RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 ABCA8O94911 1581 aa15.08■□□□□ 0
TRAPPC9-201ENST00000389328 YEATS4O95619 227 aa15.08■□□□□ 0
TRAPPC9-201ENST00000389328 SUCLG2Q96I99 432 aa15.08■□□□□ 0
TRAPPC9-201ENST00000389328 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.08■□□□□ 0
TRAPPC9-201ENST00000389328 TIMM10P62072 90 aa15.07■□□□□ 0
TRAPPC9-201ENST00000389328 NCBP1Q09161 790 aaKnown RBP15.07■□□□□ 0
TRAPPC9-201ENST00000389328 ARID5BQ14865 1188 aa15.07■□□□□ 0
TRAPPC9-201ENST00000389328 ZNF569Q5MCW4 686 aa15.07■□□□□ 0
TRAPPC9-201ENST00000389328 TDRD7Q8NHU6 1098 aaKnown RBP15.07■□□□□ 0
TRAPPC9-201ENST00000389328 MPHOSPH8Q99549 860 aa15.07■□□□□ 0
TRAPPC9-201ENST00000389328 GOLGA6L10A6NI86 522 aa15.07■□□□□ 0
TRAPPC9-201ENST00000389328 MATR3P43243 847 aaKnown RBP eCLIP15.07■□□□□ 04e-7■■■■□ 25.8
TRAPPC9-201ENST00000389328 ZNF202O95125 648 aa15.07■□□□□ 0
TRAPPC9-201ENST00000389328 IFIT5Q13325 482 aaKnown RBP15.07■□□□□ 0
TRAPPC9-201ENST00000389328 IL17REQ8NFR9 667 aa15.07■□□□□ 0
TRAPPC9-201ENST00000389328 ZBTB43O43298 467 aa15.07■□□□□ 0
TRAPPC9-201ENST00000389328 HOXC9P31274 260 aa15.07■□□□□ 0
TRAPPC9-201ENST00000389328 USP8P40818 1118 aa15.06■□□□□ 0
TRAPPC9-201ENST00000389328 C11orf57Q6ZUT1 292 aaPredicted RBP15.06■□□□□ 0
TRAPPC9-201ENST00000389328 NEK11Q8NG66 645 aa15.06■□□□□ 0
TRAPPC9-201ENST00000389328 MRFAP1L1Q96HT8 127 aa15.06■□□□□ 0
TRAPPC9-201ENST00000389328 FTOQ9C0B1 505 aaKnown RBP eCLIP15.06■□□□□ 01e-10■■■■■ 27.2
TRAPPC9-201ENST00000389328 MYOM2P54296 1465 aa15.06■□□□□ 0
TRAPPC9-201ENST00000389328 ODF2Q5BJF6 829 aa15.06■□□□□ 0
TRAPPC9-201ENST00000389328 AKAP4Q5JQC9 854 aa15.06■□□□□ 0
TRAPPC9-201ENST00000389328 SEC62Q99442 399 aaKnown RBP15.06■□□□□ 0
TRAPPC9-201ENST00000389328 ATF3P18847 181 aa15.06■□□□□ 0
TRAPPC9-201ENST00000389328 CDK5RAP3Q96JB5 506 aa15.06■□□□□ 0
TRAPPC9-201ENST00000389328 RASSF4Q9H2L5 321 aa15.06■□□□□ 0
TRAPPC9-201ENST00000389328 STRN4Q9NRL3 753 aa15.06■□□□□ 0
TRAPPC9-201ENST00000389328 IMPACTQ9P2X3 320 aa15.06■□□□□ 0
TRAPPC9-201ENST00000389328 CCDC196A0A1B0GTZ2 297 aa15.06■□□□□ 0
TRAPPC9-201ENST00000389328 OAS2P29728 719 aaKnown RBP15.06■□□□□ 0
TRAPPC9-201ENST00000389328 SPA17Q15506 151 aa15.06■□□□□ 0
TRAPPC9-201ENST00000389328 ATL3Q6DD88 541 aa15.06■□□□□ 0
TRAPPC9-201ENST00000389328 POGZQ7Z3K3 1410 aa15.05■□□□□ 0
TRAPPC9-201ENST00000389328 NCOA3Q9Y6Q9 1424 aa15.05■□□□□ 0
TRAPPC9-201ENST00000389328 KCNQ3O43525 872 aa15.05■□□□□ 0
TRAPPC9-201ENST00000389328 JADE2Q9NQC1 790 aa15.05■□□□□ 0
TRAPPC9-201ENST00000389328 CTAGE9A4FU28 777 aa15.05■□□□□ -0
TRAPPC9-201ENST00000389328 TOM1L2Q6ZVM7 507 aa15.05■□□□□ -0
TRAPPC9-201ENST00000389328 TMEM87AQ8NBN3 555 aa15.05■□□□□ -0
TRAPPC9-201ENST00000389328 ANKRD24Q8TF21 1146 aa15.05■□□□□ -0
TRAPPC9-201ENST00000389328 NLRP1Q9C000 1473 aa15.05■□□□□ -0
TRAPPC9-201ENST00000389328 IVLP07476 585 aa15.05■□□□□ -0
TRAPPC9-201ENST00000389328 GTF2A1P52655 376 aaPredicted RBP15.05■□□□□ -0
TRAPPC9-201ENST00000389328 SPECC1Q5M775 1068 aa15.05■□□□□ -0
TRAPPC9-201ENST00000389328 ANO1Q5XXA6 986 aa15.05■□□□□ -0
TRAPPC9-201ENST00000389328 BRAPQ7Z569 592 aa15.05■□□□□ -0
TRAPPC9-201ENST00000389328 IPO4Q8TEX9 1081 aaKnown RBP15.05■□□□□ -0
TRAPPC9-201ENST00000389328 LLPHQ9BRT6 129 aaKnown RBP15.05■□□□□ -0
TRAPPC9-201ENST00000389328 CWC25Q9NXE8 425 aaPredicted RBP15.05■□□□□ -0
TRAPPC9-201ENST00000389328 PROSER2Q86WR7 435 aaPredicted RBP15.04■□□□□ -0
TRAPPC9-201ENST00000389328 DHX58Q96C10 678 aa15.04■□□□□ -0
TRAPPC9-201ENST00000389328 ADCY10Q96PN6 1610 aa15.04■□□□□ -0
TRAPPC9-201ENST00000389328 TNNI3KQ59H18 835 aa15.04■□□□□ -0
TRAPPC9-201ENST00000389328 CEP112Q8N8E3 955 aa15.04■□□□□ -0
TRAPPC9-201ENST00000389328 FPGT-TNNI3KV9GXZ4 949 aa15.04■□□□□ -0
TRAPPC9-201ENST00000389328 NAA16Q6N069 864 aaPredicted RBP15.04■□□□□ -0
TRAPPC9-201ENST00000389328 LDHAL6AQ6ZMR3 332 aa15.04■□□□□ -0
TRAPPC9-201ENST00000389328 KIAA1468Q9P260 1216 aa15.04■□□□□ -0
TRAPPC9-201ENST00000389328 RNF113AO15541 343 aaKnown RBP15.04■□□□□ -0
TRAPPC9-201ENST00000389328 MCM3P25205 808 aa15.04■□□□□ -0
TRAPPC9-201ENST00000389328 ETF1P62495 437 aaKnown RBP15.04■□□□□ -0
TRAPPC9-201ENST00000389328 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.04■□□□□ -0
TRAPPC9-201ENST00000389328 CDC42BPAQ5VT25 1732 aa15.03■□□□□ -0
TRAPPC9-201ENST00000389328 SNRPA1P09661 255 aaKnown RBP15.03■□□□□ -0
TRAPPC9-201ENST00000389328 GPTP24298 496 aa15.03■□□□□ -0
TRAPPC9-201ENST00000389328 MAP4K1Q92918 833 aa15.03■□□□□ -0
TRAPPC9-201ENST00000389328 SPTLC3Q9NUV7 552 aa15.03■□□□□ -0
TRAPPC9-201ENST00000389328 RANBP6O60518 1105 aaKnown RBP15.03■□□□□ -0
TRAPPC9-201ENST00000389328 MTX1Q13505 466 aa15.03■□□□□ -0
TRAPPC9-201ENST00000389328 KANK3Q6NY19 840 aa15.03■□□□□ -0
TRAPPC9-201ENST00000389328 ENOX2Q16206 610 aaKnown RBP15.03■□□□□ -0
TRAPPC9-201ENST00000389328 GUCA1BQ9UMX6 200 aa15.03■□□□□ -0
TRAPPC9-201ENST00000389328 ELP1O95163 1332 aa15.02■□□□□ -0
TRAPPC9-201ENST00000389328 NLRP12P59046 1061 aa15.02■□□□□ -0
TRAPPC9-201ENST00000389328 PTPN21Q16825 1174 aa15.02■□□□□ -0
TRAPPC9-201ENST00000389328 RNF187Q5TA31 235 aaPredicted RBP15.02■□□□□ -0
TRAPPC9-201ENST00000389328 WDHD1O75717 1129 aaPredicted RBP15.02■□□□□ -0
TRAPPC9-201ENST00000389328 MNAT1P51948 309 aa15.02■□□□□ -0
TRAPPC9-201ENST00000389328 SMC1AQ14683 1233 aaKnown RBP15.02■□□□□ -0
TRAPPC9-201ENST00000389328 BEND3Q5T5X7 828 aa15.02■□□□□ -0
TRAPPC9-201ENST00000389328 RRAGBQ5VZM2 374 aa15.02■□□□□ -0
TRAPPC9-201ENST00000389328 FBXO38Q6PIJ6 1188 aa15.02■□□□□ -0
TRAPPC9-201ENST00000389328 CAPZA3Q96KX2 299 aa15.02■□□□□ -0
TRAPPC9-201ENST00000389328 ZHX3Q9H4I2 956 aa15.02■□□□□ -0
TRAPPC9-201ENST00000389328 EIF4A1P60842 406 aaKnown RBP15.02□□□□□ -0.01
TRAPPC9-201ENST00000389328 NFATC2IPQ8NCF5 419 aa15.02□□□□□ -0.01
TRAPPC9-201ENST00000389328 DRC1Q96MC2 740 aa15.02□□□□□ -0.01
TRAPPC9-201ENST00000389328 FAM107BQ9H098 131 aa15.02□□□□□ -0.01
TRAPPC9-201ENST00000389328 DDX21Q9NR30 783 aaKnown RBP eCLIP15.02□□□□□ -0.01
TRAPPC9-201ENST00000389328 SSBP05455 408 aaKnown RBP eCLIP15.02□□□□□ -0.01
TRAPPC9-201ENST00000389328 PI4K2BQ8TCG2 481 aa15.02□□□□□ -0.01
TRAPPC9-201ENST00000389328 IL15P40933 162 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC9-201ENST00000389328 CHMP4BP1P59074 171 aa15.01□□□□□ -0.01
TRAPPC9-201ENST00000389328 MAP3K12Q12852 859 aa15.01□□□□□ -0.01
TRAPPC9-201ENST00000389328 SLC9C2Q5TAH2 1124 aa15.01□□□□□ -0.01
TRAPPC9-201ENST00000389328 TLR7Q9NYK1 1049 aaKnown RBP15.01□□□□□ -0.01
TRAPPC9-201ENST00000389328 PCDHA7Q9UN72 937 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms