RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 PSEN1P49768 467 aa12.28□□□□□ -0.44
NUP43-204ENST00000403890 EIF4A1P60842 406 aaKnown RBP12.28□□□□□ -0.44
NUP43-204ENST00000403890 TTLL12Q14166 644 aaPredicted RBP12.28□□□□□ -0.44
NUP43-204ENST00000403890 OTOP1Q7RTM1 612 aa12.28□□□□□ -0.44
NUP43-204ENST00000403890 SLC17A8Q8NDX2 589 aa12.28□□□□□ -0.44
NUP43-204ENST00000403890 NECTIN2Q92692 538 aa12.28□□□□□ -0.44
NUP43-204ENST00000403890 CFAP53Q96M91 514 aa12.28□□□□□ -0.44
NUP43-204ENST00000403890 ERBB4Q15303 1308 aa12.28□□□□□ -0.44
NUP43-204ENST00000403890 PITPNM2Q9BZ72 1349 aa12.28□□□□□ -0.44
NUP43-204ENST00000403890 PAPPA2Q9BXP8 1791 aa12.28□□□□□ -0.44
NUP43-204ENST00000403890 G3V3G9 751 aa12.27□□□□□ -0.45
NUP43-204ENST00000403890 U2AF1L5P0DN76 240 aaPredicted RBP12.27□□□□□ -0.45
NUP43-204ENST00000403890 GPSM2P81274 684 aa12.27□□□□□ -0.45
NUP43-204ENST00000403890 U2AF1Q01081 240 aaKnown RBP eCLIP12.27□□□□□ -0.45
NUP43-204ENST00000403890 NLRP10Q86W26 655 aa12.27□□□□□ -0.45
NUP43-204ENST00000403890 PDCD7Q8N8D1 485 aaKnown RBP12.27□□□□□ -0.45
NUP43-204ENST00000403890 AGBL3Q8NEM8 1001 aa12.27□□□□□ -0.45
NUP43-204ENST00000403890 ZC3H12CQ9C0D7 883 aaKnown RBP12.27□□□□□ -0.45
NUP43-204ENST00000403890 TRMT112Q9UI30 125 aaKnown RBP12.27□□□□□ -0.45
NUP43-204ENST00000403890 SH3TC1Q8TE82 1336 aa12.27□□□□□ -0.45
NUP43-204ENST00000403890 TCIRG1Q13488 830 aa12.26□□□□□ -0.45
NUP43-204ENST00000403890 CNGB1Q14028 1251 aaPredicted RBP12.26□□□□□ -0.45
NUP43-204ENST00000403890 HSP90AB3PQ58FF7 597 aa12.26□□□□□ -0.45
NUP43-204ENST00000403890 PRAMEF18Q5VWM3 479 aa12.26□□□□□ -0.45
NUP43-204ENST00000403890 LAMB4A4D0S4 1761 aa12.25□□□□□ -0.45
NUP43-204ENST00000403890 SZT2Q5T011 3432 aa12.25□□□□□ -0.45
NUP43-204ENST00000403890 USP17L8P0C7I0 530 aa12.25□□□□□ -0.45
NUP43-204ENST00000403890 NF2P35240 595 aa12.25□□□□□ -0.45
NUP43-204ENST00000403890 INHBEP58166 350 aa12.25□□□□□ -0.45
NUP43-204ENST00000403890 PDAP1Q13442 181 aaKnown RBP12.25□□□□□ -0.45
NUP43-204ENST00000403890 RSBN1LQ6PCB5 846 aaPredicted RBP12.25□□□□□ -0.45
NUP43-204ENST00000403890 LRP10Q7Z4F1 713 aa12.25□□□□□ -0.45
NUP43-204ENST00000403890 TBC1D16Q8TBP0 767 aa12.25□□□□□ -0.45
NUP43-204ENST00000403890 CELF1Q92879 486 aaKnown RBP12.25□□□□□ -0.45
NUP43-204ENST00000403890 ARMC5Q96C12 935 aa12.25□□□□□ -0.45
NUP43-204ENST00000403890 THUMPD2Q9BTF0 503 aaKnown RBP12.25□□□□□ -0.45
NUP43-204ENST00000403890 MYOZ2Q9NPC6 264 aa12.25□□□□□ -0.45
NUP43-204ENST00000403890 SCAF8Q9UPN6 1271 aaKnown RBP12.25□□□□□ -0.45
NUP43-204ENST00000403890 PTPN22Q9Y2R2 807 aa12.25□□□□□ -0.45
NUP43-204ENST00000403890 A0A0C4DFX4 3053 aa12.25□□□□□ -0.45
NUP43-204ENST00000403890 HTTP42858 3142 aa12.25□□□□□ -0.45
NUP43-204ENST00000403890 ANKRD36CQ5JPF3 1778 aa12.25□□□□□ -0.45
NUP43-204ENST00000403890 PTPN12Q05209 780 aaKnown RBP12.24□□□□□ -0.45
NUP43-204ENST00000403890 PDIA6Q15084 440 aa12.24□□□□□ -0.45
NUP43-204ENST00000403890 ARMC9Q7Z3E5 817 aa12.24□□□□□ -0.45
NUP43-204ENST00000403890 SPOCK2Q92563 424 aa12.24□□□□□ -0.45
NUP43-204ENST00000403890 ERO1AQ96HE7 468 aa12.24□□□□□ -0.45
NUP43-204ENST00000403890 H0YGN5 161 aa12.23□□□□□ -0.45
NUP43-204ENST00000403890 SF3B3Q15393 1217 aaKnown RBP12.23□□□□□ -0.45
NUP43-204ENST00000403890 SPRYD7Q5W111 196 aa12.23□□□□□ -0.45
NUP43-204ENST00000403890 GMLQ99445 158 aa12.23□□□□□ -0.45
NUP43-204ENST00000403890 TAF1P21675 1872 aa12.23□□□□□ -0.45
NUP43-204ENST00000403890 CENPFP49454 3210 aa12.22□□□□□ -0.45
NUP43-204ENST00000403890 MANSC4A6NHS7 340 aaPredicted RBP12.22□□□□□ -0.45
NUP43-204ENST00000403890 EIF2S2P20042 333 aaKnown RBP12.22□□□□□ -0.45
NUP43-204ENST00000403890 RPS8P62241 208 aaKnown RBP12.22□□□□□ -0.45
NUP43-204ENST00000403890 LAMB2P55268 1798 aa12.22□□□□□ -0.45
NUP43-204ENST00000403890 LRRC37AA6NMS7 1700 aa12.22□□□□□ -0.45
NUP43-204ENST00000403890 ZNF609O15014 1411 aa12.21□□□□□ -0.45
NUP43-204ENST00000403890 ANXA1P04083 346 aa12.21□□□□□ -0.45
NUP43-204ENST00000403890 PROSER3Q2NL68 480 aa12.21□□□□□ -0.45
NUP43-204ENST00000403890 NBPF9Q3BBW0 867 aa12.21□□□□□ -0.45
NUP43-204ENST00000403890 LDLRAD1Q5T700 205 aa12.21□□□□□ -0.45
NUP43-204ENST00000403890 COPS6Q7L5N1 327 aa12.21□□□□□ -0.45
NUP43-204ENST00000403890 EFCC1Q9HA90 598 aa12.21□□□□□ -0.45
NUP43-204ENST00000403890 PODXL2Q9NZ53 605 aa12.21□□□□□ -0.45
NUP43-204ENST00000403890 SCN9AQ15858 1988 aa12.2□□□□□ -0.46
NUP43-204ENST00000403890 USP17L3A6NCW0 530 aa12.2□□□□□ -0.46
NUP43-204ENST00000403890 USP17L4A6NCW7 530 aa12.2□□□□□ -0.46
NUP43-204ENST00000403890 UFL1O94874 794 aa12.2□□□□□ -0.46
NUP43-204ENST00000403890 AIMP1Q12904 312 aaKnown RBP12.2□□□□□ -0.46
NUP43-204ENST00000403890 PRKG1Q13976 671 aa12.2□□□□□ -0.46
NUP43-204ENST00000403890 USP17L1Q7RTZ2 530 aa12.2□□□□□ -0.46
NUP43-204ENST00000403890 CD99L2Q8TCZ2 262 aa12.2□□□□□ -0.46
NUP43-204ENST00000403890 SLC10A4Q96EP9 437 aa12.2□□□□□ -0.46
NUP43-204ENST00000403890 ANKIB1Q9P2G1 1089 aa12.2□□□□□ -0.46
NUP43-204ENST00000403890 GGA1Q9UJY5 639 aa12.2□□□□□ -0.46
NUP43-204ENST00000403890 RBBP6Q7Z6E9 1792 aaKnown RBP12.2□□□□□ -0.46
NUP43-204ENST00000403890 BRCA2P51587 3418 aa12.19□□□□□ -0.46
NUP43-204ENST00000403890 NEFMP07197 916 aa12.19□□□□□ -0.46
NUP43-204ENST00000403890 SLC4A8Q2Y0W8 1093 aa12.19□□□□□ -0.46
NUP43-204ENST00000403890 NBPF11Q86T75 865 aa12.19□□□□□ -0.46
NUP43-204ENST00000403890 OGFOD1Q8N543 542 aa12.19□□□□□ -0.46
NUP43-204ENST00000403890 XAGE3Q8WTP9 111 aa12.19□□□□□ -0.46
NUP43-204ENST00000403890 ZNF428Q96B54 188 aa12.19□□□□□ -0.46
NUP43-204ENST00000403890 FAM89AQ96GI7 184 aa12.19□□□□□ -0.46
NUP43-204ENST00000403890 ZNF333Q96JL9 665 aa12.19□□□□□ -0.46
NUP43-204ENST00000403890 DDX60Q8IY21 1712 aaKnown RBP12.18□□□□□ -0.46
NUP43-204ENST00000403890 IGF2BP3O00425 579 aaKnown RBP eCLIP12.18□□□□□ -0.46
NUP43-204ENST00000403890 WNT10BO00744 389 aa12.18□□□□□ -0.46
NUP43-204ENST00000403890 SP3Q02447 781 aa12.18□□□□□ -0.46
NUP43-204ENST00000403890 OTUD7BQ6GQQ9 843 aa12.18□□□□□ -0.46
NUP43-204ENST00000403890 PODNQ7Z5L7 613 aa12.18□□□□□ -0.46
NUP43-204ENST00000403890 RBM27Q9P2N5 1060 aaKnown RBP12.18□□□□□ -0.46
NUP43-204ENST00000403890 CIZ1Q9ULV3 898 aaPredicted RBP12.18□□□□□ -0.46
NUP43-204ENST00000403890 ANGEL1Q9UNK9 670 aaKnown RBP12.18□□□□□ -0.46
NUP43-204ENST00000403890 KDM3BQ7LBC6 1761 aa12.18□□□□□ -0.46
NUP43-204ENST00000403890 RANBP2P49792 3224 aaKnown RBP12.17□□□□□ -0.46
NUP43-204ENST00000403890 ZBTB48P10074 688 aaPredicted RBP12.17□□□□□ -0.46
NUP43-204ENST00000403890 SLC9C1Q4G0N8 1177 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms