RNA–Protein interactions for RNA: ENST00000377475.7

SEC23B-204, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-204ENST00000377475 EPC1Q9H2F5 836 aa13.46□□□□□ -0.25
SEC23B-204ENST00000377475 PTPRUQ92729 1446 aa13.46□□□□□ -0.25
SEC23B-204ENST00000377475 SLC3A2P08195 630 aaKnown RBP13.46□□□□□ -0.25
SEC23B-204ENST00000377475 MNS1Q8NEH6 495 aa13.46□□□□□ -0.25
SEC23B-204ENST00000377475 NUP133Q8WUM0 1156 aa13.46□□□□□ -0.25
SEC23B-204ENST00000377475 NAT10Q9H0A0 1025 aaKnown RBP13.46□□□□□ -0.25
SEC23B-204ENST00000377475 CDC42BPGQ6DT37 1551 aa13.46□□□□□ -0.25
SEC23B-204ENST00000377475 A0A1B0GUL7 405 aa13.46□□□□□ -0.26
SEC23B-204ENST00000377475 E7EWF7 191 aa13.46□□□□□ -0.26
SEC23B-204ENST00000377475 TPM4P67936 248 aa13.46□□□□□ -0.26
SEC23B-204ENST00000377475 ERCC6LQ2NKX8 1250 aa13.46□□□□□ -0.26
SEC23B-204ENST00000377475 LRRC8AQ8IWT6 810 aa13.46□□□□□ -0.26
SEC23B-204ENST00000377475 SYNE4Q8N205 404 aa13.46□□□□□ -0.26
SEC23B-204ENST00000377475 XPO4Q9C0E2 1151 aaKnown RBP13.46□□□□□ -0.26
SEC23B-204ENST00000377475 DENND2AQ9ULE3 1009 aa13.46□□□□□ -0.26
SEC23B-204ENST00000377475 ADORA1P30542 326 aa13.45□□□□□ -0.26
SEC23B-204ENST00000377475 RESTQ13127 1097 aa13.45□□□□□ -0.26
SEC23B-204ENST00000377475 SNW1Q13573 536 aaKnown RBP13.45□□□□□ -0.26
SEC23B-204ENST00000377475 TOM1L2Q6ZVM7 507 aa13.45□□□□□ -0.26
SEC23B-204ENST00000377475 SMAP1Q8IYB5 467 aaPredicted RBP13.45□□□□□ -0.26
SEC23B-204ENST00000377475 KIF18AQ8NI77 898 aa13.45□□□□□ -0.26
SEC23B-204ENST00000377475 PCDHA7Q9UN72 937 aa13.45□□□□□ -0.26
SEC23B-204ENST00000377475 CLTCQ00610 1675 aaKnown RBP13.45□□□□□ -0.26
SEC23B-204ENST00000377475 SNAP23O00161 211 aa13.45□□□□□ -0.26
SEC23B-204ENST00000377475 COBLO75128 1261 aa13.45□□□□□ -0.26
SEC23B-204ENST00000377475 ADD1P35611 737 aaKnown RBP13.45□□□□□ -0.26
SEC23B-204ENST00000377475 ANKLE2Q86XL3 938 aa13.45□□□□□ -0.26
SEC23B-204ENST00000377475 NSUN7Q8NE18 718 aaKnown RBP13.45□□□□□ -0.26
SEC23B-204ENST00000377475 METTL22Q9BUU2 404 aaPredicted RBP13.45□□□□□ -0.26
SEC23B-204ENST00000377475 HMG20BQ9P0W2 317 aa13.45□□□□□ -0.26
SEC23B-204ENST00000377475 PRC1O43663 620 aa13.45□□□□□ -0.26
SEC23B-204ENST00000377475 ATP1A3P13637 1013 aa13.45□□□□□ -0.26
SEC23B-204ENST00000377475 CCDC158Q5M9N0 1113 aa13.45□□□□□ -0.26
SEC23B-204ENST00000377475 CNNM1Q9NRU3 951 aa13.45□□□□□ -0.26
SEC23B-204ENST00000377475 KDRP35968 1356 aa13.45□□□□□ -0.26
SEC23B-204ENST00000377475 hCG_1642624A0A1W2PR95 340 aa13.44□□□□□ -0.26
SEC23B-204ENST00000377475 ZBTB22O15209 634 aa13.44□□□□□ -0.26
SEC23B-204ENST00000377475 SNRPA1P09661 255 aaKnown RBP13.44□□□□□ -0.26
SEC23B-204ENST00000377475 ZNF827Q17R98 1081 aa13.44□□□□□ -0.26
SEC23B-204ENST00000377475 MRPS27Q92552 414 aaKnown RBP13.44□□□□□ -0.26
SEC23B-204ENST00000377475 CLIC6Q96NY7 704 aa13.44□□□□□ -0.26
SEC23B-204ENST00000377475 HSPD1P10809 573 aaKnown RBP13.44□□□□□ -0.26
SEC23B-204ENST00000377475 SMTNL1A8MU46 457 aa13.44□□□□□ -0.26
SEC23B-204ENST00000377475 ZSCAN20P17040 1043 aaPredicted RBP13.44□□□□□ -0.26
SEC23B-204ENST00000377475 SIRT1Q96EB6 747 aa13.44□□□□□ -0.26
SEC23B-204ENST00000377475 ZSCAN16Q9H4T2 348 aaPredicted RBP13.44□□□□□ -0.26
SEC23B-204ENST00000377475 USP31Q70CQ4 1352 aa13.43□□□□□ -0.26
SEC23B-204ENST00000377475 ADAMTS13Q76LX8 1427 aa13.43□□□□□ -0.26
SEC23B-204ENST00000377475 UBE2Q2LH0YL09 131 aa13.43□□□□□ -0.26
SEC23B-204ENST00000377475 IMMTQ16891 758 aaKnown RBP13.43□□□□□ -0.26
SEC23B-204ENST00000377475 UTP14AQ9BVJ6 771 aaKnown RBP13.43□□□□□ -0.26
SEC23B-204ENST00000377475 SPTLC3Q9NUV7 552 aa13.43□□□□□ -0.26
SEC23B-204ENST00000377475 KBTBD3Q8NAB2 608 aa13.43□□□□□ -0.26
SEC23B-204ENST00000377475 PRDM4Q9UKN5 801 aa13.43□□□□□ -0.26
SEC23B-204ENST00000377475 ZNF213O14771 459 aa13.42□□□□□ -0.26
SEC23B-204ENST00000377475 SPTLC2O15270 562 aa13.42□□□□□ -0.26
SEC23B-204ENST00000377475 TRIM29Q14134 588 aa13.42□□□□□ -0.26
SEC23B-204ENST00000377475 METTL24Q5JXM2 366 aa13.42□□□□□ -0.26
SEC23B-204ENST00000377475 TULP1O00294 542 aaPredicted RBP13.42□□□□□ -0.26
SEC23B-204ENST00000377475 ATP5JP18859 108 aa13.42□□□□□ -0.26
SEC23B-204ENST00000377475 PDIA3P30101 505 aaKnown RBP13.42□□□□□ -0.26
SEC23B-204ENST00000377475 FAM160A1Q05DH4 1040 aa13.42□□□□□ -0.26
SEC23B-204ENST00000377475 TEX35Q5T0J7 233 aa13.42□□□□□ -0.26
SEC23B-204ENST00000377475 TRMT44Q8IYL2 757 aaKnown RBP13.42□□□□□ -0.26
SEC23B-204ENST00000377475 RNF216Q9NWF9 866 aaPredicted RBP13.42□□□□□ -0.26
SEC23B-204ENST00000377475 M0R2C6 588 aa13.42□□□□□ -0.26
SEC23B-204ENST00000377475 ZAP70P43403 619 aa13.42□□□□□ -0.26
SEC23B-204ENST00000377475 SLC52A2Q9HAB3 445 aa13.42□□□□□ -0.26
SEC23B-204ENST00000377475 STX17P56962 302 aa13.41□□□□□ -0.26
SEC23B-204ENST00000377475 PNOCQ13519 176 aa13.41□□□□□ -0.26
SEC23B-204ENST00000377475 KARSQ15046 597 aaKnown RBP13.41□□□□□ -0.26
SEC23B-204ENST00000377475 IFNL2Q8IZJ0 200 aa13.41□□□□□ -0.26
SEC23B-204ENST00000377475 OSBP2Q969R2 916 aa13.41□□□□□ -0.26
SEC23B-204ENST00000377475 NRKQ7Z2Y5 1582 aa13.41□□□□□ -0.26
SEC23B-204ENST00000377475 TDRD7Q8NHU6 1098 aaKnown RBP13.41□□□□□ -0.26
SEC23B-204ENST00000377475 CCDC34Q96HJ3 373 aa13.41□□□□□ -0.26
SEC23B-204ENST00000377475 DIP2BQ9P265 1576 aa13.41□□□□□ -0.26
SEC23B-204ENST00000377475 B4E1Z4 1266 aa13.41□□□□□ -0.26
SEC23B-204ENST00000377475 CTDNEP1O95476 244 aa13.41□□□□□ -0.26
SEC23B-204ENST00000377475 EVA1CP58658 441 aa13.41□□□□□ -0.26
SEC23B-204ENST00000377475 ARHGAP29Q52LW3 1261 aa13.41□□□□□ -0.26
SEC23B-204ENST00000377475 GPIHBP1Q8IV16 184 aa13.41□□□□□ -0.26
SEC23B-204ENST00000377475 STAMQ92783 540 aa13.41□□□□□ -0.26
SEC23B-204ENST00000377475 ALG1Q9BT22 464 aa13.41□□□□□ -0.26
SEC23B-204ENST00000377475 SLC26A6Q9BXS9 759 aa13.41□□□□□ -0.26
SEC23B-204ENST00000377475 CWC25Q9NXE8 425 aaPredicted RBP13.41□□□□□ -0.26
SEC23B-204ENST00000377475 ZNF202O95125 648 aa13.4□□□□□ -0.26
SEC23B-204ENST00000377475 UBASH3AP57075 661 aa13.4□□□□□ -0.26
SEC23B-204ENST00000377475 PDIA6Q15084 440 aa13.4□□□□□ -0.26
SEC23B-204ENST00000377475 SLC9C2Q5TAH2 1124 aa13.4□□□□□ -0.26
SEC23B-204ENST00000377475 LRRN4CLQ8ND94 238 aa13.4□□□□□ -0.26
SEC23B-204ENST00000377475 ATF3P18847 181 aa13.4□□□□□ -0.26
SEC23B-204ENST00000377475 GTF2F1P35269 517 aaKnown RBP eCLIP13.4□□□□□ -0.26
SEC23B-204ENST00000377475 SYKP43405 635 aa13.4□□□□□ -0.26
SEC23B-204ENST00000377475 LDHAL6AQ6ZMR3 332 aa13.4□□□□□ -0.26
SEC23B-204ENST00000377475 UBXN4Q92575 508 aa13.4□□□□□ -0.26
SEC23B-204ENST00000377475 FGAP02671 866 aa13.39□□□□□ -0.27
SEC23B-204ENST00000377475 DMTNQ08495 405 aa13.39□□□□□ -0.27
SEC23B-204ENST00000377475 SCARF1Q14162 830 aa13.39□□□□□ -0.27
SEC23B-204ENST00000377475 ARHGEF25Q86VW2 580 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms