RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 IQCB1Q15051 598 aa14.59□□□□□ -0.07
TNFSF13B-201ENST00000375887 ZSCAN25Q6NSZ9 544 aa14.59□□□□□ -0.07
TNFSF13B-201ENST00000375887 ERCC4Q92889 916 aaPredicted RBP14.59□□□□□ -0.07
TNFSF13B-201ENST00000375887 LLPHQ9BRT6 129 aaKnown RBP14.59□□□□□ -0.07
TNFSF13B-201ENST00000375887 PRDM4Q9UKN5 801 aa14.59□□□□□ -0.07
TNFSF13B-201ENST00000375887 HSP90AB3PQ58FF7 597 aa14.58□□□□□ -0.08
TNFSF13B-201ENST00000375887 CCAR1Q8IX12 1150 aaKnown RBP14.58□□□□□ -0.08
TNFSF13B-201ENST00000375887 CACTINQ8WUQ7 758 aaKnown RBP14.58□□□□□ -0.08
TNFSF13B-201ENST00000375887 DSCC1Q9BVC3 393 aa14.58□□□□□ -0.08
TNFSF13B-201ENST00000375887 HELLSQ9NRZ9 838 aa14.58□□□□□ -0.08
TNFSF13B-201ENST00000375887 MST1RQ04912 1400 aa14.58□□□□□ -0.08
TNFSF13B-201ENST00000375887 MAST3O60307 1309 aa14.58□□□□□ -0.08
TNFSF13B-201ENST00000375887 PALLDQ8WX93 1383 aa14.58□□□□□ -0.08
TNFSF13B-201ENST00000375887 PDIA3P30101 505 aaKnown RBP14.58□□□□□ -0.08
TNFSF13B-201ENST00000375887 NAA16Q6N069 864 aaPredicted RBP14.58□□□□□ -0.08
TNFSF13B-201ENST00000375887 RAB11FIP4Q86YS3 637 aa14.58□□□□□ -0.08
TNFSF13B-201ENST00000375887 ZBTB3Q9H5J0 574 aa14.58□□□□□ -0.08
TNFSF13B-201ENST00000375887 ARFGEF2Q9Y6D5 1785 aa14.58□□□□□ -0.08
TNFSF13B-201ENST00000375887 SALL1Q9NSC2 1324 aa14.57□□□□□ -0.08
TNFSF13B-201ENST00000375887 HMGB1P09429 215 aaKnown RBP14.57□□□□□ -0.08
TNFSF13B-201ENST00000375887 ZNF142P52746 1687 aaPredicted RBP14.57□□□□□ -0.08
TNFSF13B-201ENST00000375887 ALS2Q96Q42 1657 aa14.57□□□□□ -0.08
TNFSF13B-201ENST00000375887 M0R2C6 588 aa14.57□□□□□ -0.08
TNFSF13B-201ENST00000375887 FDPSP14324 419 aaKnown RBP14.57□□□□□ -0.08
TNFSF13B-201ENST00000375887 ARID5BQ14865 1188 aa14.57□□□□□ -0.08
TNFSF13B-201ENST00000375887 OSBP2Q969R2 916 aa14.57□□□□□ -0.08
TNFSF13B-201ENST00000375887 LAMA4Q16363 1823 aa14.56□□□□□ -0.08
TNFSF13B-201ENST00000375887 A0A1B0GUL7 405 aa14.56□□□□□ -0.08
TNFSF13B-201ENST00000375887 FOXP2O15409 715 aa14.56□□□□□ -0.08
TNFSF13B-201ENST00000375887 ENGASEQ8NFI3 743 aa14.56□□□□□ -0.08
TNFSF13B-201ENST00000375887 CWC25Q9NXE8 425 aaPredicted RBP14.56□□□□□ -0.08
TNFSF13B-201ENST00000375887 CLIP2Q9UDT6 1046 aa14.56□□□□□ -0.08
TNFSF13B-201ENST00000375887 GLI3P10071 1580 aa14.56□□□□□ -0.08
TNFSF13B-201ENST00000375887 COL18A1P39060 1754 aa14.56□□□□□ -0.08
TNFSF13B-201ENST00000375887 EYA2O00167 538 aa14.56□□□□□ -0.08
TNFSF13B-201ENST00000375887 IL15P40933 162 aaPredicted RBP14.56□□□□□ -0.08
TNFSF13B-201ENST00000375887 OTUD7BQ6GQQ9 843 aa14.56□□□□□ -0.08
TNFSF13B-201ENST00000375887 C16orf45Q96MC5 204 aaPredicted RBP14.56□□□□□ -0.08
TNFSF13B-201ENST00000375887 CCDC94Q9BW85 323 aaPredicted RBP14.56□□□□□ -0.08
TNFSF13B-201ENST00000375887 RNF113AO15541 343 aaKnown RBP14.55□□□□□ -0.08
TNFSF13B-201ENST00000375887 IFIT1P09914 478 aaKnown RBP14.55□□□□□ -0.08
TNFSF13B-201ENST00000375887 GPR108Q9NPR9 543 aa14.55□□□□□ -0.08
TNFSF13B-201ENST00000375887 FKBP4Q02790 459 aaKnown RBP eCLIP14.54□□□□□ -0.08
TNFSF13B-201ENST00000375887 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.54□□□□□ -0.08
TNFSF13B-201ENST00000375887 ADORA1P30542 326 aa14.54□□□□□ -0.08
TNFSF13B-201ENST00000375887 HAND2P61296 217 aa14.54□□□□□ -0.08
TNFSF13B-201ENST00000375887 CTIFO43310 598 aaKnown RBP14.53□□□□□ -0.08
TNFSF13B-201ENST00000375887 DHX40Q8IX18 779 aaKnown RBP14.53□□□□□ -0.08
TNFSF13B-201ENST00000375887 ZNF274Q96GC6 653 aaPredicted RBP14.53□□□□□ -0.08
TNFSF13B-201ENST00000375887 GJB4Q9NTQ9 266 aa14.53□□□□□ -0.08
TNFSF13B-201ENST00000375887 ATF3P18847 181 aa14.53□□□□□ -0.08
TNFSF13B-201ENST00000375887 ME1P48163 572 aa14.53□□□□□ -0.08
TNFSF13B-201ENST00000375887 SCARF1Q14162 830 aa14.53□□□□□ -0.08
TNFSF13B-201ENST00000375887 ATP2B3Q16720 1220 aa14.53□□□□□ -0.08
TNFSF13B-201ENST00000375887 PCDHA7Q9UN72 937 aa14.53□□□□□ -0.08
TNFSF13B-201ENST00000375887 TMEM94Q12767 1356 aa14.53□□□□□ -0.08
TNFSF13B-201ENST00000375887 CARMIL3Q8ND23 1372 aa14.53□□□□□ -0.08
TNFSF13B-201ENST00000375887 FAM160A1Q05DH4 1040 aa14.52□□□□□ -0.08
TNFSF13B-201ENST00000375887 CHAF1AQ13111 956 aaPredicted RBP14.52□□□□□ -0.08
TNFSF13B-201ENST00000375887 FSIP1Q8NA03 581 aa14.52□□□□□ -0.08
TNFSF13B-201ENST00000375887 PRDM10Q9NQV6 1147 aa14.52□□□□□ -0.08
TNFSF13B-201ENST00000375887 CAVIN2O95810 425 aa14.52□□□□□ -0.09
TNFSF13B-201ENST00000375887 STX1AQ16623 288 aa14.52□□□□□ -0.09
TNFSF13B-201ENST00000375887 PPP4R3BQ5MIZ7 849 aa14.52□□□□□ -0.09
TNFSF13B-201ENST00000375887 SARM1Q6SZW1 724 aa14.52□□□□□ -0.09
TNFSF13B-201ENST00000375887 PI16Q6UXB8 463 aa14.52□□□□□ -0.09
TNFSF13B-201ENST00000375887 CCDC73Q6ZRK6 1079 aa14.52□□□□□ -0.09
TNFSF13B-201ENST00000375887 LRRC8AQ8IWT6 810 aa14.52□□□□□ -0.09
TNFSF13B-201ENST00000375887 A0A1B0GVL5 298 aa14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 USP27XA6NNY8 438 aa14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 GOLGA6L19H0YKK7 550 aa14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 CCDC191Q8NCU4 936 aa14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 CTAGE5O15320 804 aa14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 KINO60870 393 aaKnown RBP14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 FGAP02671 866 aa14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 POLR3DP05423 398 aaPredicted RBP14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 TNNT1P13805 278 aa14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 CDC25BP30305 580 aa14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 EVCP57679 992 aa14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 NAA30Q147X3 362 aaPredicted RBP14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 FMR1NBQ8N0W7 255 aaPredicted RBP14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 SYNE4Q8N205 404 aa14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 NKX2-3Q8TAU0 364 aa14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 ANKRD7Q92527 254 aa14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 ZNF396Q96N95 335 aaPredicted RBP14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 CLIC4Q9Y696 253 aa14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 KIF1AQ12756 1690 aa14.51□□□□□ -0.09
TNFSF13B-201ENST00000375887 PUS7LQ9H0K6 701 aaKnown RBP14.5□□□□□ -0.09
TNFSF13B-201ENST00000375887 CEP126Q9P2H0 1117 aa14.5□□□□□ -0.09
TNFSF13B-201ENST00000375887 HPS5Q9UPZ3 1129 aa14.5□□□□□ -0.09
TNFSF13B-201ENST00000375887 CIAO1O76071 339 aa14.5□□□□□ -0.09
TNFSF13B-201ENST00000375887 NDUFA8P51970 172 aa14.5□□□□□ -0.09
TNFSF13B-201ENST00000375887 WASHC4Q2M389 1173 aa14.5□□□□□ -0.09
TNFSF13B-201ENST00000375887 SMAP1Q8IYB5 467 aaPredicted RBP14.5□□□□□ -0.09
TNFSF13B-201ENST00000375887 XAGE2Q96GT9 111 aa14.5□□□□□ -0.09
TNFSF13B-201ENST00000375887 MRFAP1L1Q96HT8 127 aa14.5□□□□□ -0.09
TNFSF13B-201ENST00000375887 DENND2AQ9ULE3 1009 aa14.5□□□□□ -0.09
TNFSF13B-201ENST00000375887 ANTXR2P58335 489 aa14.49□□□□□ -0.09
TNFSF13B-201ENST00000375887 CBX1P83916 185 aa14.49□□□□□ -0.09
TNFSF13B-201ENST00000375887 ATL3Q6DD88 541 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms