RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 PLCG2P16885 1265 aa16.37■□□□□ 0.21
PCDHA11-201ENST00000398640 SFPQP23246 707 aaKnown RBP eCLIP16.37■□□□□ 0.21
PCDHA11-201ENST00000398640 EAPPQ56P03 285 aaPredicted RBP16.37■□□□□ 0.21
PCDHA11-201ENST00000398640 GSTTP1A0A1W2PQM5 241 aa16.37■□□□□ 0.21
PCDHA11-201ENST00000398640 CASQ1P31415 396 aa16.37■□□□□ 0.21
PCDHA11-201ENST00000398640 CCDC12Q8WUD4 166 aaPredicted RBP16.37■□□□□ 0.21
PCDHA11-201ENST00000398640 FAM135BQ49AJ0 1406 aa16.37■□□□□ 0.21
PCDHA11-201ENST00000398640 VPS36Q86VN1 386 aa16.37■□□□□ 0.21
PCDHA11-201ENST00000398640 C2CD5Q86YS7 1000 aa16.37■□□□□ 0.21
PCDHA11-201ENST00000398640 CALML4Q96GE6 196 aa16.37■□□□□ 0.21
PCDHA11-201ENST00000398640 ARHGAP31Q2M1Z3 1444 aa16.37■□□□□ 0.21
PCDHA11-201ENST00000398640 NLGN1Q8N2Q7 840 aa16.37■□□□□ 0.21
PCDHA11-201ENST00000398640 WDR17Q8IZU2 1322 aa16.37■□□□□ 0.21
PCDHA11-201ENST00000398640 HCLS1P14317 486 aaPredicted RBP16.36■□□□□ 0.21
PCDHA11-201ENST00000398640 ADGRL3Q9HAR2 1447 aa16.36■□□□□ 0.21
PCDHA11-201ENST00000398640 PDE8AO60658 829 aa16.36■□□□□ 0.21
PCDHA11-201ENST00000398640 HSPA1LP34931 641 aa16.36■□□□□ 0.21
PCDHA11-201ENST00000398640 TFIP11Q9UBB9 837 aaKnown RBP16.36■□□□□ 0.21
PCDHA11-201ENST00000398640 ZNF354CQ86Y25 554 aa16.36■□□□□ 0.21
PCDHA11-201ENST00000398640 SH2B1Q9NRF2 756 aaPredicted RBP16.36■□□□□ 0.21
PCDHA11-201ENST00000398640 HELBQ8NG08 1087 aaPredicted RBP16.36■□□□□ 0.21
PCDHA11-201ENST00000398640 USP16Q9Y5T5 823 aa16.36■□□□□ 0.21
PCDHA11-201ENST00000398640 MYOM2P54296 1465 aa16.36■□□□□ 0.21
PCDHA11-201ENST00000398640 LDHBP07195 334 aaKnown RBP16.36■□□□□ 0.21
PCDHA11-201ENST00000398640 SLC26A6Q9BXS9 759 aa16.36■□□□□ 0.21
PCDHA11-201ENST00000398640 SLC4A4Q9Y6R1 1079 aa16.36■□□□□ 0.21
PCDHA11-201ENST00000398640 CTNNA2P26232 953 aa16.35■□□□□ 0.21
PCDHA11-201ENST00000398640 MTIF2P46199 727 aaKnown RBP16.35■□□□□ 0.21
PCDHA11-201ENST00000398640 CWF19L2Q2TBE0 894 aaKnown RBP16.35■□□□□ 0.21
PCDHA11-201ENST00000398640 FSIP1Q8NA03 581 aa16.35■□□□□ 0.21
PCDHA11-201ENST00000398640 UBXN4Q92575 508 aa16.35■□□□□ 0.21
PCDHA11-201ENST00000398640 KDM5AP29375 1690 aaKnown RBP16.35■□□□□ 0.21
PCDHA11-201ENST00000398640 LUZP1Q86V48 1076 aa16.35■□□□□ 0.21
PCDHA11-201ENST00000398640 SPATA31A3Q5VYP0 1347 aa16.35■□□□□ 0.21
PCDHA11-201ENST00000398640 KIF5CO60282 957 aa16.35■□□□□ 0.21
PCDHA11-201ENST00000398640 CCDC24Q8N4L8 307 aa16.35■□□□□ 0.21
PCDHA11-201ENST00000398640 ARHGAP45Q92619 1136 aa16.35■□□□□ 0.21
PCDHA11-201ENST00000398640 FAM89AQ96GI7 184 aa16.35■□□□□ 0.21
PCDHA11-201ENST00000398640 SCAND2PQ9GZW5 306 aaPredicted RBP16.35■□□□□ 0.21
PCDHA11-201ENST00000398640 BCCIPQ9P287 314 aaKnown RBP eCLIP16.35■□□□□ 0.21
PCDHA11-201ENST00000398640 FGFR1OPO95684 399 aaKnown RBP16.35■□□□□ 0.21
PCDHA11-201ENST00000398640 GJB2P29033 226 aa16.35■□□□□ 0.21
PCDHA11-201ENST00000398640 CCDC183Q5T5S1 534 aa16.35■□□□□ 0.21
PCDHA11-201ENST00000398640 LIMCH1Q9UPQ0 1083 aa16.35■□□□□ 0.21
PCDHA11-201ENST00000398640 KIF4BQ2VIQ3 1234 aa16.34■□□□□ 0.21
PCDHA11-201ENST00000398640 CCDC40Q4G0X9 1142 aa16.34■□□□□ 0.21
PCDHA11-201ENST00000398640 PTPRTO14522 1441 aa16.34■□□□□ 0.21
PCDHA11-201ENST00000398640 CLTCQ00610 1675 aaKnown RBP16.34■□□□□ 0.21
PCDHA11-201ENST00000398640 MRPL50Q8N5N7 158 aaKnown RBP16.34■□□□□ 0.21
PCDHA11-201ENST00000398640 PTPRMP28827 1452 aa16.34■□□□□ 0.21
PCDHA11-201ENST00000398640 IARSP41252 1262 aaKnown RBP16.34■□□□□ 0.21
PCDHA11-201ENST00000398640 CLIP2Q9UDT6 1046 aa16.34■□□□□ 0.21
PCDHA11-201ENST00000398640 TCP11L1Q9NUJ3 509 aa16.33■□□□□ 0.21
PCDHA11-201ENST00000398640 URI1O94763 535 aaPredicted RBP16.33■□□□□ 0.21
PCDHA11-201ENST00000398640 MAP2K1Q02750 393 aaPredicted RBP16.33■□□□□ 0.21
PCDHA11-201ENST00000398640 CCDC91Q7Z6B0 441 aa16.33■□□□□ 0.21
PCDHA11-201ENST00000398640 ARHGEF25Q86VW2 580 aa16.33■□□□□ 0.21
PCDHA11-201ENST00000398640 CRACR2AQ9BSW2 395 aa16.33■□□□□ 0.21
PCDHA11-201ENST00000398640 LOC102724428A0A0B4J2F2 783 aa16.33■□□□□ 0.2
PCDHA11-201ENST00000398640 METAP2P50579 478 aaKnown RBP eCLIP16.33■□□□□ 0.2
PCDHA11-201ENST00000398640 SIK1P57059 783 aa16.33■□□□□ 0.2
PCDHA11-201ENST00000398640 TRMT1Q9NXH9 659 aaKnown RBP16.33■□□□□ 0.2
PCDHA11-201ENST00000398640 ANKARQ7Z5J8 1434 aa16.33■□□□□ 0.2
PCDHA11-201ENST00000398640 PPIP5K2O43314 1243 aa16.33■□□□□ 0.2
PCDHA11-201ENST00000398640 PRC1O43663 620 aa16.33■□□□□ 0.2
PCDHA11-201ENST00000398640 PTPN14Q15678 1187 aa16.33■□□□□ 0.2
PCDHA11-201ENST00000398640 HEATR3Q7Z4Q2 680 aa16.33■□□□□ 0.2
PCDHA11-201ENST00000398640 PODXL2Q9NZ53 605 aa16.33■□□□□ 0.2
PCDHA11-201ENST00000398640 INSRP06213 1382 aa16.33■□□□□ 0.2
PCDHA11-201ENST00000398640 METTL22Q9BUU2 404 aaPredicted RBP16.33■□□□□ 0.2
PCDHA11-201ENST00000398640 KIF20AO95235 890 aa16.32■□□□□ 0.2
PCDHA11-201ENST00000398640 PARD3Q8TEW0 1356 aa16.32■□□□□ 0.2
PCDHA11-201ENST00000398640 MAGEB6P1A0A0J9YX57 407 aa16.32■□□□□ 0.2
PCDHA11-201ENST00000398640 ATF5Q9Y2D1 282 aaPredicted RBP16.32■□□□□ 0.2
PCDHA11-201ENST00000398640 IFFO1Q0D2I5 559 aa16.32■□□□□ 0.2
PCDHA11-201ENST00000398640 RBM27Q9P2N5 1060 aaKnown RBP16.32■□□□□ 0.2
PCDHA11-201ENST00000398640 MAST3O60307 1309 aa16.32■□□□□ 0.2
PCDHA11-201ENST00000398640 TMCO5BA8MYB1 307 aa16.32■□□□□ 0.2
PCDHA11-201ENST00000398640 ZSCAN12O43309 604 aa16.32■□□□□ 0.2
PCDHA11-201ENST00000398640 ITGA6P23229 1130 aa16.32■□□□□ 0.2
PCDHA11-201ENST00000398640 ZFYP08048 801 aaPredicted RBP16.32■□□□□ 0.2
PCDHA11-201ENST00000398640 HOXB7P09629 217 aa16.32■□□□□ 0.2
PCDHA11-201ENST00000398640 PRPF4BQ13523 1007 aaKnown RBP16.32■□□□□ 0.2
PCDHA11-201ENST00000398640 HOOK2Q96ED9 719 aa16.32■□□□□ 0.2
PCDHA11-201ENST00000398640 DENND2AQ9ULE3 1009 aa16.32■□□□□ 0.2
PCDHA11-201ENST00000398640 RTL1A6NKG5 1358 aa16.31■□□□□ 0.2
PCDHA11-201ENST00000398640 H7C1D1 291 aa16.31■□□□□ 0.2
PCDHA11-201ENST00000398640 UBE4AQ14139 1066 aa16.31■□□□□ 0.2
PCDHA11-201ENST00000398640 IFIT1BQ5T764 474 aaKnown RBP16.31■□□□□ 0.2
PCDHA11-201ENST00000398640 GOLGA6L10A0A0M3HER8 536 aa16.31■□□□□ 0.2
PCDHA11-201ENST00000398640 ADGRB3O60242 1522 aa16.31■□□□□ 0.2
PCDHA11-201ENST00000398640 SPATA31A6Q5VVP1 1343 aa16.31■□□□□ 0.2
PCDHA11-201ENST00000398640 USP6P35125 1406 aa16.31■□□□□ 0.2
PCDHA11-201ENST00000398640 SP4Q02446 784 aa16.31■□□□□ 0.2
PCDHA11-201ENST00000398640 RHPN1Q8TCX5 695 aa16.31■□□□□ 0.2
PCDHA11-201ENST00000398640 CNKSR1Q969H4 720 aa16.31■□□□□ 0.2
PCDHA11-201ENST00000398640 YEATS4O95619 227 aa16.3■□□□□ 0.2
PCDHA11-201ENST00000398640 NCOA7Q8NI08 942 aa16.3■□□□□ 0.2
PCDHA11-201ENST00000398640 MEIS3Q99687 375 aa16.3■□□□□ 0.2
PCDHA11-201ENST00000398640 PICK1Q9NRD5 415 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms