625 aa13.49□□□□□ -0.25
RAPGEF3-204ENST00000405493 DRC1Q96MC2 740 aa13.49□□□□□ -0.25
RAPGEF3-204ENST00000405493 PTPRMP28827 1452 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms