RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 CCDC102BQ68D86 513 aa20.53■□□□□ 0.88
SLC6A4-202ENST00000394821 AKAP11Q9UKA4 1901 aa20.52■□□□□ 0.88
SLC6A4-202ENST00000394821 IL17RAQ96F46 866 aa20.52■□□□□ 0.88
SLC6A4-202ENST00000394821 PAG1Q9NWQ8 432 aa20.52■□□□□ 0.88
SLC6A4-202ENST00000394821 ARAP2Q8WZ64 1704 aa20.52■□□□□ 0.88
SLC6A4-202ENST00000394821 HSP90AA1P07900 732 aaKnown RBP20.52■□□□□ 0.88
SLC6A4-202ENST00000394821 KLRK1P26718 216 aa20.52■□□□□ 0.88
SLC6A4-202ENST00000394821 ZAP70P43403 619 aa20.52■□□□□ 0.88
SLC6A4-202ENST00000394821 NMIQ13287 307 aaPredicted RBP20.52■□□□□ 0.88
SLC6A4-202ENST00000394821 CRY2Q49AN0 593 aa20.52■□□□□ 0.88
SLC6A4-202ENST00000394821 NRXN2Q9P2S2 1712 aa20.52■□□□□ 0.87
SLC6A4-202ENST00000394821 A0A0D9SFI3 127 aa20.51■□□□□ 0.87
SLC6A4-202ENST00000394821 ST18O60284 1047 aa20.51■□□□□ 0.87
SLC6A4-202ENST00000394821 BCAMP50895 628 aa20.51■□□□□ 0.87
SLC6A4-202ENST00000394821 DIAPH3Q9NSV4 1193 aa20.51■□□□□ 0.87
SLC6A4-202ENST00000394821 EPB41L2O43491 1005 aaKnown RBP20.51■□□□□ 0.87
SLC6A4-202ENST00000394821 ANAPC15P60006 121 aa20.51■□□□□ 0.87
SLC6A4-202ENST00000394821 LSG1Q9H089 658 aaKnown RBP20.51■□□□□ 0.87
SLC6A4-202ENST00000394821 CIZ1Q9ULV3 898 aaPredicted RBP20.51■□□□□ 0.87
SLC6A4-202ENST00000394821 SLC5A1P13866 664 aa20.5■□□□□ 0.87
SLC6A4-202ENST00000394821 MCCP23508 829 aa20.5■□□□□ 0.87
SLC6A4-202ENST00000394821 HSPA4P34932 840 aa20.5■□□□□ 0.87
SLC6A4-202ENST00000394821 GRAPQ13588 217 aa20.5■□□□□ 0.87
SLC6A4-202ENST00000394821 GRAPLQ8TC17 118 aaPredicted RBP20.5■□□□□ 0.87
SLC6A4-202ENST00000394821 RPGRQ92834 1020 aaKnown RBP20.5■□□□□ 0.87
SLC6A4-202ENST00000394821 SEC62Q99442 399 aaKnown RBP20.5■□□□□ 0.87
SLC6A4-202ENST00000394821 RAD50Q92878 1312 aa20.5■□□□□ 0.87
SLC6A4-202ENST00000394821 MYO5AQ9Y4I1 1855 aaKnown RBP20.5■□□□□ 0.87
SLC6A4-202ENST00000394821 PARP3Q9Y6F1 533 aa20.49■□□□□ 0.87
SLC6A4-202ENST00000394821 GYG1P46976 350 aa20.49■□□□□ 0.87
SLC6A4-202ENST00000394821 NEK4P51957 841 aa20.49■□□□□ 0.87
SLC6A4-202ENST00000394821 IQSEC3Q9UPP2 1182 aaPredicted RBP20.49■□□□□ 0.87
SLC6A4-202ENST00000394821 KBTBD3Q8NAB2 608 aa20.48■□□□□ 0.87
SLC6A4-202ENST00000394821 QSER1Q2KHR3 1735 aa20.48■□□□□ 0.87
SLC6A4-202ENST00000394821 MCM4P33991 863 aa20.48■□□□□ 0.87
SLC6A4-202ENST00000394821 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.48■□□□□ 0.87
SLC6A4-202ENST00000394821 KLRG2A4D1S0 409 aaPredicted RBP20.47■□□□□ 0.87
SLC6A4-202ENST00000394821 PTH1RQ03431 593 aa20.47■□□□□ 0.87
SLC6A4-202ENST00000394821 RAB3GAP1Q15042 981 aa20.47■□□□□ 0.87
SLC6A4-202ENST00000394821 ZNF589Q86UQ0 364 aaPredicted RBP20.47■□□□□ 0.87
SLC6A4-202ENST00000394821 CYP2E1P05181 493 aaPredicted RBP20.46■□□□□ 0.87
SLC6A4-202ENST00000394821 CCDC129Q6ZRS4 1044 aa20.46■□□□□ 0.87
SLC6A4-202ENST00000394821 TNPO1Q92973 898 aaKnown RBP20.46■□□□□ 0.87
SLC6A4-202ENST00000394821 GPR101Q96P66 508 aaPredicted RBP20.46■□□□□ 0.87
SLC6A4-202ENST00000394821 ARID4AP29374 1257 aaPredicted RBP20.46■□□□□ 0.87
SLC6A4-202ENST00000394821 RASGRF1Q13972 1273 aa20.46■□□□□ 0.87
SLC6A4-202ENST00000394821 TXNRD3Q86VQ6 643 aa20.46■□□□□ 0.87
SLC6A4-202ENST00000394821 BRIP1Q9BX63 1249 aa20.46■□□□□ 0.87
SLC6A4-202ENST00000394821 HMG20BQ9P0W2 317 aa20.46■□□□□ 0.87
SLC6A4-202ENST00000394821 COL11A2P13942 1736 aaPredicted RBP20.46■□□□□ 0.87
SLC6A4-202ENST00000394821 GSE1Q14687 1217 aa20.45■□□□□ 0.86
SLC6A4-202ENST00000394821 OLFM4Q6UX06 510 aa20.45■□□□□ 0.86
SLC6A4-202ENST00000394821 RBM17Q96I25 401 aaKnown RBP20.45■□□□□ 0.86
SLC6A4-202ENST00000394821 PIH1D3Q9NQM4 214 aaKnown RBP20.45■□□□□ 0.86
SLC6A4-202ENST00000394821 UBE4AQ14139 1066 aa20.44■□□□□ 0.86
SLC6A4-202ENST00000394821 UPF3BQ9BZI7 483 aaKnown RBP20.44■□□□□ 0.86
SLC6A4-202ENST00000394821 SRGNP10124 158 aa20.44■□□□□ 0.86
SLC6A4-202ENST00000394821 HOXA10P31260 410 aaPredicted RBP20.44■□□□□ 0.86
SLC6A4-202ENST00000394821 RASEFQ8IZ41 740 aa20.44■□□□□ 0.86
SLC6A4-202ENST00000394821 RUFY2Q8WXA3 655 aa20.44■□□□□ 0.86
SLC6A4-202ENST00000394821 ZNF512BQ96KM6 892 aaPredicted RBP20.44■□□□□ 0.86
SLC6A4-202ENST00000394821 FAM84BQ96KN1 310 aaPredicted RBP20.44■□□□□ 0.86
SLC6A4-202ENST00000394821 ZGPATQ8N5A5 531 aaKnown RBP20.43■□□□□ 0.86
SLC6A4-202ENST00000394821 SNX14Q9Y5W7 946 aa20.43■□□□□ 0.86
SLC6A4-202ENST00000394821 GPSM2P81274 684 aa20.42■□□□□ 0.86
SLC6A4-202ENST00000394821 KIAA1211Q6ZU35 1233 aa20.42■□□□□ 0.86
SLC6A4-202ENST00000394821 SPATA5Q8NB90 893 aa20.42■□□□□ 0.86
SLC6A4-202ENST00000394821 TMX3Q96JJ7 454 aa20.42■□□□□ 0.86
SLC6A4-202ENST00000394821 ANKIB1Q9P2G1 1089 aa20.42■□□□□ 0.86
SLC6A4-202ENST00000394821 ZNF804BA4D1E1 1349 aa20.42■□□□□ 0.86
SLC6A4-202ENST00000394821 KCNJ4P48050 445 aa20.42■□□□□ 0.86
SLC6A4-202ENST00000394821 COL1A1P02452 1464 aaPredicted RBP20.42■□□□□ 0.86
SLC6A4-202ENST00000394821 HIP1O00291 1037 aa20.41■□□□□ 0.86
SLC6A4-202ENST00000394821 UQCRFS1P1P0C7P4 283 aa20.41■□□□□ 0.86
SLC6A4-202ENST00000394821 ANKRD2Q9GZV1 360 aa20.41■□□□□ 0.86
SLC6A4-202ENST00000394821 MED23Q9ULK4 1368 aa20.41■□□□□ 0.86
SLC6A4-202ENST00000394821 CACNA1SQ13698 1873 aa20.41■□□□□ 0.86
SLC6A4-202ENST00000394821 IRS2Q9Y4H2 1338 aa20.41■□□□□ 0.86
SLC6A4-202ENST00000394821 CHRNA5P30532 468 aa20.4■□□□□ 0.86
SLC6A4-202ENST00000394821 CRAMP1Q96RY5 1269 aa20.4■□□□□ 0.86
SLC6A4-202ENST00000394821 NSFL1CQ9UNZ2 370 aaKnown RBP20.4■□□□□ 0.86
SLC6A4-202ENST00000394821 M0R2C6 588 aa20.39■□□□□ 0.86
SLC6A4-202ENST00000394821 RNF113AO15541 343 aaKnown RBP20.39■□□□□ 0.86
SLC6A4-202ENST00000394821 CCDC125Q86Z20 511 aa20.39■□□□□ 0.86
SLC6A4-202ENST00000394821 OSBP2Q969R2 916 aa20.39■□□□□ 0.86
SLC6A4-202ENST00000394821 MCM2P49736 904 aa20.39■□□□□ 0.85
SLC6A4-202ENST00000394821 PKP1Q13835 747 aa20.39■□□□□ 0.85
SLC6A4-202ENST00000394821 ZMYM1Q5SVZ6 1142 aa20.39■□□□□ 0.85
SLC6A4-202ENST00000394821 WWC3Q9ULE0 1092 aa20.39■□□□□ 0.85
SLC6A4-202ENST00000394821 CCDC171Q6TFL3 1326 aa20.39■□□□□ 0.85
SLC6A4-202ENST00000394821 MYH7P12883 1935 aa20.38■□□□□ 0.85
SLC6A4-202ENST00000394821 IDH1O75874 414 aaKnown RBP20.38■□□□□ 0.85
SLC6A4-202ENST00000394821 PDE6BP35913 854 aa20.38■□□□□ 0.85
SLC6A4-202ENST00000394821 VPS53Q5VIR6 699 aa20.38■□□□□ 0.85
SLC6A4-202ENST00000394821 FBXO33Q7Z6M2 555 aa20.38■□□□□ 0.85
SLC6A4-202ENST00000394821 JAG2Q9Y219 1238 aa20.38■□□□□ 0.85
SLC6A4-202ENST00000394821 RFX7Q2KHR2 1363 aa20.38■□□□□ 0.85
SLC6A4-202ENST00000394821 PPEF1O14829 653 aaPredicted RBP20.38■□□□□ 0.85
SLC6A4-202ENST00000394821 BBOX1O75936 387 aa20.38■□□□□ 0.85
SLC6A4-202ENST00000394821 ZBTB7AO95365 584 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms