RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 SLC51AQ86UW1 340 aa5.58□□□□□ -1.52
RNU6-1040P-201ENST00000383974 ARMC10Q8N2F6 343 aa5.58□□□□□ -1.52
RNU6-1040P-201ENST00000383974 KLHL23Q8NBE8 558 aa5.58□□□□□ -1.52
RNU6-1040P-201ENST00000383974 EDEM1Q92611 657 aa5.58□□□□□ -1.52
RNU6-1040P-201ENST00000383974 POP1Q99575 1024 aaKnown RBP5.58□□□□□ -1.52
RNU6-1040P-201ENST00000383974 CNTN3Q9P232 1028 aa5.58□□□□□ -1.52
RNU6-1040P-201ENST00000383974 DDX3YO15523 660 aaKnown RBP5.57□□□□□ -1.52
RNU6-1040P-201ENST00000383974 CD97P48960 835 aa5.57□□□□□ -1.52
RNU6-1040P-201ENST00000383974 DUOXA2Q1HG44 320 aa5.57□□□□□ -1.52
RNU6-1040P-201ENST00000383974 UVSSAQ2YD98 709 aa5.57□□□□□ -1.52
RNU6-1040P-201ENST00000383974 HELQQ8TDG4 1101 aa5.57□□□□□ -1.52
RNU6-1040P-201ENST00000383974 UBASH3BQ8TF42 649 aa5.57□□□□□ -1.52
RNU6-1040P-201ENST00000383974 UTP4Q969X6 686 aaKnown RBP5.57□□□□□ -1.52
RNU6-1040P-201ENST00000383974 ADAM19Q9H013 955 aa5.57□□□□□ -1.52
RNU6-1040P-201ENST00000383974 STOML1Q9UBI4 398 aa5.57□□□□□ -1.52
RNU6-1040P-201ENST00000383974 A6NHS1 94 aa5.56□□□□□ -1.52
RNU6-1040P-201ENST00000383974 FAM177BA6PVY3 158 aa5.56□□□□□ -1.52
RNU6-1040P-201ENST00000383974 H3BRJ5 948 aa5.56□□□□□ -1.52
RNU6-1040P-201ENST00000383974 GSC2O15499 205 aa5.56□□□□□ -1.52
RNU6-1040P-201ENST00000383974 DHX15O43143 795 aaKnown RBP5.56□□□□□ -1.52
RNU6-1040P-201ENST00000383974 TGFB1P01137 390 aa5.56□□□□□ -1.52
RNU6-1040P-201ENST00000383974 IGLV1-40P01703 118 aa5.56□□□□□ -1.52
RNU6-1040P-201ENST00000383974 DNM1Q05193 864 aaKnown RBP5.56□□□□□ -1.52
RNU6-1040P-201ENST00000383974 C1orf127Q8N9H9 656 aa5.56□□□□□ -1.52
RNU6-1040P-201ENST00000383974 KLHDC7BQ96G42 594 aa5.56□□□□□ -1.52
RNU6-1040P-201ENST00000383974 FAM46AQ96IP4 442 aaKnown RBP5.56□□□□□ -1.52
RNU6-1040P-201ENST00000383974 ZMYND15Q9H091 742 aa5.56□□□□□ -1.52
RNU6-1040P-201ENST00000383974 SEC31BQ9NQW1 1179 aa5.56□□□□□ -1.52
RNU6-1040P-201ENST00000383974 SALL4Q9UJQ4 1053 aa5.56□□□□□ -1.52
RNU6-1040P-201ENST00000383974 PDGFAP04085 211 aa5.55□□□□□ -1.52
RNU6-1040P-201ENST00000383974 RPLP1P05386 114 aaKnown RBP5.55□□□□□ -1.52
RNU6-1040P-201ENST00000383974 MPSTP25325 297 aa5.55□□□□□ -1.52
RNU6-1040P-201ENST00000383974 MYRFLQ96LU7 910 aa5.55□□□□□ -1.52
RNU6-1040P-201ENST00000383974 HHIPQ96QV1 700 aa5.55□□□□□ -1.52
RNU6-1040P-201ENST00000383974 CHRDQ9H2X0 955 aa5.55□□□□□ -1.52
RNU6-1040P-201ENST00000383974 GGNBP2Q9H3C7 697 aa5.55□□□□□ -1.52
RNU6-1040P-201ENST00000383974 DZANK1Q9NVP4 752 aa5.55□□□□□ -1.52
RNU6-1040P-201ENST00000383974 SERPINA10Q9UK55 444 aa5.55□□□□□ -1.52
RNU6-1040P-201ENST00000383974 ARID3CA6NKF2 412 aa5.54□□□□□ -1.52
RNU6-1040P-201ENST00000383974 NFKBIEO00221 500 aa5.54□□□□□ -1.52
RNU6-1040P-201ENST00000383974 TRPA1O75762 1119 aa5.54□□□□□ -1.52
RNU6-1040P-201ENST00000383974 MED26O95402 600 aa5.54□□□□□ -1.52
RNU6-1040P-201ENST00000383974 CES1P23141 567 aa5.54□□□□□ -1.52
RNU6-1040P-201ENST00000383974 CABP4P57796 275 aa5.54□□□□□ -1.52
RNU6-1040P-201ENST00000383974 NLRP12P59046 1061 aa5.54□□□□□ -1.52
RNU6-1040P-201ENST00000383974 PIP4K2BP78356 416 aa5.54□□□□□ -1.52
RNU6-1040P-201ENST00000383974 NFIAQ12857 509 aa5.54□□□□□ -1.52
RNU6-1040P-201ENST00000383974 C8orf34Q49A92 452 aa5.54□□□□□ -1.52
RNU6-1040P-201ENST00000383974 XKR5Q6UX68 686 aa5.54□□□□□ -1.52
RNU6-1040P-201ENST00000383974 TRIM42Q8IWZ5 723 aa5.54□□□□□ -1.52
RNU6-1040P-201ENST00000383974 SLC7A3Q8WY07 619 aa5.54□□□□□ -1.52
RNU6-1040P-201ENST00000383974 KRTAP4-12Q9BQ66 201 aa5.54□□□□□ -1.52
RNU6-1040P-201ENST00000383974 C7orf69Q9H7B7 122 aa5.54□□□□□ -1.52
RNU6-1040P-201ENST00000383974 HMX2A2RU54 273 aa5.53□□□□□ -1.52
RNU6-1040P-201ENST00000383974 KIAA1324LA8MWY0 1029 aaPredicted RBP5.53□□□□□ -1.52
RNU6-1040P-201ENST00000383974 PDE2AO00408 941 aaPredicted RBP5.53□□□□□ -1.52
RNU6-1040P-201ENST00000383974 PCSK2P16519 638 aa5.53□□□□□ -1.52
RNU6-1040P-201ENST00000383974 MZF1P28698 734 aaPredicted RBP5.53□□□□□ -1.52
RNU6-1040P-201ENST00000383974 EIF1AXP47813 144 aaKnown RBP5.53□□□□□ -1.52
RNU6-1040P-201ENST00000383974 PREPP48147 710 aa5.53□□□□□ -1.52
RNU6-1040P-201ENST00000383974 MTMR3Q13615 1198 aa5.53□□□□□ -1.52
RNU6-1040P-201ENST00000383974 NOM1Q5C9Z4 860 aaKnown RBP5.53□□□□□ -1.52
RNU6-1040P-201ENST00000383974 MCTP1Q6DN14 999 aa5.53□□□□□ -1.52
RNU6-1040P-201ENST00000383974 ZDHHC13Q8IUH4 622 aa5.53□□□□□ -1.52
RNU6-1040P-201ENST00000383974 GTF3C2Q8WUA4 911 aaPredicted RBP5.53□□□□□ -1.52
RNU6-1040P-201ENST00000383974 WNT8BQ93098 351 aa5.53□□□□□ -1.52
RNU6-1040P-201ENST00000383974 SOX13Q9UN79 622 aa5.53□□□□□ -1.52
RNU6-1040P-201ENST00000383974 COBLO75128 1261 aa5.52□□□□□ -1.53
RNU6-1040P-201ENST00000383974 ANKRD34AQ69YU3 496 aa5.52□□□□□ -1.53
RNU6-1040P-201ENST00000383974 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.52□□□□□ -1.53
RNU6-1040P-201ENST00000383974 KRTAP1-3Q8IUG1 177 aa5.52□□□□□ -1.53
RNU6-1040P-201ENST00000383974 FAM20CQ8IXL6 584 aa5.52□□□□□ -1.53
RNU6-1040P-201ENST00000383974 DBNDD2Q9BQY9 259 aa5.52□□□□□ -1.53
RNU6-1040P-201ENST00000383974 RNF208Q9H0X6 261 aa5.52□□□□□ -1.53
RNU6-1040P-201ENST00000383974 OSGEPQ9NPF4 335 aa5.52□□□□□ -1.53
RNU6-1040P-201ENST00000383974 POLIQ9UNA4 740 aa5.52□□□□□ -1.53
RNU6-1040P-201ENST00000383974 TMEM88BA6NKF7 163 aa5.51□□□□□ -1.53
RNU6-1040P-201ENST00000383974 EREGO14944 169 aa5.51□□□□□ -1.53
RNU6-1040P-201ENST00000383974 SART1O43290 800 aaKnown RBP5.51□□□□□ -1.53
RNU6-1040P-201ENST00000383974 HGSNATQ68CP4 663 aa5.51□□□□□ -1.53
RNU6-1040P-201ENST00000383974 RNF43Q68DV7 783 aa5.51□□□□□ -1.53
RNU6-1040P-201ENST00000383974 TMEM102Q8N9M5 508 aaPredicted RBP5.51□□□□□ -1.53
RNU6-1040P-201ENST00000383974 TTC16Q8NEE8 873 aa5.51□□□□□ -1.53
RNU6-1040P-201ENST00000383974 ZKSCAN3Q9BRR0 538 aa5.51□□□□□ -1.53
RNU6-1040P-201ENST00000383974 KCNF1Q9H3M0 494 aa5.51□□□□□ -1.53
RNU6-1040P-201ENST00000383974 BMP3P12645 472 aa5.5□□□□□ -1.53
RNU6-1040P-201ENST00000383974 SSFA2P28290 1259 aa5.5□□□□□ -1.53
RNU6-1040P-201ENST00000383974 LCE3BQ5TA77 95 aa5.5□□□□□ -1.53
RNU6-1040P-201ENST00000383974 FDX2Q6P4F2 183 aa5.5□□□□□ -1.53
RNU6-1040P-201ENST00000383974 BEND4Q6ZU67 534 aa5.5□□□□□ -1.53
RNU6-1040P-201ENST00000383974 CLEC10AQ8IUN9 316 aa5.5□□□□□ -1.53
RNU6-1040P-201ENST00000383974 OSMRQ99650 979 aa5.5□□□□□ -1.53
RNU6-1040P-201ENST00000383974 FAM83CQ9BQN1 747 aa5.5□□□□□ -1.53
RNU6-1040P-201ENST00000383974 RUSC1Q9BVN2 902 aa5.5□□□□□ -1.53
RNU6-1040P-201ENST00000383974 PRR19A6NJB7 356 aa5.49□□□□□ -1.53
RNU6-1040P-201ENST00000383974 PHACTR2O75167 634 aa5.49□□□□□ -1.53
RNU6-1040P-201ENST00000383974 TNFRSF21O75509 655 aa5.49□□□□□ -1.53
RNU6-1040P-201ENST00000383974 SPINK2P20155 84 aa5.49□□□□□ -1.53
RNU6-1040P-201ENST00000383974 C19orf57Q0VDD7 668 aa5.49□□□□□ -1.53
RNU6-1040P-201ENST00000383974 ALKBH2Q6NS38 261 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms