RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 TATP17735 454 aaPredicted RBP9.48□□□□□ -0.89
TRBV28-201ENST00000390400 TAS1R3Q7RTX0 852 aa9.48□□□□□ -0.89
TRBV28-201ENST00000390400 CCDC146Q8IYE0 955 aa9.48□□□□□ -0.89
TRBV28-201ENST00000390400 RUNDC1Q96C34 613 aa9.48□□□□□ -0.89
TRBV28-201ENST00000390400 THRAP3Q9Y2W1 955 aaKnown RBP9.48□□□□□ -0.89
TRBV28-201ENST00000390400 PCDHB11Q9Y5F2 797 aa9.48□□□□□ -0.89
TRBV28-201ENST00000390400 PARP4Q9UKK3 1724 aaKnown RBP9.48□□□□□ -0.89
TRBV28-201ENST00000390400 MEGF6O75095 1541 aa9.47□□□□□ -0.89
TRBV28-201ENST00000390400 IL2RBP14784 551 aa9.47□□□□□ -0.89
TRBV28-201ENST00000390400 SCTRP47872 440 aa9.47□□□□□ -0.89
TRBV28-201ENST00000390400 ATP1A2P50993 1020 aa9.47□□□□□ -0.89
TRBV28-201ENST00000390400 SEC13P55735 322 aa9.47□□□□□ -0.89
TRBV28-201ENST00000390400 SKOR1P84550 965 aa9.47□□□□□ -0.89
TRBV28-201ENST00000390400 ECM1Q16610 540 aa9.47□□□□□ -0.89
TRBV28-201ENST00000390400 NYAP1Q6ZVC0 841 aa9.47□□□□□ -0.89
TRBV28-201ENST00000390400 ZNF592Q92610 1267 aa9.47□□□□□ -0.89
TRBV28-201ENST00000390400 PLEKHF1Q96S99 279 aa9.47□□□□□ -0.89
TRBV28-201ENST00000390400 BACH2Q9BYV9 841 aa9.47□□□□□ -0.89
TRBV28-201ENST00000390400 QTRT2Q9H974 415 aaKnown RBP9.47□□□□□ -0.89
TRBV28-201ENST00000390400 CXXC1Q9P0U4 656 aaPredicted RBP9.47□□□□□ -0.89
TRBV28-201ENST00000390400 PLEKHG2Q9H7P9 1386 aa9.47□□□□□ -0.89
TRBV28-201ENST00000390400 OVOS2A0A0G2JMS6 1433 aa9.47□□□□□ -0.89
TRBV28-201ENST00000390400 PLEKHO1Q53GL0 409 aaPredicted RBP9.46□□□□□ -0.9
TRBV28-201ENST00000390400 TRMT44Q8IYL2 757 aaKnown RBP9.46□□□□□ -0.9
TRBV28-201ENST00000390400 C1orf216Q8TAB5 229 aa9.46□□□□□ -0.9
TRBV28-201ENST00000390400 ANO2Q9NQ90 1003 aa9.46□□□□□ -0.9
TRBV28-201ENST00000390400 DISP2A7MBM2 1401 aa9.46□□□□□ -0.9
TRBV28-201ENST00000390400 GLI3P10071 1580 aa9.46□□□□□ -0.9
TRBV28-201ENST00000390400 RAB15P59190 212 aa9.45□□□□□ -0.9
TRBV28-201ENST00000390400 AMOTQ4VCS5 1084 aa9.45□□□□□ -0.9
TRBV28-201ENST00000390400 SLC10A4Q96EP9 437 aa9.45□□□□□ -0.9
TRBV28-201ENST00000390400 PHACTR3Q96KR7 559 aa9.45□□□□□ -0.9
TRBV28-201ENST00000390400 SEPT3Q9UH03 358 aa9.45□□□□□ -0.9
TRBV28-201ENST00000390400 SPG7Q9UQ90 795 aa9.45□□□□□ -0.9
TRBV28-201ENST00000390400 PKD1L3Q7Z443 1732 aa9.45□□□□□ -0.9
TRBV28-201ENST00000390400 A0A0G2JS52 829 aa9.44□□□□□ -0.9
TRBV28-201ENST00000390400 ZNF211Q13398 564 aaPredicted RBP9.44□□□□□ -0.9
TRBV28-201ENST00000390400 NFE2L2Q16236 605 aa9.44□□□□□ -0.9
TRBV28-201ENST00000390400 ZNF530Q6P9A1 599 aaPredicted RBP9.44□□□□□ -0.9
TRBV28-201ENST00000390400 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.44□□□□□ -0.9
TRBV28-201ENST00000390400 TSEN2Q8NCE0 465 aaKnown RBP9.44□□□□□ -0.9
TRBV28-201ENST00000390400 DLG5Q8TDM6 1919 aa9.43□□□□□ -0.9
TRBV28-201ENST00000390400 APAF1O14727 1248 aa9.43□□□□□ -0.9
TRBV28-201ENST00000390400 RBM6P78332 1123 aaKnown RBP9.43□□□□□ -0.9
TRBV28-201ENST00000390400 MTHFSDQ2M296 383 aaKnown RBP9.43□□□□□ -0.9
TRBV28-201ENST00000390400 L1TD1Q5T7N2 865 aaKnown RBP9.43□□□□□ -0.9
TRBV28-201ENST00000390400 ZCRB1Q8TBF4 217 aaKnown RBP9.43□□□□□ -0.9
TRBV28-201ENST00000390400 ISY1Q9ULR0 285 aaKnown RBP9.43□□□□□ -0.9
TRBV28-201ENST00000390400 KAT6BQ8WYB5 2073 aa9.43□□□□□ -0.9
TRBV28-201ENST00000390400 THSD7AQ9UPZ6 1657 aa9.42□□□□□ -0.9
TRBV28-201ENST00000390400 LRRC37A3O60309 1634 aa9.42□□□□□ -0.9
TRBV28-201ENST00000390400 TNS2Q63HR2 1409 aa9.42□□□□□ -0.9
TRBV28-201ENST00000390400 PCDH11XQ9BZA7 1347 aa9.42□□□□□ -0.9
TRBV28-201ENST00000390400 PCDH11YQ9BZA8 1340 aa9.42□□□□□ -0.9
TRBV28-201ENST00000390400 EXOC5O00471 708 aa9.42□□□□□ -0.9
TRBV28-201ENST00000390400 RRP9O43818 475 aaKnown RBP9.42□□□□□ -0.9
TRBV28-201ENST00000390400 RXRBP28702 533 aa9.42□□□□□ -0.9
TRBV28-201ENST00000390400 TMPOP42166 694 aaKnown RBP9.42□□□□□ -0.9
TRBV28-201ENST00000390400 LMOD3Q0VAK6 560 aa9.42□□□□□ -0.9
TRBV28-201ENST00000390400 DDB1Q16531 1140 aa9.42□□□□□ -0.9
TRBV28-201ENST00000390400 INTS6LQ5JSJ4 861 aaKnown RBP9.42□□□□□ -0.9
TRBV28-201ENST00000390400 C1orf141Q5JVX7 400 aa9.42□□□□□ -0.9
TRBV28-201ENST00000390400 NGEFQ8N5V2 710 aa9.42□□□□□ -0.9
TRBV28-201ENST00000390400 KCTD15Q96SI1 283 aaPredicted RBP9.42□□□□□ -0.9
TRBV28-201ENST00000390400 PCDH10Q9P2E7 1040 aa9.42□□□□□ -0.9
TRBV28-201ENST00000390400 RGS17Q9UGC6 210 aaPredicted RBP9.42□□□□□ -0.9
TRBV28-201ENST00000390400 RRP7AQ9Y3A4 280 aaKnown RBP9.42□□□□□ -0.9
TRBV28-201ENST00000390400 MAP3K5Q99683 1374 aa9.41□□□□□ -0.9
TRBV28-201ENST00000390400 SENP3-EIF4A1A0A087X0R7 540 aa9.41□□□□□ -0.9
TRBV28-201ENST00000390400 TMEM229AB2RXF0 380 aa9.41□□□□□ -0.9
TRBV28-201ENST00000390400 RNF223E7ERA6 249 aa9.41□□□□□ -0.9
TRBV28-201ENST00000390400 E9PSI1 815 aa9.41□□□□□ -0.9
TRBV28-201ENST00000390400 ERVH48-1M5A8F1 160 aa9.41□□□□□ -0.9
TRBV28-201ENST00000390400 WEE1P30291 646 aa9.41□□□□□ -0.9
TRBV28-201ENST00000390400 RIPK4P57078 832 aa9.41□□□□□ -0.9
TRBV28-201ENST00000390400 FKBP5Q13451 457 aaPredicted RBP9.41□□□□□ -0.9
TRBV28-201ENST00000390400 RNF20Q5VTR2 975 aa9.41□□□□□ -0.9
TRBV28-201ENST00000390400 PKNOX2Q96KN3 472 aa9.41□□□□□ -0.9
TRBV28-201ENST00000390400 MKNK1Q9BUB5 465 aa9.41□□□□□ -0.9
TRBV28-201ENST00000390400 SHANK3Q9BYB0 1731 aa9.41□□□□□ -0.9
TRBV28-201ENST00000390400 RBM47A0AV96 593 aaKnown RBP9.4□□□□□ -0.9
TRBV28-201ENST00000390400 GNAT3A8MTJ3 354 aa9.4□□□□□ -0.9
TRBV28-201ENST00000390400 HSP90AB1P08238 724 aaKnown RBP9.4□□□□□ -0.9
TRBV28-201ENST00000390400 USP4Q13107 963 aa9.4□□□□□ -0.9
TRBV28-201ENST00000390400 MTMR3Q13615 1198 aa9.4□□□□□ -0.9
TRBV28-201ENST00000390400 AKAP4Q5JQC9 854 aa9.4□□□□□ -0.9
TRBV28-201ENST00000390400 POTEAQ6S8J7 498 aa9.4□□□□□ -0.9
TRBV28-201ENST00000390400 SEPT12Q8IYM1 358 aa9.4□□□□□ -0.9
TRBV28-201ENST00000390400 IFNL2Q8IZJ0 200 aa9.4□□□□□ -0.9
TRBV28-201ENST00000390400 DDX54Q8TDD1 881 aaKnown RBP9.4□□□□□ -0.9
TRBV28-201ENST00000390400 RTF1Q92541 710 aaKnown RBP9.4□□□□□ -0.9
TRBV28-201ENST00000390400 TMPRSS4Q9NRS4 437 aa9.4□□□□□ -0.9
TRBV28-201ENST00000390400 KIAA1522Q9P206 1035 aaPredicted RBP9.4□□□□□ -0.9
TRBV28-201ENST00000390400 DNMT3AQ9Y6K1 912 aaPredicted RBP9.4□□□□□ -0.9
TRBV28-201ENST00000390400 CYP27B1O15528 508 aa9.39□□□□□ -0.91
TRBV28-201ENST00000390400 HTATSF1O43719 755 aaKnown RBP9.39□□□□□ -0.91
TRBV28-201ENST00000390400 ABL1P00519 1130 aa9.39□□□□□ -0.91
TRBV28-201ENST00000390400 PHKG2P15735 406 aa9.39□□□□□ -0.91
TRBV28-201ENST00000390400 SCNN1DP51172 638 aa9.39□□□□□ -0.91
TRBV28-201ENST00000390400 RRP1P56182 461 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms