RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 SYT1P21579 422 aa17.09■□□□□ 0.33
RNF41-202ENST00000394013 RNF20Q5VTR2 975 aa17.09■□□□□ 0.33
RNF41-202ENST00000394013 CCDC102BQ68D86 513 aa17.09■□□□□ 0.33
RNF41-202ENST00000394013 TBC1D9BQ66K14 1250 aa17.08■□□□□ 0.33
RNF41-202ENST00000394013 SMARCC1Q92922 1105 aaPredicted RBP17.08■□□□□ 0.33
RNF41-202ENST00000394013 SMC3Q9UQE7 1217 aa17.08■□□□□ 0.33
RNF41-202ENST00000394013 RREB1Q92766 1687 aa17.08■□□□□ 0.32
RNF41-202ENST00000394013 MEX3CQ5U5Q3 659 aaKnown RBP17.08■□□□□ 0.32
RNF41-202ENST00000394013 IQSEC3Q9UPP2 1182 aaPredicted RBP17.08■□□□□ 0.32
RNF41-202ENST00000394013 CAVIN1Q6NZI2 390 aaKnown RBP17.07■□□□□ 0.32
RNF41-202ENST00000394013 NKX2-3Q8TAU0 364 aa17.07■□□□□ 0.32
RNF41-202ENST00000394013 NEK1Q96PY6 1258 aa17.07■□□□□ 0.32
RNF41-202ENST00000394013 GPHNQ9NQX3 736 aaPredicted RBP17.07■□□□□ 0.32
RNF41-202ENST00000394013 HELLSQ9NRZ9 838 aa17.07■□□□□ 0.32
RNF41-202ENST00000394013 FBXO3Q9UK99 471 aa17.07■□□□□ 0.32
RNF41-202ENST00000394013 RFX7Q2KHR2 1363 aa17.07■□□□□ 0.32
RNF41-202ENST00000394013 XRCC6P12956 609 aaKnown RBP eCLIP17.07■□□□□ 0.32
RNF41-202ENST00000394013 Q6ZUG5 572 aa17.07■□□□□ 0.32
RNF41-202ENST00000394013 DENND2AQ9ULE3 1009 aa17.07■□□□□ 0.32
RNF41-202ENST00000394013 U3KPZ7 1027 aaPredicted RBP17.07■□□□□ 0.32
RNF41-202ENST00000394013 LAMA4Q16363 1823 aa17.07■□□□□ 0.32
RNF41-202ENST00000394013 BTAF1O14981 1849 aa17.06■□□□□ 0.32
RNF41-202ENST00000394013 FSD2A1L4K1 749 aa17.06■□□□□ 0.32
RNF41-202ENST00000394013 GOLGA6L22H0YM25 854 aa17.06■□□□□ 0.32
RNF41-202ENST00000394013 GNPATO15228 680 aa17.06■□□□□ 0.32
RNF41-202ENST00000394013 GADD45BO75293 160 aaPredicted RBP17.06■□□□□ 0.32
RNF41-202ENST00000394013 IDH1O75874 414 aaKnown RBP17.06■□□□□ 0.32
RNF41-202ENST00000394013 PSMA5P28066 241 aa17.06■□□□□ 0.32
RNF41-202ENST00000394013 MPHOSPH8Q99549 860 aa17.06■□□□□ 0.32
RNF41-202ENST00000394013 WWC3Q9ULE0 1092 aa17.06■□□□□ 0.32
RNF41-202ENST00000394013 PHF14O94880 888 aa17.06■□□□□ 0.32
RNF41-202ENST00000394013 FGFR2P21802 821 aa17.06■□□□□ 0.32
RNF41-202ENST00000394013 AFF2P51816 1311 aa17.05■□□□□ 0.32
RNF41-202ENST00000394013 JAK2O60674 1132 aa17.05■□□□□ 0.32
RNF41-202ENST00000394013 BCAMP50895 628 aa17.05■□□□□ 0.32
RNF41-202ENST00000394013 HMG20BQ9P0W2 317 aa17.05■□□□□ 0.32
RNF41-202ENST00000394013 GOLGA6L3A6NEY3 463 aa17.05■□□□□ 0.32
RNF41-202ENST00000394013 TSGA10IPQ3SY00 556 aa17.05■□□□□ 0.32
RNF41-202ENST00000394013 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.05■□□□□ 0.32
RNF41-202ENST00000394013 CNPY2Q9Y2B0 182 aa17.05■□□□□ 0.32
RNF41-202ENST00000394013 ABCC12Q96J65 1359 aa17.04■□□□□ 0.32
RNF41-202ENST00000394013 STX6O43752 255 aa17.04■□□□□ 0.32
RNF41-202ENST00000394013 FAM173BQ6P4H8 233 aa17.04■□□□□ 0.32
RNF41-202ENST00000394013 BRF1Q92994 677 aa17.04■□□□□ 0.32
RNF41-202ENST00000394013 CCNL1Q9UK58 526 aaPredicted RBP17.04■□□□□ 0.32
RNF41-202ENST00000394013 E7EWF7 191 aa17.04■□□□□ 0.32
RNF41-202ENST00000394013 RASGRF1Q13972 1273 aa17.04■□□□□ 0.32
RNF41-202ENST00000394013 PUM3Q15397 648 aaKnown RBP17.04■□□□□ 0.32
RNF41-202ENST00000394013 KLHL40Q2TBA0 621 aa17.04■□□□□ 0.32
RNF41-202ENST00000394013 PARP10Q53GL7 1025 aa17.04■□□□□ 0.32
RNF41-202ENST00000394013 SLC9C2Q5TAH2 1124 aa17.04■□□□□ 0.32
RNF41-202ENST00000394013 FERMT3Q86UX7 667 aa17.04■□□□□ 0.32
RNF41-202ENST00000394013 GJD4Q96KN9 370 aaPredicted RBP17.04■□□□□ 0.32
RNF41-202ENST00000394013 RTN4Q9NQC3 1192 aaKnown RBP17.04■□□□□ 0.32
RNF41-202ENST00000394013 VPS37CA5D8V6 355 aaPredicted RBP17.03■□□□□ 0.32
RNF41-202ENST00000394013 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.03■□□□□ 0.32
RNF41-202ENST00000394013 LRP5O75197 1615 aa17.03■□□□□ 0.32
RNF41-202ENST00000394013 GPAA1O43292 621 aa17.03■□□□□ 0.32
RNF41-202ENST00000394013 ZSCAN22P10073 491 aaPredicted RBP17.03■□□□□ 0.32
RNF41-202ENST00000394013 FOSBP53539 338 aa17.03■□□□□ 0.32
RNF41-202ENST00000394013 CHRNDQ07001 517 aa17.03■□□□□ 0.32
RNF41-202ENST00000394013 CCDC152Q4G0S7 254 aa17.03■□□□□ 0.32
RNF41-202ENST00000394013 DSCC1Q9BVC3 393 aa17.03■□□□□ 0.32
RNF41-202ENST00000394013 MTMR6Q9Y217 621 aa17.03■□□□□ 0.32
RNF41-202ENST00000394013 FGAP02671 866 aa17.02■□□□□ 0.32
RNF41-202ENST00000394013 APOBRQ0VD83 1088 aa17.02■□□□□ 0.32
RNF41-202ENST00000394013 RAB11FIP4Q86YS3 637 aa17.02■□□□□ 0.32
RNF41-202ENST00000394013 CERKQ8TCT0 537 aa17.02■□□□□ 0.32
RNF41-202ENST00000394013 LPIN2Q92539 896 aa17.02■□□□□ 0.32
RNF41-202ENST00000394013 CELF1Q92879 486 aaKnown RBP17.02■□□□□ 0.32
RNF41-202ENST00000394013 BCORQ6W2J9 1755 aa17.02■□□□□ 0.31
RNF41-202ENST00000394013 WDR33Q9C0J8 1336 aaKnown RBP17.02■□□□□ 0.31
RNF41-202ENST00000394013 HSP90B1P14625 803 aaKnown RBP17.02■□□□□ 0.31
RNF41-202ENST00000394013 DDX11Q96FC9 970 aa17.02■□□□□ 0.31
RNF41-202ENST00000394013 ZSCAN31Q96LW9 406 aaPredicted RBP17.02■□□□□ 0.31
RNF41-202ENST00000394013 INCENPQ9NQS7 918 aa17.02■□□□□ 0.31
RNF41-202ENST00000394013 SH2B1Q9NRF2 756 aaPredicted RBP17.02■□□□□ 0.31
RNF41-202ENST00000394013 TMEM63CQ9P1W3 806 aa17.02■□□□□ 0.31
RNF41-202ENST00000394013 MROH5Q6ZUA9 1318 aa17.01■□□□□ 0.31
RNF41-202ENST00000394013 ZNF532Q9HCE3 1301 aa17.01■□□□□ 0.31
RNF41-202ENST00000394013 MYH7P12883 1935 aa17.01■□□□□ 0.31
RNF41-202ENST00000394013 SKOR2Q2VWA4 1001 aaPredicted RBP17.01■□□□□ 0.31
RNF41-202ENST00000394013 CDC37L1Q7L3B6 337 aa17.01■□□□□ 0.31
RNF41-202ENST00000394013 USP48Q86UV5 1035 aa17.01■□□□□ 0.31
RNF41-202ENST00000394013 APPBP2Q92624 585 aa17.01■□□□□ 0.31
RNF41-202ENST00000394013 THSD7AQ9UPZ6 1657 aa17.01■□□□□ 0.31
RNF41-202ENST00000394013 ADD2P35612 726 aa17.01■□□□□ 0.31
RNF41-202ENST00000394013 CCT2P78371 535 aaKnown RBP17.01■□□□□ 0.31
RNF41-202ENST00000394013 SEPT12Q8IYM1 358 aa17.01■□□□□ 0.31
RNF41-202ENST00000394013 NCOA5Q9HCD5 579 aaKnown RBP17.01■□□□□ 0.31
RNF41-202ENST00000394013 LRRC4BQ9NT99 713 aa17.01■□□□□ 0.31
RNF41-202ENST00000394013 NAP1L2Q9ULW6 460 aaPredicted RBP17.01■□□□□ 0.31
RNF41-202ENST00000394013 SPATA31A6Q5VVP1 1343 aa17■□□□□ 0.31
RNF41-202ENST00000394013 F13A1P00488 732 aa17■□□□□ 0.31
RNF41-202ENST00000394013 KLRK1P26718 216 aa17■□□□□ 0.31
RNF41-202ENST00000394013 GTF2E1P29083 439 aaPredicted RBP17■□□□□ 0.31
RNF41-202ENST00000394013 ARID4AP29374 1257 aaPredicted RBP17■□□□□ 0.31
RNF41-202ENST00000394013 IGHMBP2P38935 993 aaKnown RBP17■□□□□ 0.31
RNF41-202ENST00000394013 ARHGEF1Q92888 912 aaKnown RBP17■□□□□ 0.31
RNF41-202ENST00000394013 ZNF652Q9Y2D9 606 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms