RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 HMG20BQ9P0W2 317 aa25.62■■□□□ 1.69
SPHK1-202ENST00000392496 SLC27A2O14975 620 aa25.61■■□□□ 1.69
SPHK1-202ENST00000392496 MCAMP43121 646 aa25.61■■□□□ 1.69
SPHK1-202ENST00000392496 CCDC102BQ68D86 513 aa25.61■■□□□ 1.69
SPHK1-202ENST00000392496 TMX3Q96JJ7 454 aa25.61■■□□□ 1.69
SPHK1-202ENST00000392496 NLRP3Q96P20 1036 aa25.61■■□□□ 1.69
SPHK1-202ENST00000392496 SEC62Q99442 399 aaKnown RBP25.61■■□□□ 1.69
SPHK1-202ENST00000392496 FOXD4L1Q9NU39 408 aa25.61■■□□□ 1.69
SPHK1-202ENST00000392496 CHGBP05060 677 aa25.61■■□□□ 1.69
SPHK1-202ENST00000392496 TTC14Q96N46 770 aa25.61■■□□□ 1.69
SPHK1-202ENST00000392496 CHRNDQ07001 517 aa25.6■■□□□ 1.69
SPHK1-202ENST00000392496 TXNRD1Q16881 649 aa25.6■■□□□ 1.69
SPHK1-202ENST00000392496 CWC22Q9HCG8 908 aaKnown RBP25.6■■□□□ 1.69
SPHK1-202ENST00000392496 U3KPZ7 1027 aaPredicted RBP25.6■■□□□ 1.69
SPHK1-202ENST00000392496 CARMIL3Q8ND23 1372 aa25.6■■□□□ 1.69
SPHK1-202ENST00000392496 MYH7P12883 1935 aa25.6■■□□□ 1.69
SPHK1-202ENST00000392496 COL4A1P02462 1669 aa25.59■■□□□ 1.69
SPHK1-202ENST00000392496 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.59■■□□□ 1.69
SPHK1-202ENST00000392496 FRAT2O75474 233 aaPredicted RBP25.59■■□□□ 1.69
SPHK1-202ENST00000392496 EN1Q05925 392 aaPredicted RBP25.59■■□□□ 1.69
SPHK1-202ENST00000392496 TTF1Q15361 905 aaPredicted RBP25.59■■□□□ 1.69
SPHK1-202ENST00000392496 TSGA10IPQ3SY00 556 aa25.59■■□□□ 1.69
SPHK1-202ENST00000392496 ZSWIM6Q9HCJ5 1215 aa25.59■■□□□ 1.69
SPHK1-202ENST00000392496 BSDC1Q9NW68 430 aaPredicted RBP25.59■■□□□ 1.69
SPHK1-202ENST00000392496 A0A1B0GUL6 1792 aa25.59■■□□□ 1.69
SPHK1-202ENST00000392496 PHKA1P46020 1223 aa25.59■■□□□ 1.69
SPHK1-202ENST00000392496 CUL4AQ13619 759 aa25.59■■□□□ 1.69
SPHK1-202ENST00000392496 CCDC129Q6ZRS4 1044 aa25.59■■□□□ 1.69
SPHK1-202ENST00000392496 JAKMIP1Q96N16 626 aaKnown RBP25.59■■□□□ 1.69
SPHK1-202ENST00000392496 RGPD3A6NKT7 1758 aaPredicted RBP25.58■■□□□ 1.69
SPHK1-202ENST00000392496 RGPD4Q7Z3J3 1758 aa25.58■■□□□ 1.69
SPHK1-202ENST00000392496 CASTP20810 708 aaKnown RBP25.58■■□□□ 1.69
SPHK1-202ENST00000392496 PSMA5P28066 241 aa25.58■■□□□ 1.69
SPHK1-202ENST00000392496 DSCC1Q9BVC3 393 aa25.57■■□□□ 1.68
SPHK1-202ENST00000392496 RPAP1Q9BWH6 1393 aaPredicted RBP25.57■■□□□ 1.68
SPHK1-202ENST00000392496 NFIXQ14938 502 aa25.56■■□□□ 1.68
SPHK1-202ENST00000392496 ADCK5Q3MIX3 580 aa25.56■■□□□ 1.68
SPHK1-202ENST00000392496 ZSCAN25Q6NSZ9 544 aa25.56■■□□□ 1.68
SPHK1-202ENST00000392496 PI16Q6UXB8 463 aa25.56■■□□□ 1.68
SPHK1-202ENST00000392496 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.56■■□□□ 1.68
SPHK1-202ENST00000392496 CYP46A1Q9Y6A2 500 aa25.56■■□□□ 1.68
SPHK1-202ENST00000392496 MAST3O60307 1309 aa25.56■■□□□ 1.68
SPHK1-202ENST00000392496 RAB3GAP1Q15042 981 aa25.56■■□□□ 1.68
SPHK1-202ENST00000392496 VPS53Q5VIR6 699 aa25.56■■□□□ 1.68
SPHK1-202ENST00000392496 CAMKK2Q96RR4 588 aa25.56■■□□□ 1.68
SPHK1-202ENST00000392496 CYP2E1P05181 493 aaPredicted RBP25.55■■□□□ 1.68
SPHK1-202ENST00000392496 RUFY3Q7L099 469 aa25.55■■□□□ 1.68
SPHK1-202ENST00000392496 DEFB132Q7Z7B7 95 aa25.55■■□□□ 1.68
SPHK1-202ENST00000392496 INTS4Q96HW7 963 aaKnown RBP25.55■■□□□ 1.68
SPHK1-202ENST00000392496 TAF1P21675 1872 aa25.55■■□□□ 1.68
SPHK1-202ENST00000392496 KRT32Q14532 448 aa25.54■■□□□ 1.68
SPHK1-202ENST00000392496 EZH2Q15910 746 aaKnown RBP25.54■■□□□ 1.68
SPHK1-202ENST00000392496 SLFNL1Q499Z3 407 aa25.54■■□□□ 1.68
SPHK1-202ENST00000392496 APPBP2Q92624 585 aa25.54■■□□□ 1.68
SPHK1-202ENST00000392496 AK2P54819 239 aa25.54■■□□□ 1.68
SPHK1-202ENST00000392496 UBE4AQ14139 1066 aa25.54■■□□□ 1.68
SPHK1-202ENST00000392496 PROM2Q8N271 834 aa25.54■■□□□ 1.68
SPHK1-202ENST00000392496 CELF1Q92879 486 aaKnown RBP25.54■■□□□ 1.68
SPHK1-202ENST00000392496 OSBP2Q969R2 916 aa25.54■■□□□ 1.68
SPHK1-202ENST00000392496 SNAP23O00161 211 aa25.53■■□□□ 1.68
SPHK1-202ENST00000392496 GYS1P13807 737 aa25.53■■□□□ 1.68
SPHK1-202ENST00000392496 RPS8P62241 208 aaKnown RBP25.53■■□□□ 1.68
SPHK1-202ENST00000392496 PDRG1Q9NUG6 133 aa25.53■■□□□ 1.68
SPHK1-202ENST00000392496 MINPP1Q9UNW1 487 aa25.53■■□□□ 1.68
SPHK1-202ENST00000392496 M0R2C6 588 aa25.52■■□□□ 1.68
SPHK1-202ENST00000392496 NPHP1O15259 732 aa25.51■■□□□ 1.67
SPHK1-202ENST00000392496 NUCB2P80303 420 aa25.51■■□□□ 1.67
SPHK1-202ENST00000392496 WASHC4Q2M389 1173 aa25.51■■□□□ 1.67
SPHK1-202ENST00000392496 ZGPATQ8N5A5 531 aaKnown RBP25.51■■□□□ 1.67
SPHK1-202ENST00000392496 SPATA5Q8NB90 893 aa25.51■■□□□ 1.67
SPHK1-202ENST00000392496 LIMCH1Q9UPQ0 1083 aa25.51■■□□□ 1.67
SPHK1-202ENST00000392496 TNRC6CQ9HCJ0 1690 aaKnown RBP25.51■■□□□ 1.67
SPHK1-202ENST00000392496 HSPD1P10809 573 aaKnown RBP25.51■■□□□ 1.67
SPHK1-202ENST00000392496 ADD2P35612 726 aa25.51■■□□□ 1.67
SPHK1-202ENST00000392496 NOL8Q76FK4 1167 aaKnown RBP25.51■■□□□ 1.67
SPHK1-202ENST00000392496 CNBD1Q8NA66 436 aa25.51■■□□□ 1.67
SPHK1-202ENST00000392496 PIH1D3Q9NQM4 214 aaKnown RBP25.51■■□□□ 1.67
SPHK1-202ENST00000392496 CPA1P15085 419 aa25.5■■□□□ 1.67
SPHK1-202ENST00000392496 TM4SF1P30408 202 aa25.5■■□□□ 1.67
SPHK1-202ENST00000392496 BLOC1S2Q6QNY1 142 aa25.5■■□□□ 1.67
SPHK1-202ENST00000392496 ALDH8A1Q9H2A2 487 aaPredicted RBP25.5■■□□□ 1.67
SPHK1-202ENST00000392496 DOCK2Q92608 1830 aa25.5■■□□□ 1.67
SPHK1-202ENST00000392496 RASGRF1Q13972 1273 aa25.49■■□□□ 1.67
SPHK1-202ENST00000392496 UBE3CQ15386 1083 aa25.49■■□□□ 1.67
SPHK1-202ENST00000392496 CCDC24Q8N4L8 307 aa25.49■■□□□ 1.67
SPHK1-202ENST00000392496 TNPO1Q92973 898 aaKnown RBP25.49■■□□□ 1.67
SPHK1-202ENST00000392496 CYP21A2P08686 494 aa25.49■■□□□ 1.67
SPHK1-202ENST00000392496 BCAMP50895 628 aa25.49■■□□□ 1.67
SPHK1-202ENST00000392496 TAF6LQ9Y6J9 622 aa25.49■■□□□ 1.67
SPHK1-202ENST00000392496 MYO5AQ9Y4I1 1855 aaKnown RBP25.48■■□□□ 1.67
SPHK1-202ENST00000392496 ZSCAN31Q96LW9 406 aaPredicted RBP25.48■■□□□ 1.67
SPHK1-202ENST00000392496 ANKRD2Q9GZV1 360 aa25.48■■□□□ 1.67
SPHK1-202ENST00000392496 ZNF804BA4D1E1 1349 aa25.48■■□□□ 1.67
SPHK1-202ENST00000392496 RPS6KB1P23443 525 aa25.47■■□□□ 1.67
SPHK1-202ENST00000392496 MCM4P33991 863 aa25.47■■□□□ 1.67
SPHK1-202ENST00000392496 SLC9C2Q5TAH2 1124 aa25.47■■□□□ 1.67
SPHK1-202ENST00000392496 PRR5LQ6MZQ0 368 aa25.47■■□□□ 1.67
SPHK1-202ENST00000392496 IDH1O75874 414 aaKnown RBP25.46■■□□□ 1.67
SPHK1-202ENST00000392496 PUS7LQ9H0K6 701 aaKnown RBP25.46■■□□□ 1.67
SPHK1-202ENST00000392496 ANKRD1Q15327 319 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms