RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 BMS1Q14692 1282 aaKnown RBP12.93□□□□□ -0.34
RPGR-203ENST00000378505 CCDC40Q4G0X9 1142 aa12.93□□□□□ -0.34
RPGR-203ENST00000378505 LUZP1Q86V48 1076 aa12.93□□□□□ -0.34
RPGR-203ENST00000378505 DZIP3Q86Y13 1208 aaKnown RBP12.93□□□□□ -0.34
RPGR-203ENST00000378505 UTP14AQ9BVJ6 771 aaKnown RBP12.93□□□□□ -0.34
RPGR-203ENST00000378505 TIMM10P62072 90 aa12.92□□□□□ -0.34
RPGR-203ENST00000378505 PKNOX2Q96KN3 472 aa12.92□□□□□ -0.34
RPGR-203ENST00000378505 ADGBQ8N7X0 1667 aa12.92□□□□□ -0.34
RPGR-203ENST00000378505 ATP6V1AP38606 617 aa12.92□□□□□ -0.34
RPGR-203ENST00000378505 TNNI3KQ59H18 835 aa12.92□□□□□ -0.34
RPGR-203ENST00000378505 FPGT-TNNI3KV9GXZ4 949 aa12.92□□□□□ -0.34
RPGR-203ENST00000378505 SLC27A2O14975 620 aa12.92□□□□□ -0.34
RPGR-203ENST00000378505 RRAGBQ5VZM2 374 aa12.92□□□□□ -0.34
RPGR-203ENST00000378505 PLXNC1O60486 1568 aa12.92□□□□□ -0.34
RPGR-203ENST00000378505 CALM1P0DP23 149 aa12.92□□□□□ -0.34
RPGR-203ENST00000378505 CALM2P0DP24 149 aa12.92□□□□□ -0.34
RPGR-203ENST00000378505 CALM3P0DP25 149 aa12.92□□□□□ -0.34
RPGR-203ENST00000378505 CETN2P41208 172 aa12.92□□□□□ -0.34
RPGR-203ENST00000378505 ENOX2Q16206 610 aaKnown RBP12.92□□□□□ -0.34
RPGR-203ENST00000378505 TAX1BP1Q86VP1 789 aa12.92□□□□□ -0.34
RPGR-203ENST00000378505 ALS2CR12Q96Q35 445 aa12.92□□□□□ -0.34
RPGR-203ENST00000378505 DBNDD2Q9BQY9 259 aa12.92□□□□□ -0.34
RPGR-203ENST00000378505 RBSNQ9H1K0 784 aa12.92□□□□□ -0.34
RPGR-203ENST00000378505 TMX1Q9H3N1 280 aa12.92□□□□□ -0.34
RPGR-203ENST00000378505 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.92□□□□□ -0.34
RPGR-203ENST00000378505 RFC4P35249 363 aa12.91□□□□□ -0.34
RPGR-203ENST00000378505 ZNF445P59923 1031 aa12.91□□□□□ -0.34
RPGR-203ENST00000378505 SEPT7Q16181 437 aaKnown RBP12.91□□□□□ -0.34
RPGR-203ENST00000378505 TAF3Q5VWG9 929 aa12.91□□□□□ -0.34
RPGR-203ENST00000378505 ZNF521Q96K83 1311 aa12.91□□□□□ -0.34
RPGR-203ENST00000378505 HLA-DOAP06340 250 aa12.91□□□□□ -0.34
RPGR-203ENST00000378505 POTEJP0CG39 1038 aa12.91□□□□□ -0.34
RPGR-203ENST00000378505 EHBP1Q8NDI1 1231 aa12.91□□□□□ -0.34
RPGR-203ENST00000378505 SETDB2Q96T68 719 aa12.91□□□□□ -0.34
RPGR-203ENST00000378505 CEP170Q5SW79 1584 aa12.91□□□□□ -0.34
RPGR-203ENST00000378505 CALML3P27482 149 aa12.91□□□□□ -0.34
RPGR-203ENST00000378505 HELBQ8NG08 1087 aaPredicted RBP12.91□□□□□ -0.34
RPGR-203ENST00000378505 CNKSR2Q8WXI2 1034 aa12.91□□□□□ -0.34
RPGR-203ENST00000378505 DNAI1Q9UI46 699 aa12.91□□□□□ -0.34
RPGR-203ENST00000378505 A0A1B0GUL7 405 aa12.9□□□□□ -0.34
RPGR-203ENST00000378505 GOLGA6L7A0A1B0GV03 622 aa12.9□□□□□ -0.34
RPGR-203ENST00000378505 TSPY3P0CV98 308 aa12.9□□□□□ -0.34
RPGR-203ENST00000378505 TSPY8P0CW00 308 aa12.9□□□□□ -0.34
RPGR-203ENST00000378505 LLPHQ9BRT6 129 aaKnown RBP12.9□□□□□ -0.34
RPGR-203ENST00000378505 PRDM10Q9NQV6 1147 aa12.9□□□□□ -0.34
RPGR-203ENST00000378505 PCDH11XQ9BZA7 1347 aa12.9□□□□□ -0.34
RPGR-203ENST00000378505 PCDH11YQ9BZA8 1340 aa12.9□□□□□ -0.34
RPGR-203ENST00000378505 POLR3GO15318 223 aaPredicted RBP12.9□□□□□ -0.34
RPGR-203ENST00000378505 STAT6P42226 847 aa12.9□□□□□ -0.34
RPGR-203ENST00000378505 EXOC1Q9NV70 894 aa12.9□□□□□ -0.34
RPGR-203ENST00000378505 ARHGEF10O15013 1369 aa12.9□□□□□ -0.34
RPGR-203ENST00000378505 MAGEB6P1A0A0J9YX57 407 aa12.9□□□□□ -0.34
RPGR-203ENST00000378505 AKR1B10O60218 316 aa12.9□□□□□ -0.34
RPGR-203ENST00000378505 TRIM21P19474 475 aaKnown RBP12.9□□□□□ -0.34
RPGR-203ENST00000378505 HSPA4P34932 840 aa12.9□□□□□ -0.34
RPGR-203ENST00000378505 DDB1Q16531 1140 aa12.9□□□□□ -0.34
RPGR-203ENST00000378505 PSMA7O14818 248 aa12.9□□□□□ -0.34
RPGR-203ENST00000378505 EIF4A1P60842 406 aaKnown RBP12.9□□□□□ -0.34
RPGR-203ENST00000378505 HSP90AA4PQ58FG1 418 aa12.9□□□□□ -0.34
RPGR-203ENST00000378505 NAA15Q9BXJ9 866 aaKnown RBP12.9□□□□□ -0.34
RPGR-203ENST00000378505 PTGS1P23219 599 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 FAM160A1Q05DH4 1040 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 CETN1Q12798 172 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 FAM227BQ96M60 508 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 EHMT1Q9H9B1 1298 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 TCERG1LQ5VWI1 586 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 KLHDC4Q8TBB5 520 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.89□□□□□ -0.35
RPGR-203ENST00000378505 TM6SF1Q9BZW5 370 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 RTL9Q8NET4 1388 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 USP8P40818 1118 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 DNA2P51530 1060 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 SLC4A8Q2Y0W8 1093 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 MAGEB6Q8N7X4 407 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 KBTBD3Q8NAB2 608 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 SSH3Q8TE77 659 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 SUCLG2Q96I99 432 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 PHF23Q9BUL5 403 aaPredicted RBP12.89□□□□□ -0.35
RPGR-203ENST00000378505 USP44Q9H0E7 712 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.89□□□□□ -0.35
RPGR-203ENST00000378505 GCKRQ14397 625 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 DHX58Q96C10 678 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 SRRTQ9BXP5 876 aaKnown RBP12.89□□□□□ -0.35
RPGR-203ENST00000378505 ZSWIM4Q9H7M6 989 aa12.89□□□□□ -0.35
RPGR-203ENST00000378505 CYLC1P35663 651 aaPredicted RBP12.88□□□□□ -0.35
RPGR-203ENST00000378505 MATR3P43243 847 aaKnown RBP eCLIP12.88□□□□□ -0.35
RPGR-203ENST00000378505 SHTN1A0MZ66 631 aa12.88□□□□□ -0.35
RPGR-203ENST00000378505 FAM89AQ96GI7 184 aa12.88□□□□□ -0.35
RPGR-203ENST00000378505 PLEKHF1Q96S99 279 aa12.88□□□□□ -0.35
RPGR-203ENST00000378505 CABP5Q9NP86 173 aa12.88□□□□□ -0.35
RPGR-203ENST00000378505 LMBRD1Q9NUN5 540 aa12.88□□□□□ -0.35
RPGR-203ENST00000378505 KDM5AP29375 1690 aaKnown RBP12.88□□□□□ -0.35
RPGR-203ENST00000378505 GSPT1P15170 499 aaKnown RBP12.88□□□□□ -0.35
RPGR-203ENST00000378505 SSR1P43307 286 aaKnown RBP12.88□□□□□ -0.35
RPGR-203ENST00000378505 CCDC129Q6ZRS4 1044 aa12.88□□□□□ -0.35
RPGR-203ENST00000378505 ACSBG1Q96GR2 724 aa12.88□□□□□ -0.35
RPGR-203ENST00000378505 CFAP65Q6ZU64 1925 aaKnown RBP12.88□□□□□ -0.35
RPGR-203ENST00000378505 KDM5CP41229 1560 aa12.88□□□□□ -0.35
RPGR-203ENST00000378505 SLU7O95391 586 aaKnown RBP12.88□□□□□ -0.35
RPGR-203ENST00000378505 STXBP4Q6ZWJ1 553 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms