RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 LDHAL6AQ6ZMR3 332 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 USP48Q86UV5 1035 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 ANKLE2Q86XL3 938 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 C10orf67Q8IYJ2 551 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 CCDC170Q8IYT3 715 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 ATP6V0A2Q9Y487 856 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 E7EVH7 732 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 ZSCAN22P10073 491 aaPredicted RBP6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 ARID4AP29374 1257 aaPredicted RBP6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 SP4Q02446 784 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 GABPAQ06546 454 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 NOLC1Q14978 699 aaKnown RBP eCLIP6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 DCAF17Q5H9S7 520 aaPredicted RBP6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 SSH1Q8WYL5 1049 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 CDC5LQ99459 802 aaKnown RBP6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 DNAJC25Q9H1X3 360 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 HGSO14964 777 aaPredicted RBP6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 CYP7A1P22680 504 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 MCM7P33993 719 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 RFC4P35249 363 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 STX17P56962 302 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 LACTBP83111 547 aaPredicted RBP6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 Q6ZUG5 572 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 ZSCAN16Q9H4T2 348 aaPredicted RBP6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 FAM114A2Q9NRY5 505 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 NCOA2Q15596 1464 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 POLA1P09884 1462 aaPredicted RBP6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 ZBTB43O43298 467 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 LDHCP07864 332 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 IRX3P78415 501 aaPredicted RBP6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 RAPGEF1Q13905 1077 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 CCDC186Q7Z3E2 898 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 GBP7Q8N8V2 638 aaPredicted RBP6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 KIAA1524Q8TCG1 905 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 IQSEC3Q9UPP2 1182 aaPredicted RBP6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 NAIPQ13075 1403 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 SBNO2Q9Y2G9 1366 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 NKTRP30414 1462 aaKnown RBP6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 PPP2R5DQ14738 602 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 KCNH5Q8NCM2 988 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 RNF34Q969K3 372 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 KIFC2Q96AC6 838 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 RTL1A6NKG5 1358 aa6.42□□□□□ -1.38
GAPVD1-206ENST00000394104 HPDP32754 393 aaPredicted RBP6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 KRT83P78385 493 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 SEL1L2Q5TEA6 688 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 KRBA2Q6ZNG9 492 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 KRT23Q9C075 422 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 EBAG9O00559 213 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 GBP1P32455 592 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 ALDH1L2Q3SY69 923 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 GBP6Q6ZN66 633 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 RSPH3Q86UC2 560 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 CLSTN2Q9H4D0 955 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 TACC3Q9Y6A5 838 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 GRIN2BQ13224 1484 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 LRRC9Q6ZRR7 1453 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 PSMA7O14818 248 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 CASQ2O14958 399 aaPredicted RBP6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 IGSF3O75054 1194 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 NBPF7P0C2Y1 421 aaPredicted RBP6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 CUL4BQ13620 913 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 CCDC117Q8IWD4 279 aaPredicted RBP6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 KRT2P35908 639 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 ZNF131P52739 623 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 RARSP54136 660 aaKnown RBP6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 RNASE9P60153 205 aaKnown RBP6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 SF3A3Q12874 501 aaKnown RBP eCLIP6.41□□□□□ -1.381e-7■■■■□ 19.8
GAPVD1-206ENST00000394104 FAM76AQ8TAV0 307 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 DDX27Q96GQ7 796 aaKnown RBP6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 PKD2L1Q9P0L9 805 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 MTRF1LQ9UGC7 380 aaKnown RBP6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 WWC3Q9ULE0 1092 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 BUB1BO60566 1050 aaPredicted RBP6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 HARSP12081 509 aaKnown RBP6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 RFC1P35251 1148 aaPredicted RBP6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 PCK1P35558 622 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 WAPLQ7Z5K2 1190 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 FMNL3Q8IVF7 1028 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 PPFIBP2Q8ND30 876 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 CCDC110Q8TBZ0 833 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 PRPF31Q8WWY3 499 aaKnown RBP6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 TSGA10Q9BZW7 698 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 CTNND2Q9UQB3 1225 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 FGD5Q6ZNL6 1462 aa6.41□□□□□ -1.38
GAPVD1-206ENST00000394104 KRT86O43790 486 aa6.4□□□□□ -1.38
GAPVD1-206ENST00000394104 SYT10Q6XYQ8 523 aa6.4□□□□□ -1.38
GAPVD1-206ENST00000394104 PPP1R42Q7Z4L9 355 aa6.4□□□□□ -1.38
GAPVD1-206ENST00000394104 RABEP2Q9H5N1 569 aa6.4□□□□□ -1.38
GAPVD1-206ENST00000394104 ECHDC1Q9NTX5 307 aa6.4□□□□□ -1.38
GAPVD1-206ENST00000394104 CPSF2Q9P2I0 782 aaKnown RBP6.4□□□□□ -1.38
GAPVD1-206ENST00000394104 ITIH3Q06033 890 aa6.4□□□□□ -1.38
GAPVD1-206ENST00000394104 NEDD9Q14511 834 aa6.4□□□□□ -1.38
GAPVD1-206ENST00000394104 RBM26Q5T8P6 1007 aaKnown RBP6.4□□□□□ -1.38
GAPVD1-206ENST00000394104 CHST3Q7LGC8 479 aa6.4□□□□□ -1.38
GAPVD1-206ENST00000394104 MSANTD4Q8NCY6 345 aa6.4□□□□□ -1.38
GAPVD1-206ENST00000394104 FYB2Q5VWT5 728 aa6.4□□□□□ -1.38
GAPVD1-206ENST00000394104 KCNG4Q8TDN1 519 aa6.4□□□□□ -1.38
GAPVD1-206ENST00000394104 ARHGEF2Q92974 986 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms