RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 PKP1Q13835 747 aa20.55■□□□□ 0.88
SCNN1A-205ENST00000396966 SKOR2Q2VWA4 1001 aaPredicted RBP20.55■□□□□ 0.88
SCNN1A-205ENST00000396966 UPF3BQ9BZI7 483 aaKnown RBP20.55■□□□□ 0.88
SCNN1A-205ENST00000396966 TAF5LO75529 589 aa20.54■□□□□ 0.88
SCNN1A-205ENST00000396966 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.54■□□□□ 0.88
SCNN1A-205ENST00000396966 NPHP1O15259 732 aa20.54■□□□□ 0.88
SCNN1A-205ENST00000396966 ZFYP08048 801 aaPredicted RBP20.54■□□□□ 0.88
SCNN1A-205ENST00000396966 ZAP70P43403 619 aa20.54■□□□□ 0.88
SCNN1A-205ENST00000396966 CREB3L3Q68CJ9 461 aa20.54■□□□□ 0.88
SCNN1A-205ENST00000396966 CCDC102BQ68D86 513 aa20.54■□□□□ 0.88
SCNN1A-205ENST00000396966 CARMIL3Q8ND23 1372 aa20.53■□□□□ 0.88
SCNN1A-205ENST00000396966 GOLGA6L22H0YM25 854 aa20.53■□□□□ 0.88
SCNN1A-205ENST00000396966 SCARF1Q14162 830 aa20.53■□□□□ 0.88
SCNN1A-205ENST00000396966 ZMYM1Q5SVZ6 1142 aa20.53■□□□□ 0.88
SCNN1A-205ENST00000396966 MYO5AQ9Y4I1 1855 aaKnown RBP20.53■□□□□ 0.88
SCNN1A-205ENST00000396966 PTMSP20962 102 aa20.53■□□□□ 0.88
SCNN1A-205ENST00000396966 ARID4AP29374 1257 aaPredicted RBP20.53■□□□□ 0.88
SCNN1A-205ENST00000396966 MCAMP43121 646 aa20.53■□□□□ 0.88
SCNN1A-205ENST00000396966 NUCB2P80303 420 aa20.53■□□□□ 0.88
SCNN1A-205ENST00000396966 CHRNDQ07001 517 aa20.53■□□□□ 0.88
SCNN1A-205ENST00000396966 TTF1Q15361 905 aaPredicted RBP20.53■□□□□ 0.88
SCNN1A-205ENST00000396966 CLEC17AQ6ZS10 378 aa20.53■□□□□ 0.88
SCNN1A-205ENST00000396966 C3orf67Q6ZVT6 689 aa20.53■□□□□ 0.88
SCNN1A-205ENST00000396966 SEC62Q99442 399 aaKnown RBP20.53■□□□□ 0.88
SCNN1A-205ENST00000396966 TM6SF1Q9BZW5 370 aa20.53■□□□□ 0.88
SCNN1A-205ENST00000396966 MRE11P49959 708 aa20.52■□□□□ 0.88
SCNN1A-205ENST00000396966 HMG20BQ9P0W2 317 aa20.52■□□□□ 0.88
SCNN1A-205ENST00000396966 SLC27A2O14975 620 aa20.52■□□□□ 0.87
SCNN1A-205ENST00000396966 RXRBP28702 533 aa20.52■□□□□ 0.87
SCNN1A-205ENST00000396966 CWC22Q9HCG8 908 aaKnown RBP20.52■□□□□ 0.87
SCNN1A-205ENST00000396966 BSDC1Q9NW68 430 aaPredicted RBP20.52■□□□□ 0.87
SCNN1A-205ENST00000396966 U3KPZ7 1027 aaPredicted RBP20.52■□□□□ 0.87
SCNN1A-205ENST00000396966 COL4A1P02462 1669 aa20.51■□□□□ 0.87
SCNN1A-205ENST00000396966 CHGBP05060 677 aa20.51■□□□□ 0.87
SCNN1A-205ENST00000396966 CASTP20810 708 aaKnown RBP20.51■□□□□ 0.87
SCNN1A-205ENST00000396966 PHKA1P46020 1223 aa20.51■□□□□ 0.87
SCNN1A-205ENST00000396966 TXNRD1Q16881 649 aa20.51■□□□□ 0.87
SCNN1A-205ENST00000396966 CCDC129Q6ZRS4 1044 aa20.51■□□□□ 0.87
SCNN1A-205ENST00000396966 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.51■□□□□ 0.87
SCNN1A-205ENST00000396966 ZSCAN25Q6NSZ9 544 aa20.5■□□□□ 0.87
SCNN1A-205ENST00000396966 TMX3Q96JJ7 454 aa20.5■□□□□ 0.87
SCNN1A-205ENST00000396966 JAKMIP1Q96N16 626 aaKnown RBP20.5■□□□□ 0.87
SCNN1A-205ENST00000396966 GRPEL1Q9HAV7 217 aa20.5■□□□□ 0.87
SCNN1A-205ENST00000396966 CYP2E1P05181 493 aaPredicted RBP20.5■□□□□ 0.87
SCNN1A-205ENST00000396966 PSMA5P28066 241 aa20.5■□□□□ 0.87
SCNN1A-205ENST00000396966 NFIXQ14938 502 aa20.5■□□□□ 0.87
SCNN1A-205ENST00000396966 MCTP1Q6DN14 999 aa20.5■□□□□ 0.87
SCNN1A-205ENST00000396966 FAM43AQ8N2R8 423 aa20.49■□□□□ 0.87
SCNN1A-205ENST00000396966 CYP46A1Q9Y6A2 500 aa20.49■□□□□ 0.87
SCNN1A-205ENST00000396966 DOCK2Q92608 1830 aa20.49■□□□□ 0.87
SCNN1A-205ENST00000396966 PI16Q6UXB8 463 aa20.49■□□□□ 0.87
SCNN1A-205ENST00000396966 GAS2L3Q86XJ1 694 aa20.49■□□□□ 0.87
SCNN1A-205ENST00000396966 TNRC6CQ9HCJ0 1690 aaKnown RBP20.49■□□□□ 0.87
SCNN1A-205ENST00000396966 TTC14Q96N46 770 aa20.48■□□□□ 0.87
SCNN1A-205ENST00000396966 ZSWIM6Q9HCJ5 1215 aa20.48■□□□□ 0.87
SCNN1A-205ENST00000396966 DDX49Q9Y6V7 483 aaKnown RBP20.48■□□□□ 0.87
SCNN1A-205ENST00000396966 PLSCR1O15162 318 aa20.48■□□□□ 0.87
SCNN1A-205ENST00000396966 ADCK5Q3MIX3 580 aa20.48■□□□□ 0.87
SCNN1A-205ENST00000396966 NOL8Q76FK4 1167 aaKnown RBP20.48■□□□□ 0.87
SCNN1A-205ENST00000396966 CNBD1Q8NA66 436 aa20.48■□□□□ 0.87
SCNN1A-205ENST00000396966 DSCC1Q9BVC3 393 aa20.48■□□□□ 0.87
SCNN1A-205ENST00000396966 MAST3O60307 1309 aa20.47■□□□□ 0.87
SCNN1A-205ENST00000396966 RPS8P62241 208 aaKnown RBP20.47■□□□□ 0.87
SCNN1A-205ENST00000396966 KRT32Q14532 448 aa20.47■□□□□ 0.87
SCNN1A-205ENST00000396966 WASHC4Q2M389 1173 aa20.47■□□□□ 0.87
SCNN1A-205ENST00000396966 TSGA10IPQ3SY00 556 aa20.47■□□□□ 0.87
SCNN1A-205ENST00000396966 RUFY3Q7L099 469 aa20.47■□□□□ 0.87
SCNN1A-205ENST00000396966 CELF1Q92879 486 aaKnown RBP20.47■□□□□ 0.87
SCNN1A-205ENST00000396966 GYS1P13807 737 aa20.47■□□□□ 0.87
SCNN1A-205ENST00000396966 SLFNL1Q499Z3 407 aa20.47■□□□□ 0.87
SCNN1A-205ENST00000396966 VPS53Q5VIR6 699 aa20.47■□□□□ 0.87
SCNN1A-205ENST00000396966 CCDC24Q8N4L8 307 aa20.47■□□□□ 0.87
SCNN1A-205ENST00000396966 APPBP2Q92624 585 aa20.47■□□□□ 0.87
SCNN1A-205ENST00000396966 PDRG1Q9NUG6 133 aa20.47■□□□□ 0.87
SCNN1A-205ENST00000396966 RPAP1Q9BWH6 1393 aaPredicted RBP20.46■□□□□ 0.87
SCNN1A-205ENST00000396966 SNAP23O00161 211 aa20.46■□□□□ 0.87
SCNN1A-205ENST00000396966 UBE4AQ14139 1066 aa20.46■□□□□ 0.87
SCNN1A-205ENST00000396966 PROM2Q8N271 834 aa20.46■□□□□ 0.87
SCNN1A-205ENST00000396966 SPATA5Q8NB90 893 aa20.46■□□□□ 0.87
SCNN1A-205ENST00000396966 MINPP1Q9UNW1 487 aa20.46■□□□□ 0.87
SCNN1A-205ENST00000396966 APBA3O96018 575 aa20.45■□□□□ 0.87
SCNN1A-205ENST00000396966 CUL4AQ13619 759 aa20.45■□□□□ 0.87
SCNN1A-205ENST00000396966 ZDHHC9Q9Y397 364 aa20.45■□□□□ 0.87
SCNN1A-205ENST00000396966 LAMA4Q16363 1823 aa20.45■□□□□ 0.86
SCNN1A-205ENST00000396966 AK2P54819 239 aa20.45■□□□□ 0.86
SCNN1A-205ENST00000396966 OSBP2Q969R2 916 aa20.45■□□□□ 0.86
SCNN1A-205ENST00000396966 ISY1Q9ULR0 285 aaKnown RBP20.45■□□□□ 0.86
SCNN1A-205ENST00000396966 MYH13Q9UKX3 1938 aa20.45■□□□□ 0.86
SCNN1A-205ENST00000396966 EP400Q96L91 3159 aa20.45■□□□□ 0.86
SCNN1A-205ENST00000396966 M0R2C6 588 aa20.44■□□□□ 0.86
SCNN1A-205ENST00000396966 KLHL40Q2TBA0 621 aa20.44■□□□□ 0.86
SCNN1A-205ENST00000396966 INTS4Q96HW7 963 aaKnown RBP20.44■□□□□ 0.86
SCNN1A-205ENST00000396966 LIMCH1Q9UPQ0 1083 aa20.44■□□□□ 0.86
SCNN1A-205ENST00000396966 HSPD1P10809 573 aaKnown RBP20.44■□□□□ 0.86
SCNN1A-205ENST00000396966 FOXD4L5Q5VV16 416 aaPredicted RBP20.44■□□□□ 0.86
SCNN1A-205ENST00000396966 BLOC1S2Q6QNY1 142 aa20.44■□□□□ 0.86
SCNN1A-205ENST00000396966 FOXD4L4Q8WXT5 416 aaPredicted RBP20.44■□□□□ 0.86
SCNN1A-205ENST00000396966 IDH1O75874 414 aaKnown RBP20.43■□□□□ 0.86
SCNN1A-205ENST00000396966 CPA1P15085 419 aa20.43■□□□□ 0.86
SCNN1A-205ENST00000396966 ADD2P35612 726 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms