RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 ARID5BQ14865 1188 aa21.27■■□□□ 1
SF1-203ENST00000377387 BCL2L12Q9HB09 334 aa21.27■■□□□ 1
SF1-203ENST00000377387 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.27■■□□□ 11e-10■■■□□ 15.6
SF1-203ENST00000377387 CCDC144BQ3MJ40 725 aa21.27■■□□□ 1
SF1-203ENST00000377387 CCDC144CPQ8IYA2 1237 aa21.27■■□□□ 1
SF1-203ENST00000377387 STRN4Q9NRL3 753 aa21.27■■□□□ 1
SF1-203ENST00000377387 SH3TC1Q8TE82 1336 aa21.27■□□□□ 0.99
SF1-203ENST00000377387 AFDNP55196 1824 aaKnown RBP21.27■□□□□ 0.99
SF1-203ENST00000377387 ZMYM1Q5SVZ6 1142 aa21.26■□□□□ 0.99
SF1-203ENST00000377387 RBM43Q6ZSC3 357 aaKnown RBP21.26■□□□□ 0.99
SF1-203ENST00000377387 OSBP2Q969R2 916 aa21.26■□□□□ 0.99
SF1-203ENST00000377387 EYA2O00167 538 aa21.26■□□□□ 0.99
SF1-203ENST00000377387 POLR3DP05423 398 aaPredicted RBP21.26■□□□□ 0.99
SF1-203ENST00000377387 HMGB1P09429 215 aaKnown RBP21.26■□□□□ 0.99
SF1-203ENST00000377387 PDIA3P30101 505 aaKnown RBP21.26■□□□□ 0.99
SF1-203ENST00000377387 ADORA1P30542 326 aa21.26■□□□□ 0.99
SF1-203ENST00000377387 ZSCAN25Q6NSZ9 544 aa21.26■□□□□ 0.99
SF1-203ENST00000377387 CCDC73Q6ZRK6 1079 aa21.26■□□□□ 0.99
SF1-203ENST00000377387 TDRD7Q8NHU6 1098 aaKnown RBP21.26■□□□□ 0.99
SF1-203ENST00000377387 HELLSQ9NRZ9 838 aa21.26■□□□□ 0.99
SF1-203ENST00000377387 GJB4Q9NTQ9 266 aa21.26■□□□□ 0.99
SF1-203ENST00000377387 MRC1P22897 1456 aa21.26■□□□□ 0.99
SF1-203ENST00000377387 IL15P40933 162 aaPredicted RBP21.25■□□□□ 0.99
SF1-203ENST00000377387 EXOSC10Q01780 885 aaKnown RBP21.25■□□□□ 0.99
SF1-203ENST00000377387 TOM1L2Q6ZVM7 507 aa21.25■□□□□ 0.99
SF1-203ENST00000377387 CACTINQ8WUQ7 758 aaKnown RBP21.25■□□□□ 0.99
SF1-203ENST00000377387 SCN11AQ9UI33 1791 aa21.25■□□□□ 0.99
SF1-203ENST00000377387 RNF113AO15541 343 aaKnown RBP21.25■□□□□ 0.99
SF1-203ENST00000377387 PLA2G4DQ86XP0 818 aa21.25■□□□□ 0.99
SF1-203ENST00000377387 FSIP1Q8NA03 581 aa21.25■□□□□ 0.99
SF1-203ENST00000377387 BECN2A8MW95 431 aa21.25■□□□□ 0.99
SF1-203ENST00000377387 PI16Q6UXB8 463 aa21.25■□□□□ 0.99
SF1-203ENST00000377387 DSCC1Q9BVC3 393 aa21.25■□□□□ 0.99
SF1-203ENST00000377387 PRDM11Q9NQV5 511 aa21.25■□□□□ 0.99
SF1-203ENST00000377387 KINO60870 393 aaKnown RBP21.24■□□□□ 0.99
SF1-203ENST00000377387 MTERF4Q7Z6M4 381 aaKnown RBP21.24■□□□□ 0.99
SF1-203ENST00000377387 ZNF592Q92610 1267 aa21.24■□□□□ 0.99
SF1-203ENST00000377387 CEP126Q9P2H0 1117 aa21.24■□□□□ 0.99
SF1-203ENST00000377387 FILIP1Q7Z7B0 1213 aa21.24■□□□□ 0.99
SF1-203ENST00000377387 LLPHQ9BRT6 129 aaKnown RBP21.24■□□□□ 0.99
SF1-203ENST00000377387 RCOR1Q9UKL0 485 aa21.24■□□□□ 0.99
SF1-203ENST00000377387 A0A1B0GVL5 298 aa21.23■□□□□ 0.99
SF1-203ENST00000377387 TTC39AQ5SRH9 613 aa21.22■□□□□ 0.99
SF1-203ENST00000377387 NAA16Q6N069 864 aaPredicted RBP21.22■□□□□ 0.99
SF1-203ENST00000377387 CBX1P83916 185 aa21.22■□□□□ 0.99
SF1-203ENST00000377387 SCARF1Q14162 830 aa21.22■□□□□ 0.99
SF1-203ENST00000377387 ILDR1Q86SU0 546 aaPredicted RBP21.22■□□□□ 0.99
SF1-203ENST00000377387 FAM89AQ96GI7 184 aa21.22■□□□□ 0.99
SF1-203ENST00000377387 SNW1Q13573 536 aaKnown RBP21.22■□□□□ 0.99
SF1-203ENST00000377387 IQCB1Q15051 598 aa21.22■□□□□ 0.99
SF1-203ENST00000377387 CCDC57Q2TAC2 916 aa21.22■□□□□ 0.99
SF1-203ENST00000377387 TAF7LQ5H9L4 462 aa21.22■□□□□ 0.99
SF1-203ENST00000377387 PPP4R3BQ5MIZ7 849 aa21.22■□□□□ 0.99
SF1-203ENST00000377387 SDF4Q9BRK5 362 aa21.22■□□□□ 0.99
SF1-203ENST00000377387 GTF2F1P35269 517 aaKnown RBP eCLIP21.21■□□□□ 0.99
SF1-203ENST00000377387 TPD52L1Q16890 204 aaPredicted RBP21.21■□□□□ 0.99
SF1-203ENST00000377387 ZNF396Q96N95 335 aaPredicted RBP21.21■□□□□ 0.99
SF1-203ENST00000377387 TNNT1P13805 278 aa21.21■□□□□ 0.99
SF1-203ENST00000377387 FDPSP14324 419 aaKnown RBP21.21■□□□□ 0.99
SF1-203ENST00000377387 SF3A1Q15459 793 aaKnown RBP21.21■□□□□ 0.99
SF1-203ENST00000377387 SYNE4Q8N205 404 aa21.21■□□□□ 0.99
SF1-203ENST00000377387 ZCRB1Q8TBF4 217 aaKnown RBP21.21■□□□□ 0.99
SF1-203ENST00000377387 KAT6BQ8WYB5 2073 aa21.2■□□□□ 0.99
SF1-203ENST00000377387 PALLDQ8WX93 1383 aa21.2■□□□□ 0.98
SF1-203ENST00000377387 SPDYE4A6NLX3 237 aa21.2■□□□□ 0.98
SF1-203ENST00000377387 STX1AQ16623 288 aa21.2■□□□□ 0.98
SF1-203ENST00000377387 PCDHA7Q9UN72 937 aa21.2■□□□□ 0.98
SF1-203ENST00000377387 CCDC158Q5M9N0 1113 aa21.19■□□□□ 0.98
SF1-203ENST00000377387 CADPS2Q86UW7 1296 aa21.19■□□□□ 0.98
SF1-203ENST00000377387 KLHL34Q8N239 644 aa21.19■□□□□ 0.98
SF1-203ENST00000377387 XAGE2Q96GT9 111 aa21.19■□□□□ 0.98
SF1-203ENST00000377387 CCDC94Q9BW85 323 aaPredicted RBP21.19■□□□□ 0.98
SF1-203ENST00000377387 ADAMTS7Q9UKP4 1686 aa21.19■□□□□ 0.98
SF1-203ENST00000377387 CAMTA1Q9Y6Y1 1673 aa21.19■□□□□ 0.98
SF1-203ENST00000377387 RFX7Q2KHR2 1363 aa21.19■□□□□ 0.98
SF1-203ENST00000377387 STRCP1A6NGW2 1772 aa21.19■□□□□ 0.98
SF1-203ENST00000377387 SPATA31A3Q5VYP0 1347 aa21.19■□□□□ 0.98
SF1-203ENST00000377387 ZAP70P43403 619 aa21.19■□□□□ 0.98
SF1-203ENST00000377387 AOPEPQ8N6M6 819 aa21.19■□□□□ 0.98
SF1-203ENST00000377387 CLIC4Q9Y696 253 aa21.19■□□□□ 0.98
SF1-203ENST00000377387 CARMIL3Q8ND23 1372 aa21.19■□□□□ 0.98
SF1-203ENST00000377387 KLF18A0A0U1RQI7 1052 aa21.18■□□□□ 0.98
SF1-203ENST00000377387 BIN1O00499 593 aa21.18■□□□□ 0.98
SF1-203ENST00000377387 FGAP02671 866 aa21.18■□□□□ 0.98
SF1-203ENST00000377387 NAA30Q147X3 362 aaPredicted RBP21.18■□□□□ 0.98
SF1-203ENST00000377387 BRINP3Q76B58 766 aa21.18■□□□□ 0.98
SF1-203ENST00000377387 CCDC191Q8NCU4 936 aa21.18■□□□□ 0.98
SF1-203ENST00000377387 PUS7LQ9H0K6 701 aaKnown RBP21.18■□□□□ 0.98
SF1-203ENST00000377387 ALS2Q96Q42 1657 aa21.18■□□□□ 0.98
SF1-203ENST00000377387 ARFGEF2Q9Y6D5 1785 aa21.18■□□□□ 0.98
SF1-203ENST00000377387 ISM2Q6H9L7 571 aa21.18■□□□□ 0.98
SF1-203ENST00000377387 FAM160A1Q05DH4 1040 aa21.18■□□□□ 0.98
SF1-203ENST00000377387 PKNOX2Q96KN3 472 aa21.18■□□□□ 0.98
SF1-203ENST00000377387 TRMT1Q9NXH9 659 aaKnown RBP21.18■□□□□ 0.98
SF1-203ENST00000377387 DENND2AQ9ULE3 1009 aa21.18■□□□□ 0.98
SF1-203ENST00000377387 GOLGA8BA8MQT2 603 aa21.17■□□□□ 0.98
SF1-203ENST00000377387 PRC1O43663 620 aa21.17■□□□□ 0.98
SF1-203ENST00000377387 STK38Q15208 465 aa21.17■□□□□ 0.98
SF1-203ENST00000377387 ZNF274Q96GC6 653 aaPredicted RBP21.17■□□□□ 0.98
SF1-203ENST00000377387 RXRAP19793 462 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms