RNA–Protein interactions for RNA: ENST00000393811.6

R3HDM2-203, Transcript of R3H domain containing 2, humanhuman

TSL 1 (best)

Gene R3HDM2, Length 3,778 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-203ENST00000393811 CCDC85AQ96PX6 553 aaPredicted RBP13.68□□□□□ -0.22
R3HDM2-203ENST00000393811 ZBTB22O15209 634 aa13.68□□□□□ -0.22
R3HDM2-203ENST00000393811 PTPN21Q16825 1174 aa13.68□□□□□ -0.22
R3HDM2-203ENST00000393811 DPCR1Q3MIW9 517 aa13.68□□□□□ -0.22
R3HDM2-203ENST00000393811 NAA16Q6N069 864 aaPredicted RBP13.68□□□□□ -0.22
R3HDM2-203ENST00000393811 PCDHA7Q9UN72 937 aa13.68□□□□□ -0.22
R3HDM2-203ENST00000393811 SETD1BQ9UPS6 1966 aaKnown RBP13.68□□□□□ -0.22
R3HDM2-203ENST00000393811 CBFA2T2O43439 604 aa13.68□□□□□ -0.22
R3HDM2-203ENST00000393811 GNG11P61952 73 aa13.68□□□□□ -0.22
R3HDM2-203ENST00000393811 SLFNL1Q499Z3 407 aa13.68□□□□□ -0.22
R3HDM2-203ENST00000393811 DDX21Q9NR30 783 aaKnown RBP eCLIP13.68□□□□□ -0.22
R3HDM2-203ENST00000393811 DBNLQ9UJU6 430 aaKnown RBP13.68□□□□□ -0.22
R3HDM2-203ENST00000393811 RCOR1Q9UKL0 485 aa13.68□□□□□ -0.22
R3HDM2-203ENST00000393811 MORC2Q9Y6X9 1032 aaPredicted RBP13.68□□□□□ -0.22
R3HDM2-203ENST00000393811 PREX1Q8TCU6 1659 aa13.67□□□□□ -0.22
R3HDM2-203ENST00000393811 KLF18A0A0U1RQI7 1052 aa13.67□□□□□ -0.22
R3HDM2-203ENST00000393811 ANKRD13DQ6ZTN6 518 aa13.67□□□□□ -0.22
R3HDM2-203ENST00000393811 NSUN7Q8NE18 718 aaKnown RBP13.67□□□□□ -0.22
R3HDM2-203ENST00000393811 NDUFA8P51970 172 aa13.67□□□□□ -0.22
R3HDM2-203ENST00000393811 TIMM10P62072 90 aa13.67□□□□□ -0.22
R3HDM2-203ENST00000393811 MTX1Q13505 466 aa13.67□□□□□ -0.22
R3HDM2-203ENST00000393811 LMBR1LQ6UX01 489 aa13.67□□□□□ -0.22
R3HDM2-203ENST00000393811 LLPHQ9BRT6 129 aaKnown RBP13.67□□□□□ -0.22
R3HDM2-203ENST00000393811 CARD6Q9BX69 1037 aa13.67□□□□□ -0.22
R3HDM2-203ENST00000393811 ADCY9O60503 1353 aa13.67□□□□□ -0.22
R3HDM2-203ENST00000393811 KDRP35968 1356 aa13.67□□□□□ -0.22
R3HDM2-203ENST00000393811 USP42Q9H9J4 1324 aaKnown RBP13.67□□□□□ -0.22
R3HDM2-203ENST00000393811 KCNG4Q8TDN1 519 aa13.67□□□□□ -0.22
R3HDM2-203ENST00000393811 IP6K1Q92551 441 aa13.67□□□□□ -0.22
R3HDM2-203ENST00000393811 CCDC34Q96HJ3 373 aa13.67□□□□□ -0.22
R3HDM2-203ENST00000393811 CLTCQ00610 1675 aaKnown RBP13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 LRRFIP1Q32MZ4 808 aaKnown RBP13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 SARM1Q6SZW1 724 aa13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 KIAA1468Q9P260 1216 aa13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.66□□□□□ -0.223e-6■■■□□ 16.5
R3HDM2-203ENST00000393811 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 PFKFB2O60825 505 aa13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 SYKP43405 635 aa13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 FANCCQ00597 558 aa13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 IMMTQ16891 758 aaKnown RBP13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 JMYQ8N9B5 988 aa13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 PPP1R13BQ96KQ4 1090 aa13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 USP31Q70CQ4 1352 aa13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 TMEM2Q9UHN6 1383 aa13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 CEP170BQ9Y4F5 1589 aaPredicted RBP13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 ZSCAN12O43309 604 aa13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 ATP5JP18859 108 aa13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 CASQ1P31415 396 aa13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 ZC3H6P61129 1189 aaKnown RBP13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 DHX8Q14562 1220 aaKnown RBP13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 HSP90AB3PQ58FF7 597 aa13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 ZFP91Q96JP5 570 aaPredicted RBP13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 PAG1Q9NWQ8 432 aa13.66□□□□□ -0.22
R3HDM2-203ENST00000393811 ZNF202O95125 648 aa13.65□□□□□ -0.22
R3HDM2-203ENST00000393811 CCZ1BP86790 482 aa13.65□□□□□ -0.22
R3HDM2-203ENST00000393811 CCZ1P86791 482 aaPredicted RBP13.65□□□□□ -0.22
R3HDM2-203ENST00000393811 GCKRQ14397 625 aa13.65□□□□□ -0.22
R3HDM2-203ENST00000393811 IMPACTQ9P2X3 320 aa13.65□□□□□ -0.22
R3HDM2-203ENST00000393811 SLFN14P0C7P3 912 aa13.65□□□□□ -0.23
R3HDM2-203ENST00000393811 GOLGA8FQ08AF8 430 aa13.65□□□□□ -0.23
R3HDM2-203ENST00000393811 GOLGA8DPQ0D2H9 430 aa13.65□□□□□ -0.23
R3HDM2-203ENST00000393811 TTC39AQ5SRH9 613 aa13.65□□□□□ -0.23
R3HDM2-203ENST00000393811 EVCP57679 992 aa13.64□□□□□ -0.23
R3HDM2-203ENST00000393811 RBM6P78332 1123 aaKnown RBP13.64□□□□□ -0.23
R3HDM2-203ENST00000393811 DHX40Q8IX18 779 aaKnown RBP13.64□□□□□ -0.23
R3HDM2-203ENST00000393811 KCNB2Q92953 911 aa13.64□□□□□ -0.23
R3HDM2-203ENST00000393811 CLIC4Q9Y696 253 aa13.64□□□□□ -0.23
R3HDM2-203ENST00000393811 KCNH5Q8NCM2 988 aa13.64□□□□□ -0.23
R3HDM2-203ENST00000393811 ANKRD24Q8TF21 1146 aa13.64□□□□□ -0.23
R3HDM2-203ENST00000393811 HOOK1Q9UJC3 728 aaKnown RBP13.64□□□□□ -0.23
R3HDM2-203ENST00000393811 E7EWF7 191 aa13.63□□□□□ -0.23
R3HDM2-203ENST00000393811 CLCN6P51797 869 aa13.63□□□□□ -0.23
R3HDM2-203ENST00000393811 EPHA10Q5JZY3 1008 aa13.63□□□□□ -0.23
R3HDM2-203ENST00000393811 ADALQ6DHV7 355 aa13.63□□□□□ -0.23
R3HDM2-203ENST00000393811 KBTBD3Q8NAB2 608 aa13.63□□□□□ -0.23
R3HDM2-203ENST00000393811 CNNM3Q8NE01 707 aa13.63□□□□□ -0.23
R3HDM2-203ENST00000393811 NEURL1BA8MQ27 555 aa13.63□□□□□ -0.23
R3HDM2-203ENST00000393811 KCNA6P17658 529 aa13.63□□□□□ -0.23
R3HDM2-203ENST00000393811 ETF1P62495 437 aaKnown RBP13.63□□□□□ -0.23
R3HDM2-203ENST00000393811 CCDC158Q5M9N0 1113 aa13.63□□□□□ -0.23
R3HDM2-203ENST00000393811 ATL3Q6DD88 541 aa13.63□□□□□ -0.23
R3HDM2-203ENST00000393811 CPLX3Q8WVH0 158 aa13.63□□□□□ -0.23
R3HDM2-203ENST00000393811 CEP126Q9P2H0 1117 aa13.63□□□□□ -0.23
R3HDM2-203ENST00000393811 RXRAP19793 462 aa13.63□□□□□ -0.23
R3HDM2-203ENST00000393811 RBM43Q6ZSC3 357 aaKnown RBP13.63□□□□□ -0.23
R3HDM2-203ENST00000393811 NRKQ7Z2Y5 1582 aa13.63□□□□□ -0.23
R3HDM2-203ENST00000393811 DIP2BQ9P265 1576 aa13.63□□□□□ -0.23
R3HDM2-203ENST00000393811 SKIDA1Q1XH10 827 aa13.62□□□□□ -0.23
R3HDM2-203ENST00000393811 NFATC2IPQ8NCF5 419 aa13.62□□□□□ -0.23
R3HDM2-203ENST00000393811 GPHNQ9NQX3 736 aaPredicted RBP13.62□□□□□ -0.23
R3HDM2-203ENST00000393811 GJB4Q9NTQ9 266 aa13.62□□□□□ -0.23
R3HDM2-203ENST00000393811 PRC1O43663 620 aa13.62□□□□□ -0.23
R3HDM2-203ENST00000393811 SEC31AO94979 1220 aaKnown RBP13.62□□□□□ -0.23
R3HDM2-203ENST00000393811 KARSQ15046 597 aaKnown RBP13.62□□□□□ -0.23
R3HDM2-203ENST00000393811 NYAP1Q6ZVC0 841 aa13.62□□□□□ -0.23
R3HDM2-203ENST00000393811 NEK11Q8NG66 645 aa13.62□□□□□ -0.23
R3HDM2-203ENST00000393811 AK7Q96M32 723 aa13.62□□□□□ -0.23
R3HDM2-203ENST00000393811 PES1O00541 588 aaKnown RBP13.62□□□□□ -0.23
R3HDM2-203ENST00000393811 TPM1P09493 284 aa13.62□□□□□ -0.23
R3HDM2-203ENST00000393811 ATP1A3P13637 1013 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms