RNA–Protein interactions for RNA: ENST00000391901.7

ZNF541-203, Transcript of zinc finger protein 541, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZNF541, Length 4,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-203ENST00000391901 SLAIN2Q9P270 581 aa16.65■□□□□ 0.26
ZNF541-203ENST00000391901 SLC27A2O14975 620 aa16.65■□□□□ 0.26
ZNF541-203ENST00000391901 FAM200AQ8TCP9 573 aa16.65■□□□□ 0.26
ZNF541-203ENST00000391901 EDC3Q96F86 508 aaKnown RBP16.65■□□□□ 0.26
ZNF541-203ENST00000391901 CAVIN2O95810 425 aa16.64■□□□□ 0.25
ZNF541-203ENST00000391901 NOLC1Q14978 699 aaKnown RBP eCLIP16.64■□□□□ 0.25
ZNF541-203ENST00000391901 RAB34Q9BZG1 259 aa16.64■□□□□ 0.25
ZNF541-203ENST00000391901 DNAJC25Q9H1X3 360 aa16.64■□□□□ 0.25
ZNF541-203ENST00000391901 F8W031 263 aaPredicted RBP16.64■□□□□ 0.25
ZNF541-203ENST00000391901 IDEP14735 1019 aa16.64■□□□□ 0.25
ZNF541-203ENST00000391901 CCDC181Q5TID7 509 aa16.64■□□□□ 0.25
ZNF541-203ENST00000391901 FAM173BQ6P4H8 233 aa16.64■□□□□ 0.25
ZNF541-203ENST00000391901 PAXIP1Q6ZW49 1069 aaPredicted RBP16.64■□□□□ 0.25
ZNF541-203ENST00000391901 NSFL1CQ9UNZ2 370 aaKnown RBP16.64■□□□□ 0.25
ZNF541-203ENST00000391901 SH3TC1Q8TE82 1336 aa16.64■□□□□ 0.25
ZNF541-203ENST00000391901 KIAA1328Q86T90 577 aa16.64■□□□□ 0.25
ZNF541-203ENST00000391901 TCP11L1Q9NUJ3 509 aa16.64■□□□□ 0.25
ZNF541-203ENST00000391901 CHD1O14646 1710 aa16.64■□□□□ 0.25
ZNF541-203ENST00000391901 AOX1Q06278 1338 aa16.64■□□□□ 0.25
ZNF541-203ENST00000391901 MAGEB6P1A0A0J9YX57 407 aa16.63■□□□□ 0.25
ZNF541-203ENST00000391901 HSP90AA4PQ58FG1 418 aa16.63■□□□□ 0.25
ZNF541-203ENST00000391901 NEURL1BA8MQ27 555 aa16.63■□□□□ 0.25
ZNF541-203ENST00000391901 NEMFO60524 1076 aa16.63■□□□□ 0.25
ZNF541-203ENST00000391901 ST5P78524 1137 aa16.63■□□□□ 0.25
ZNF541-203ENST00000391901 SKIDA1Q1XH10 827 aa16.63■□□□□ 0.25
ZNF541-203ENST00000391901 TMEM266Q2M3C6 531 aa16.63■□□□□ 0.25
ZNF541-203ENST00000391901 XAGE2Q96GT9 111 aa16.63■□□□□ 0.25
ZNF541-203ENST00000391901 RTCBQ9Y3I0 505 aaKnown RBP16.63■□□□□ 0.25
ZNF541-203ENST00000391901 URI1O94763 535 aaPredicted RBP16.63■□□□□ 0.25
ZNF541-203ENST00000391901 TTC12Q9H892 705 aaPredicted RBP16.63■□□□□ 0.25
ZNF541-203ENST00000391901 SPTLC2O15270 562 aa16.62■□□□□ 0.25
ZNF541-203ENST00000391901 TSPY3P0CV98 308 aa16.62■□□□□ 0.25
ZNF541-203ENST00000391901 TSPY8P0CW00 308 aa16.62■□□□□ 0.25
ZNF541-203ENST00000391901 RPS6KB1P23443 525 aa16.62■□□□□ 0.25
ZNF541-203ENST00000391901 PRM3Q9NNZ6 103 aa16.62■□□□□ 0.25
ZNF541-203ENST00000391901 HELLSQ9NRZ9 838 aa16.62■□□□□ 0.25
ZNF541-203ENST00000391901 ZSCAN12O43309 604 aa16.62■□□□□ 0.25
ZNF541-203ENST00000391901 MBD4O95243 580 aa16.62■□□□□ 0.25
ZNF541-203ENST00000391901 PHKG2P15735 406 aa16.62■□□□□ 0.25
ZNF541-203ENST00000391901 GTPBP4Q9BZE4 634 aaKnown RBP16.62■□□□□ 0.25
ZNF541-203ENST00000391901 KIF24Q5T7B8 1368 aa16.62■□□□□ 0.25
ZNF541-203ENST00000391901 KBTBD3Q8NAB2 608 aa16.62■□□□□ 0.25
ZNF541-203ENST00000391901 CCDC12Q8WUD4 166 aaPredicted RBP16.62■□□□□ 0.25
ZNF541-203ENST00000391901 UBA5Q9GZZ9 404 aa16.62■□□□□ 0.25
ZNF541-203ENST00000391901 PLEKHG1Q9ULL1 1385 aa16.61■□□□□ 0.25
ZNF541-203ENST00000391901 CDC42BPAQ5VT25 1732 aa16.61■□□□□ 0.25
ZNF541-203ENST00000391901 AFMP43652 599 aa16.61■□□□□ 0.25
ZNF541-203ENST00000391901 BEND3Q5T5X7 828 aa16.61■□□□□ 0.25
ZNF541-203ENST00000391901 ZKSCAN3Q9BRR0 538 aa16.61■□□□□ 0.25
ZNF541-203ENST00000391901 SEPT11Q9NVA2 429 aaKnown RBP16.61■□□□□ 0.25
ZNF541-203ENST00000391901 VGLL3A8MV65 326 aa16.61■□□□□ 0.25
ZNF541-203ENST00000391901 EAF2Q96CJ1 260 aaPredicted RBP16.61■□□□□ 0.25
ZNF541-203ENST00000391901 IGSF1Q8N6C5 1336 aa16.61■□□□□ 0.25
ZNF541-203ENST00000391901 GSTO1P78417 241 aa16.6■□□□□ 0.25
ZNF541-203ENST00000391901 TYRO3Q06418 890 aa16.6■□□□□ 0.25
ZNF541-203ENST00000391901 CCDC186Q7Z3E2 898 aa16.6■□□□□ 0.25
ZNF541-203ENST00000391901 RBSNQ9H1K0 784 aa16.6■□□□□ 0.25
ZNF541-203ENST00000391901 MCM9Q9NXL9 1143 aa16.6■□□□□ 0.25
ZNF541-203ENST00000391901 CFAP74Q9C0B2 1584 aa16.6■□□□□ 0.25
ZNF541-203ENST00000391901 CDR1P51861 262 aa16.6■□□□□ 0.25
ZNF541-203ENST00000391901 GSDMDP57764 484 aa16.6■□□□□ 0.25
ZNF541-203ENST00000391901 AXDND1Q5T1B0 1012 aaPredicted RBP16.6■□□□□ 0.25
ZNF541-203ENST00000391901 TIGD1Q96MW7 591 aa16.6■□□□□ 0.25
ZNF541-203ENST00000391901 NCOA5Q9HCD5 579 aaKnown RBP16.6■□□□□ 0.25
ZNF541-203ENST00000391901 HLA-DOAP06340 250 aa16.6■□□□□ 0.25
ZNF541-203ENST00000391901 FKBP15Q5T1M5 1219 aa16.6■□□□□ 0.25
ZNF541-203ENST00000391901 GNAT2P19087 354 aa16.6■□□□□ 0.25
ZNF541-203ENST00000391901 NUP88Q99567 741 aaPredicted RBP16.6■□□□□ 0.25
ZNF541-203ENST00000391901 NYXQ9GZU5 481 aa16.6■□□□□ 0.25
ZNF541-203ENST00000391901 ATP7BP35670 1465 aa16.6■□□□□ 0.25
ZNF541-203ENST00000391901 HSPA4P34932 840 aa16.59■□□□□ 0.25
ZNF541-203ENST00000391901 PROSER3Q2NL68 480 aa16.59■□□□□ 0.25
ZNF541-203ENST00000391901 ZNF397Q8NF99 534 aaPredicted RBP16.59■□□□□ 0.25
ZNF541-203ENST00000391901 GNPATO15228 680 aa16.59■□□□□ 0.25
ZNF541-203ENST00000391901 KANK3Q6NY19 840 aa16.59■□□□□ 0.25
ZNF541-203ENST00000391901 LEKR1Q6ZMV7 388 aa16.59■□□□□ 0.25
ZNF541-203ENST00000391901 USP6P35125 1406 aa16.59■□□□□ 0.25
ZNF541-203ENST00000391901 B4E1Z4 1266 aa16.59■□□□□ 0.25
ZNF541-203ENST00000391901 TAF5LO75529 589 aa16.59■□□□□ 0.25
ZNF541-203ENST00000391901 ENOX2Q16206 610 aaKnown RBP16.59■□□□□ 0.25
ZNF541-203ENST00000391901 TTLL7Q6ZT98 887 aa16.59■□□□□ 0.25
ZNF541-203ENST00000391901 ARHGEF25Q86VW2 580 aa16.59■□□□□ 0.25
ZNF541-203ENST00000391901 PDE8AO60658 829 aa16.58■□□□□ 0.25
ZNF541-203ENST00000391901 ERLIN1O75477 346 aa16.58■□□□□ 0.25
ZNF541-203ENST00000391901 ZNF853P0CG23 659 aa16.58■□□□□ 0.25
ZNF541-203ENST00000391901 PICALMQ13492 652 aa16.58■□□□□ 0.25
ZNF541-203ENST00000391901 KIF4BQ2VIQ3 1234 aa16.58■□□□□ 0.25
ZNF541-203ENST00000391901 TMCO3Q6UWJ1 677 aa16.58■□□□□ 0.25
ZNF541-203ENST00000391901 AOPEPQ8N6M6 819 aa16.58■□□□□ 0.25
ZNF541-203ENST00000391901 APPBP2Q92624 585 aa16.58■□□□□ 0.25
ZNF541-203ENST00000391901 CCDC94Q9BW85 323 aaPredicted RBP16.58■□□□□ 0.25
ZNF541-203ENST00000391901 TMX1Q9H3N1 280 aa16.58■□□□□ 0.25
ZNF541-203ENST00000391901 PATL2C9JE40 543 aaKnown RBP16.58■□□□□ 0.25
ZNF541-203ENST00000391901 GPAA1O43292 621 aa16.58■□□□□ 0.25
ZNF541-203ENST00000391901 TRMT1LQ7Z2T5 733 aaKnown RBP16.58■□□□□ 0.25
ZNF541-203ENST00000391901 CACNA2D4Q7Z3S7 1137 aa16.58■□□□□ 0.25
ZNF541-203ENST00000391901 TXLNBQ8N3L3 684 aa16.58■□□□□ 0.25
ZNF541-203ENST00000391901 CALML4Q96GE6 196 aa16.58■□□□□ 0.25
ZNF541-203ENST00000391901 LMTK3Q96Q04 1460 aa16.58■□□□□ 0.24
ZNF541-203ENST00000391901 PALD1Q9ULE6 856 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms