RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 MAST3O60307 1309 aa16.37■□□□□ 0.21
GAPVD1-205ENST00000394084 ZMYM1Q5SVZ6 1142 aa16.37■□□□□ 0.21
GAPVD1-205ENST00000394084 CWC25Q9NXE8 425 aaPredicted RBP16.37■□□□□ 0.21
GAPVD1-205ENST00000394084 EXOSC10Q01780 885 aaKnown RBP16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 FKBP4Q02790 459 aaKnown RBP eCLIP16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 CACTINQ8WUQ7 758 aaKnown RBP16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 PKNOX2Q96KN3 472 aa16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 CCDC85AQ96PX6 553 aaPredicted RBP16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 CCDC94Q9BW85 323 aaPredicted RBP16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 ARFGEF2Q9Y6D5 1785 aa16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 ME1P48163 572 aa16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 HAND2P61296 217 aa16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 OTUD7BQ6GQQ9 843 aa16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 NAA16Q6N069 864 aaPredicted RBP16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 CCDC73Q6ZRK6 1079 aa16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 DSCC1Q9BVC3 393 aa16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 RCOR1Q9UKL0 485 aa16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 ZNF330Q9Y3S2 320 aaPredicted RBP16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 LMTK3Q96Q04 1460 aa16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 A0A1B0GUL7 405 aa16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 M0R2C6 588 aa16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 HSP90AB3PQ58FF7 597 aa16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 RAB11FIP4Q86YS3 637 aa16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 BCL11BQ9C0K0 894 aaPredicted RBP16.36■□□□□ 0.21
GAPVD1-205ENST00000394084 PALLDQ8WX93 1383 aa16.35■□□□□ 0.21
GAPVD1-205ENST00000394084 ADAMTSL3P82987 1691 aa16.35■□□□□ 0.21
GAPVD1-205ENST00000394084 PDIA3P30101 505 aaKnown RBP16.35■□□□□ 0.21
GAPVD1-205ENST00000394084 ARID5BQ14865 1188 aa16.35■□□□□ 0.21
GAPVD1-205ENST00000394084 RNF113AO15541 343 aaKnown RBP16.35■□□□□ 0.21
GAPVD1-205ENST00000394084 IL15P40933 162 aaPredicted RBP16.35■□□□□ 0.21
GAPVD1-205ENST00000394084 IQCB1Q15051 598 aa16.35■□□□□ 0.21
GAPVD1-205ENST00000394084 FSIP1Q8NA03 581 aa16.35■□□□□ 0.21
GAPVD1-205ENST00000394084 TAOK2Q9UL54 1235 aa16.35■□□□□ 0.21
GAPVD1-205ENST00000394084 EYA2O00167 538 aa16.34■□□□□ 0.21
GAPVD1-205ENST00000394084 KINO60870 393 aaKnown RBP16.34■□□□□ 0.21
GAPVD1-205ENST00000394084 ATF3P18847 181 aa16.34■□□□□ 0.21
GAPVD1-205ENST00000394084 PPP4R3BQ5MIZ7 849 aa16.34■□□□□ 0.21
GAPVD1-205ENST00000394084 LAMA4Q16363 1823 aa16.34■□□□□ 0.21
GAPVD1-205ENST00000394084 BECN2A8MW95 431 aa16.34■□□□□ 0.21
GAPVD1-205ENST00000394084 SNW1Q13573 536 aaKnown RBP16.34■□□□□ 0.21
GAPVD1-205ENST00000394084 STX1AQ16623 288 aa16.34■□□□□ 0.21
GAPVD1-205ENST00000394084 WASHC4Q2M389 1173 aa16.34■□□□□ 0.21
GAPVD1-205ENST00000394084 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.34■□□□□ 0.21
GAPVD1-205ENST00000394084 ILDR1Q86SU0 546 aaPredicted RBP16.34■□□□□ 0.21
GAPVD1-205ENST00000394084 OSBP2Q969R2 916 aa16.33■□□□□ 0.21
GAPVD1-205ENST00000394084 ZNF396Q96N95 335 aaPredicted RBP16.33■□□□□ 0.21
GAPVD1-205ENST00000394084 TNNT1P13805 278 aa16.33■□□□□ 0.2
GAPVD1-205ENST00000394084 GORABQ5T7V8 394 aa16.33■□□□□ 0.2
GAPVD1-205ENST00000394084 ADORA1P30542 326 aa16.32■□□□□ 0.2
GAPVD1-205ENST00000394084 CBX1P83916 185 aa16.32■□□□□ 0.2
GAPVD1-205ENST00000394084 TPD52L1Q16890 204 aaPredicted RBP16.32■□□□□ 0.2
GAPVD1-205ENST00000394084 FILIP1Q7Z7B0 1213 aa16.32■□□□□ 0.2
GAPVD1-205ENST00000394084 CARMIL3Q8ND23 1372 aa16.32■□□□□ 0.2
GAPVD1-205ENST00000394084 ZNF142P52746 1687 aaPredicted RBP16.32■□□□□ 0.2
GAPVD1-205ENST00000394084 POLR3DP05423 398 aaPredicted RBP16.32■□□□□ 0.2
GAPVD1-205ENST00000394084 FDPSP14324 419 aaKnown RBP16.32■□□□□ 0.2
GAPVD1-205ENST00000394084 ZNF592Q92610 1267 aa16.32■□□□□ 0.2
GAPVD1-205ENST00000394084 AGXT2Q9BYV1 514 aa16.32■□□□□ 0.2
GAPVD1-205ENST00000394084 A0A1B0GVL5 298 aa16.31■□□□□ 0.2
GAPVD1-205ENST00000394084 FAM160A1Q05DH4 1040 aa16.31■□□□□ 0.2
GAPVD1-205ENST00000394084 PDCL2Q8N4E4 241 aa16.31■□□□□ 0.2
GAPVD1-205ENST00000394084 GJB4Q9NTQ9 266 aa16.31■□□□□ 0.2
GAPVD1-205ENST00000394084 CTAGE5O15320 804 aa16.31■□□□□ 0.2
GAPVD1-205ENST00000394084 GPR108Q9NPR9 543 aa16.31■□□□□ 0.2
GAPVD1-205ENST00000394084 CEP126Q9P2H0 1117 aa16.31■□□□□ 0.2
GAPVD1-205ENST00000394084 PCDHA7Q9UN72 937 aa16.31■□□□□ 0.2
GAPVD1-205ENST00000394084 SALL1Q9NSC2 1324 aa16.31■□□□□ 0.2
GAPVD1-205ENST00000394084 ALS2Q96Q42 1657 aa16.3■□□□□ 0.2
GAPVD1-205ENST00000394084 TTC39AQ5SRH9 613 aa16.3■□□□□ 0.2
GAPVD1-205ENST00000394084 ENGASEQ8NFI3 743 aa16.3■□□□□ 0.2
GAPVD1-205ENST00000394084 ZNF274Q96GC6 653 aaPredicted RBP16.3■□□□□ 0.2
GAPVD1-205ENST00000394084 CAVIN2O95810 425 aa16.3■□□□□ 0.2
GAPVD1-205ENST00000394084 ATP2B3Q16720 1220 aa16.3■□□□□ 0.2
GAPVD1-205ENST00000394084 AOPEPQ8N6M6 819 aa16.3■□□□□ 0.2
GAPVD1-205ENST00000394084 SDF4Q9BRK5 362 aa16.3■□□□□ 0.2
GAPVD1-205ENST00000394084 SPDYE4A6NLX3 237 aa16.3■□□□□ 0.2
GAPVD1-205ENST00000394084 SF3A1Q15459 793 aaKnown RBP16.3■□□□□ 0.2
GAPVD1-205ENST00000394084 DHX40Q8IX18 779 aaKnown RBP16.3■□□□□ 0.2
GAPVD1-205ENST00000394084 SCARF1Q14162 830 aa16.29■□□□□ 0.2
GAPVD1-205ENST00000394084 PI16Q6UXB8 463 aa16.29■□□□□ 0.2
GAPVD1-205ENST00000394084 LRRC8AQ8IWT6 810 aa16.29■□□□□ 0.2
GAPVD1-205ENST00000394084 ANO10Q9NW15 660 aa16.29■□□□□ 0.2
GAPVD1-205ENST00000394084 KIF1AQ12756 1690 aa16.29■□□□□ 0.2
GAPVD1-205ENST00000394084 USP27XA6NNY8 438 aa16.29■□□□□ 0.2
GAPVD1-205ENST00000394084 CLIC4Q9Y696 253 aa16.29■□□□□ 0.2
GAPVD1-205ENST00000394084 KLF18A0A0U1RQI7 1052 aa16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 NAA30Q147X3 362 aaPredicted RBP16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 STK38Q15208 465 aa16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 CCDC57Q2TAC2 916 aa16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 CCDC158Q5M9N0 1113 aa16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 CCDC191Q8NCU4 936 aa16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 MRPS27Q92552 414 aaKnown RBP16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 XAGE2Q96GT9 111 aa16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 PRC1O43663 620 aa16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 CDC25BP30305 580 aa16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 SARM1Q6SZW1 724 aa16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 TOM1L2Q6ZVM7 507 aa16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 C8orf76Q96K31 380 aa16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 GOLGA8BA8MQT2 603 aa16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 CTIFO43310 598 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms