RNA–Protein interactions for RNA: ENST00000395131.5

PFDN6-204, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-204ENST00000395131 WTIPA6NIX2 430 aaPredicted RBP18.2■□□□□ 0.5
PFDN6-204ENST00000395131 UFL1O94874 794 aa18.2■□□□□ 0.5
PFDN6-204ENST00000395131 LAMA3Q16787 3333 aa18.19■□□□□ 0.5
PFDN6-204ENST00000395131 SOX1O00570 391 aaPredicted RBP18.19■□□□□ 0.5
PFDN6-204ENST00000395131 PROSER3Q2NL68 480 aa18.19■□□□□ 0.5
PFDN6-204ENST00000395131 COPS6Q7L5N1 327 aa18.19■□□□□ 0.5
PFDN6-204ENST00000395131 APOBEC3FQ8IUX4 373 aaKnown RBP18.19■□□□□ 0.5
PFDN6-204ENST00000395131 OGFOD1Q8N543 542 aa18.19■□□□□ 0.5
PFDN6-204ENST00000395131 PTPN18Q99952 460 aa18.19■□□□□ 0.5
PFDN6-204ENST00000395131 GGA1Q9UJY5 639 aa18.19■□□□□ 0.5
PFDN6-204ENST00000395131 COL1A1P02452 1464 aaPredicted RBP18.19■□□□□ 0.5
PFDN6-204ENST00000395131 U2AF1L5P0DN76 240 aaPredicted RBP18.18■□□□□ 0.5
PFDN6-204ENST00000395131 U2AF1Q01081 240 aaKnown RBP eCLIP18.18■□□□□ 0.5
PFDN6-204ENST00000395131 GPR153Q6NV75 609 aa18.18■□□□□ 0.5
PFDN6-204ENST00000395131 UBE2Q1Q7Z7E8 422 aa18.18■□□□□ 0.5
PFDN6-204ENST00000395131 CFAP53Q96M91 514 aa18.18■□□□□ 0.5
PFDN6-204ENST00000395131 SHISA4Q96DD7 197 aa18.17■□□□□ 0.5
PFDN6-204ENST00000395131 COL25A1Q9BXS0 654 aaPredicted RBP18.17■□□□□ 0.5
PFDN6-204ENST00000395131 ANKIB1Q9P2G1 1089 aa18.17■□□□□ 0.5
PFDN6-204ENST00000395131 DACT2Q5SW24 774 aa18.16■□□□□ 0.5
PFDN6-204ENST00000395131 FAM89AQ96GI7 184 aa18.16■□□□□ 0.5
PFDN6-204ENST00000395131 LRCH3Q96II8 777 aa18.16■□□□□ 0.5
PFDN6-204ENST00000395131 CLMNQ96JQ2 1002 aa18.16■□□□□ 0.5
PFDN6-204ENST00000395131 HTATIP2Q9BUP3 242 aa18.16■□□□□ 0.5
PFDN6-204ENST00000395131 MYO3BQ8WXR4 1341 aa18.16■□□□□ 0.5
PFDN6-204ENST00000395131 ANXA1P04083 346 aa18.15■□□□□ 0.5
PFDN6-204ENST00000395131 ZBED3Q96IU2 234 aaPredicted RBP18.15■□□□□ 0.5
PFDN6-204ENST00000395131 FZD1Q9UP38 647 aa18.15■□□□□ 0.5
PFDN6-204ENST00000395131 NR2E3Q9Y5X4 410 aa18.15■□□□□ 0.5
PFDN6-204ENST00000395131 ZBTB7BO15156 539 aaPredicted RBP18.14■□□□□ 0.49
PFDN6-204ENST00000395131 PPP1R12BO60237 982 aaPredicted RBP18.14■□□□□ 0.49
PFDN6-204ENST00000395131 EIF2S2P20042 333 aaKnown RBP18.14■□□□□ 0.49
PFDN6-204ENST00000395131 ANKRD13DQ6ZTN6 518 aa18.14■□□□□ 0.49
PFDN6-204ENST00000395131 XAGE3Q8WTP9 111 aa18.14■□□□□ 0.49
PFDN6-204ENST00000395131 ISCA1Q9BUE6 129 aa18.14■□□□□ 0.49
PFDN6-204ENST00000395131 STXBP5LQ9Y2K9 1186 aa18.14■□□□□ 0.49
PFDN6-204ENST00000395131 UNC80Q8N2C7 3258 aa18.14■□□□□ 0.49
PFDN6-204ENST00000395131 SSC5DA1L4H1 1573 aa18.13■□□□□ 0.49
PFDN6-204ENST00000395131 GJA5P36382 358 aa18.13■□□□□ 0.49
PFDN6-204ENST00000395131 AIMP1Q12904 312 aaKnown RBP18.13■□□□□ 0.49
PFDN6-204ENST00000395131 NKX2-3Q8TAU0 364 aa18.13■□□□□ 0.49
PFDN6-204ENST00000395131 SH3TC2Q8TF17 1288 aa18.13■□□□□ 0.49
PFDN6-204ENST00000395131 DEFB129Q9H1M3 183 aa18.13■□□□□ 0.49
PFDN6-204ENST00000395131 ECM29Q5VYK3 1845 aa18.13■□□□□ 0.49
PFDN6-204ENST00000395131 SASH1O94885 1247 aa18.12■□□□□ 0.49
PFDN6-204ENST00000395131 STRIP1Q5VSL9 837 aa18.12■□□□□ 0.49
PFDN6-204ENST00000395131 PPP2R3BQ9Y5P8 575 aa18.12■□□□□ 0.49
PFDN6-204ENST00000395131 XDHP47989 1333 aa18.12■□□□□ 0.49
PFDN6-204ENST00000395131 MYCP01106 439 aaPredicted RBP18.11■□□□□ 0.49
PFDN6-204ENST00000395131 GNRH1P01148 92 aa18.11■□□□□ 0.49
PFDN6-204ENST00000395131 ATP2B4P23634 1241 aa18.11■□□□□ 0.49
PFDN6-204ENST00000395131 PRMT2P55345 433 aa18.11■□□□□ 0.49
PFDN6-204ENST00000395131 SEC31BQ9NQW1 1179 aa18.11■□□□□ 0.49
PFDN6-204ENST00000395131 IRS4O14654 1257 aaPredicted RBP18.1■□□□□ 0.49
PFDN6-204ENST00000395131 GJA8P48165 433 aa18.1■□□□□ 0.49
PFDN6-204ENST00000395131 PIAS4Q8N2W9 510 aaPredicted RBP18.1■□□□□ 0.49
PFDN6-204ENST00000395131 MS4A4AQ96JQ5 239 aa18.1■□□□□ 0.49
PFDN6-204ENST00000395131 MXD3Q9BW11 206 aa18.1■□□□□ 0.49
PFDN6-204ENST00000395131 ZFYVE28Q9HCC9 887 aa18.1■□□□□ 0.49
PFDN6-204ENST00000395131 ZSWIM8A7E2V4 1837 aa18.09■□□□□ 0.49
PFDN6-204ENST00000395131 MED23Q9ULK4 1368 aa18.09■□□□□ 0.49
PFDN6-204ENST00000395131 TRIM28Q13263 835 aaKnown RBP18.09■□□□□ 0.49
PFDN6-204ENST00000395131 PLBD2Q8NHP8 589 aa18.09■□□□□ 0.49
PFDN6-204ENST00000395131 USP2O75604 605 aaPredicted RBP18.08■□□□□ 0.48
PFDN6-204ENST00000395131 GJB1P08034 283 aa18.08■□□□□ 0.48
PFDN6-204ENST00000395131 MTFR1Q15390 333 aa18.08■□□□□ 0.48
PFDN6-204ENST00000395131 SUPT20HL1Q3ZLR7 823 aa18.08■□□□□ 0.48
PFDN6-204ENST00000395131 ANKRD13AQ8IZ07 590 aa18.08■□□□□ 0.48
PFDN6-204ENST00000395131 OTOFQ9HC10 1997 aa18.08■□□□□ 0.48
PFDN6-204ENST00000395131 IREB2P48200 963 aaKnown RBP18.07■□□□□ 0.48
PFDN6-204ENST00000395131 TAF1CQ15572 869 aaPredicted RBP18.07■□□□□ 0.48
PFDN6-204ENST00000395131 DEFB123Q8N688 67 aa18.07■□□□□ 0.48
PFDN6-204ENST00000395131 ZNF428Q96B54 188 aa18.07■□□□□ 0.48
PFDN6-204ENST00000395131 BABAM1Q9NWV8 329 aa18.07■□□□□ 0.48
PFDN6-204ENST00000395131 BMP8BP34820 402 aa18.06■□□□□ 0.48
PFDN6-204ENST00000395131 LACTBP83111 547 aaPredicted RBP18.06■□□□□ 0.48
PFDN6-204ENST00000395131 MTMR14Q8NCE2 650 aa18.06■□□□□ 0.48
PFDN6-204ENST00000395131 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.06■□□□□ 0.48
PFDN6-204ENST00000395131 TSPYL4Q9UJ04 414 aa18.06■□□□□ 0.48
PFDN6-204ENST00000395131 HSP90B1P14625 803 aaKnown RBP18.05■□□□□ 0.48
PFDN6-204ENST00000395131 BRI3BPQ8WY22 251 aa18.05■□□□□ 0.48
PFDN6-204ENST00000395131 COA1Q9GZY4 146 aa18.05■□□□□ 0.48
PFDN6-204ENST00000395131 MTMR10Q9NXD2 777 aa18.05■□□□□ 0.48
PFDN6-204ENST00000395131 ZNF804BA4D1E1 1349 aa18.04■□□□□ 0.48
PFDN6-204ENST00000395131 ATP5J2-PTCD1G3V325 749 aa18.04■□□□□ 0.48
PFDN6-204ENST00000395131 TLR2O60603 784 aa18.04■□□□□ 0.48
PFDN6-204ENST00000395131 NEFMP07197 916 aa18.04■□□□□ 0.48
PFDN6-204ENST00000395131 KIF22Q14807 665 aa18.04■□□□□ 0.48
PFDN6-204ENST00000395131 NFE2L2Q16236 605 aa18.04■□□□□ 0.48
PFDN6-204ENST00000395131 RTL5Q5HYW3 569 aaPredicted RBP18.04■□□□□ 0.48
PFDN6-204ENST00000395131 POTEDQ86YR6 584 aa18.04■□□□□ 0.48
PFDN6-204ENST00000395131 ZBTB38Q8NAP3 1195 aaPredicted RBP18.04■□□□□ 0.48
PFDN6-204ENST00000395131 OPTNQ96CV9 577 aa18.04■□□□□ 0.48
PFDN6-204ENST00000395131 PLEKHF1Q96S99 279 aa18.04■□□□□ 0.48
PFDN6-204ENST00000395131 ARHGAP39Q9C0H5 1083 aa18.04■□□□□ 0.48
PFDN6-204ENST00000395131 STAP2Q9UGK3 403 aa18.04■□□□□ 0.48
PFDN6-204ENST00000395131 CCDC152Q4G0S7 254 aa18.03■□□□□ 0.48
PFDN6-204ENST00000395131 TTLL5Q6EMB2 1281 aa18.03■□□□□ 0.48
PFDN6-204ENST00000395131 KIAA0825Q8IV33 1275 aa18.03■□□□□ 0.48
PFDN6-204ENST00000395131 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms