RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 KRT24Q2M2I5 525 aa10.97□□□□□ -0.65
TRAV17-201ENST00000390445 KIF6Q6ZMV9 814 aa10.97□□□□□ -0.65
TRAV17-201ENST00000390445 SLC51AQ86UW1 340 aa10.97□□□□□ -0.65
TRAV17-201ENST00000390445 C7orf43Q8WVR3 580 aa10.97□□□□□ -0.65
TRAV17-201ENST00000390445 NECTIN2Q92692 538 aa10.97□□□□□ -0.65
TRAV17-201ENST00000390445 POLR2AP24928 1970 aaKnown RBP10.96□□□□□ -0.65
TRAV17-201ENST00000390445 SPEF2Q9C093 1822 aa10.96□□□□□ -0.65
TRAV17-201ENST00000390445 ADAMTSL1Q8N6G6 1762 aa10.96□□□□□ -0.65
TRAV17-201ENST00000390445 LTBP1Q14766 1721 aa10.96□□□□□ -0.65
TRAV17-201ENST00000390445 COL4A5P29400 1685 aa10.96□□□□□ -0.65
TRAV17-201ENST00000390445 LTBP3Q9NS15 1303 aa10.96□□□□□ -0.65
TRAV17-201ENST00000390445 ERVV-1B6SEH8 477 aa10.96□□□□□ -0.65
TRAV17-201ENST00000390445 CFHP08603 1231 aa10.96□□□□□ -0.65
TRAV17-201ENST00000390445 VEGFAP15692 232 aaPredicted RBP10.96□□□□□ -0.65
TRAV17-201ENST00000390445 GTF2E1P29083 439 aaPredicted RBP10.96□□□□□ -0.65
TRAV17-201ENST00000390445 GCGRP47871 477 aa10.96□□□□□ -0.65
TRAV17-201ENST00000390445 SUSD4Q5VX71 490 aa10.96□□□□□ -0.65
TRAV17-201ENST00000390445 LRP10Q7Z4F1 713 aa10.96□□□□□ -0.65
TRAV17-201ENST00000390445 DNAJC5GQ8N7S2 189 aa10.96□□□□□ -0.65
TRAV17-201ENST00000390445 MYH3P11055 1940 aa10.96□□□□□ -0.66
TRAV17-201ENST00000390445 TRPM7Q96QT4 1865 aa10.95□□□□□ -0.66
TRAV17-201ENST00000390445 SNED1Q8TER0 1413 aa10.95□□□□□ -0.66
TRAV17-201ENST00000390445 DDNO94850 711 aaPredicted RBP10.95□□□□□ -0.66
TRAV17-201ENST00000390445 SLC4A3P48751 1232 aa10.95□□□□□ -0.66
TRAV17-201ENST00000390445 FSTL1Q12841 308 aa10.95□□□□□ -0.66
TRAV17-201ENST00000390445 CCDC93Q567U6 631 aa10.95□□□□□ -0.66
TRAV17-201ENST00000390445 SMC1BQ8NDV3 1235 aa10.95□□□□□ -0.66
TRAV17-201ENST00000390445 TMEM132AQ24JP5 1023 aa10.94□□□□□ -0.66
TRAV17-201ENST00000390445 SOGA3Q5TF21 947 aa10.94□□□□□ -0.66
TRAV17-201ENST00000390445 ZNF34Q8IZ26 560 aa10.94□□□□□ -0.66
TRAV17-201ENST00000390445 ZNF428Q96B54 188 aa10.94□□□□□ -0.66
TRAV17-201ENST00000390445 ZNF277Q9NRM2 450 aaPredicted RBP10.94□□□□□ -0.66
TRAV17-201ENST00000390445 WBP1LQ9NX94 342 aa10.94□□□□□ -0.66
TRAV17-201ENST00000390445 TSR3Q9UJK0 312 aaKnown RBP10.94□□□□□ -0.66
TRAV17-201ENST00000390445 ADAMTS8Q9UP79 889 aa10.94□□□□□ -0.66
TRAV17-201ENST00000390445 LAS1LQ9Y4W2 734 aaKnown RBP10.94□□□□□ -0.66
TRAV17-201ENST00000390445 CACNA1FO60840 1977 aa10.94□□□□□ -0.66
TRAV17-201ENST00000390445 IBTKQ9P2D0 1353 aaPredicted RBP10.93□□□□□ -0.66
TRAV17-201ENST00000390445 LRRC37AA6NMS7 1700 aa10.93□□□□□ -0.66
TRAV17-201ENST00000390445 ERBB4Q15303 1308 aa10.93□□□□□ -0.66
TRAV17-201ENST00000390445 ZNF541Q9H0D2 1346 aa10.93□□□□□ -0.66
TRAV17-201ENST00000390445 COL4A1P02462 1669 aa10.93□□□□□ -0.66
TRAV17-201ENST00000390445 NTSR2O95665 410 aa10.93□□□□□ -0.66
TRAV17-201ENST00000390445 PPP4CP60510 307 aa10.93□□□□□ -0.66
TRAV17-201ENST00000390445 FKBP4Q02790 459 aaKnown RBP eCLIP10.93□□□□□ -0.66
TRAV17-201ENST00000390445 LMOD3Q0VAK6 560 aa10.93□□□□□ -0.66
TRAV17-201ENST00000390445 AIMP1Q12904 312 aaKnown RBP10.93□□□□□ -0.66
TRAV17-201ENST00000390445 WDR43Q15061 677 aaKnown RBP eCLIP10.93□□□□□ -0.66
TRAV17-201ENST00000390445 CRY2Q49AN0 593 aa10.93□□□□□ -0.66
TRAV17-201ENST00000390445 SPIRE2Q8WWL2 714 aa10.93□□□□□ -0.66
TRAV17-201ENST00000390445 RUNDC1Q96C34 613 aa10.93□□□□□ -0.66
TRAV17-201ENST00000390445 TBC1D2Q9BYX2 928 aa10.93□□□□□ -0.66
TRAV17-201ENST00000390445 NYXQ9GZU5 481 aa10.93□□□□□ -0.66
TRAV17-201ENST00000390445 RIC1Q4ADV7 1423 aa10.92□□□□□ -0.66
TRAV17-201ENST00000390445 CHL1O00533 1208 aa10.92□□□□□ -0.66
TRAV17-201ENST00000390445 TCERG1O14776 1098 aaKnown RBP10.92□□□□□ -0.66
TRAV17-201ENST00000390445 ALDH1B1P30837 517 aa10.92□□□□□ -0.66
TRAV17-201ENST00000390445 XAGE3Q8WTP9 111 aa10.92□□□□□ -0.66
TRAV17-201ENST00000390445 PRKRIP1Q9H875 184 aaPredicted RBP10.92□□□□□ -0.66
TRAV17-201ENST00000390445 KDM4AO75164 1064 aa10.91□□□□□ -0.66
TRAV17-201ENST00000390445 IARSP41252 1262 aaKnown RBP10.91□□□□□ -0.66
TRAV17-201ENST00000390445 COPS6Q7L5N1 327 aa10.91□□□□□ -0.66
TRAV17-201ENST00000390445 SYNE4Q8N205 404 aa10.91□□□□□ -0.66
TRAV17-201ENST00000390445 RPGRQ92834 1020 aaKnown RBP10.91□□□□□ -0.66
TRAV17-201ENST00000390445 KLRG1Q96E93 195 aa10.91□□□□□ -0.66
TRAV17-201ENST00000390445 BABAM1Q9NWV8 329 aa10.91□□□□□ -0.66
TRAV17-201ENST00000390445 PTPN5P54829 565 aa10.9□□□□□ -0.66
TRAV17-201ENST00000390445 MYSM1Q5VVJ2 828 aa10.9□□□□□ -0.66
TRAV17-201ENST00000390445 RTKN2Q8IZC4 609 aa10.9□□□□□ -0.66
TRAV17-201ENST00000390445 CHPF2Q9P2E5 772 aa10.9□□□□□ -0.66
TRAV17-201ENST00000390445 SCN9AQ15858 1988 aa10.89□□□□□ -0.67
TRAV17-201ENST00000390445 PPEF1O14829 653 aaPredicted RBP10.89□□□□□ -0.67
TRAV17-201ENST00000390445 HOXA10P31260 410 aaPredicted RBP10.89□□□□□ -0.67
TRAV17-201ENST00000390445 FUT2Q10981 343 aa10.89□□□□□ -0.67
TRAV17-201ENST00000390445 PPP1R42Q7Z4L9 355 aa10.89□□□□□ -0.67
TRAV17-201ENST00000390445 HLA-CQ95604 372 aa10.89□□□□□ -0.67
TRAV17-201ENST00000390445 RNF166Q96A37 237 aaPredicted RBP10.89□□□□□ -0.67
TRAV17-201ENST00000390445 UTP14AQ9BVJ6 771 aaKnown RBP10.89□□□□□ -0.67
TRAV17-201ENST00000390445 PSME4Q14997 1843 aa10.88□□□□□ -0.67
TRAV17-201ENST00000390445 RNF123Q5XPI4 1314 aa10.88□□□□□ -0.67
TRAV17-201ENST00000390445 APAF1O14727 1248 aa10.88□□□□□ -0.67
TRAV17-201ENST00000390445 HCLS1P14317 486 aaPredicted RBP10.88□□□□□ -0.67
TRAV17-201ENST00000390445 KMT5BQ4FZB7 885 aa10.88□□□□□ -0.67
TRAV17-201ENST00000390445 CCDC184Q52MB2 194 aa10.88□□□□□ -0.67
TRAV17-201ENST00000390445 PARP10Q53GL7 1025 aa10.88□□□□□ -0.67
TRAV17-201ENST00000390445 SH3D19Q5HYK7 790 aa10.88□□□□□ -0.67
TRAV17-201ENST00000390445 HDGFL1Q5TGJ6 251 aa10.88□□□□□ -0.67
TRAV17-201ENST00000390445 NLRP10Q86W26 655 aa10.88□□□□□ -0.67
TRAV17-201ENST00000390445 RBM17Q96I25 401 aaKnown RBP10.88□□□□□ -0.67
TRAV17-201ENST00000390445 PSMD1Q99460 953 aa10.88□□□□□ -0.67
TRAV17-201ENST00000390445 DDX21Q9NR30 783 aaKnown RBP eCLIP10.88□□□□□ -0.67
TRAV17-201ENST00000390445 DUOX1Q9NRD9 1551 aa10.88□□□□□ -0.67
TRAV17-201ENST00000390445 MBIPQ9NS73 344 aa10.88□□□□□ -0.67
TRAV17-201ENST00000390445 ABCC4O15439 1325 aa10.87□□□□□ -0.67
TRAV17-201ENST00000390445 MOXD2PA6NHM9 499 aa10.87□□□□□ -0.67
TRAV17-201ENST00000390445 FZD9O00144 591 aa10.87□□□□□ -0.67
TRAV17-201ENST00000390445 HOXA2O43364 376 aa10.87□□□□□ -0.67
TRAV17-201ENST00000390445 ACTN4O43707 911 aaKnown RBP10.87□□□□□ -0.67
TRAV17-201ENST00000390445 TCIRG1Q13488 830 aa10.87□□□□□ -0.67
TRAV17-201ENST00000390445 DUSP27Q5VZP5 1158 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms