RNA–Protein interactions for RNA: ENST00000374813.1

HLA-DOA-202, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 303 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-202ENST00000374813 A0A1W2PPC1 479 aa12.32□□□□□ -0.44
HLA-DOA-202ENST00000374813 MAP3K11Q16584 847 aa12.32□□□□□ -0.44
HLA-DOA-202ENST00000374813 FAM89AQ96GI7 184 aa12.32□□□□□ -0.44
HLA-DOA-202ENST00000374813 KDM3BQ7LBC6 1761 aa12.32□□□□□ -0.44
HLA-DOA-202ENST00000374813 MYO3BQ8WXR4 1341 aa12.32□□□□□ -0.44
HLA-DOA-202ENST00000374813 PSME4Q14997 1843 aa12.32□□□□□ -0.44
HLA-DOA-202ENST00000374813 CNGB1Q14028 1251 aaPredicted RBP12.31□□□□□ -0.44
HLA-DOA-202ENST00000374813 ANKRD13DQ6ZTN6 518 aa12.31□□□□□ -0.44
HLA-DOA-202ENST00000374813 XAGE3Q8WTP9 111 aa12.31□□□□□ -0.44
HLA-DOA-202ENST00000374813 WNK4Q96J92 1243 aa12.31□□□□□ -0.44
HLA-DOA-202ENST00000374813 HTATIP2Q9BUP3 242 aa12.31□□□□□ -0.44
HLA-DOA-202ENST00000374813 NR2E3Q9Y5X4 410 aa12.31□□□□□ -0.44
HLA-DOA-202ENST00000374813 PROSER3Q2NL68 480 aa12.3□□□□□ -0.44
HLA-DOA-202ENST00000374813 NKX2-3Q8TAU0 364 aa12.3□□□□□ -0.44
HLA-DOA-202ENST00000374813 VCANP13611 3396 aa12.29□□□□□ -0.44
HLA-DOA-202ENST00000374813 ANXA1P04083 346 aa12.29□□□□□ -0.44
HLA-DOA-202ENST00000374813 ATP2B4P23634 1241 aa12.29□□□□□ -0.44
HLA-DOA-202ENST00000374813 SUPT20HL1Q3ZLR7 823 aa12.29□□□□□ -0.44
HLA-DOA-202ENST00000374813 DEFB129Q9H1M3 183 aa12.29□□□□□ -0.44
HLA-DOA-202ENST00000374813 PRO3102Q9H379 93 aa12.29□□□□□ -0.44
HLA-DOA-202ENST00000374813 TSPYL4Q9UJ04 414 aa12.29□□□□□ -0.44
HLA-DOA-202ENST00000374813 PTCH2Q9Y6C5 1203 aa12.29□□□□□ -0.44
HLA-DOA-202ENST00000374813 XDHP47989 1333 aa12.29□□□□□ -0.44
HLA-DOA-202ENST00000374813 TESPA1A2RU30 521 aaPredicted RBP12.28□□□□□ -0.44
HLA-DOA-202ENST00000374813 WTIPA6NIX2 430 aaPredicted RBP12.28□□□□□ -0.44
HLA-DOA-202ENST00000374813 IRS4O14654 1257 aaPredicted RBP12.28□□□□□ -0.44
HLA-DOA-202ENST00000374813 WDHD1O75717 1129 aaPredicted RBP12.28□□□□□ -0.44
HLA-DOA-202ENST00000374813 GNRH1P01148 92 aa12.28□□□□□ -0.44
HLA-DOA-202ENST00000374813 IREB2P48200 963 aaKnown RBP12.28□□□□□ -0.44
HLA-DOA-202ENST00000374813 STRIP1Q5VSL9 837 aa12.28□□□□□ -0.44
HLA-DOA-202ENST00000374813 BABAM1Q9NWV8 329 aa12.28□□□□□ -0.44
HLA-DOA-202ENST00000374813 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.28□□□□□ -0.44
HLA-DOA-202ENST00000374813 MYCP01106 439 aaPredicted RBP12.27□□□□□ -0.45
HLA-DOA-202ENST00000374813 PRMT2P55345 433 aa12.27□□□□□ -0.45
HLA-DOA-202ENST00000374813 TRIM28Q13263 835 aaKnown RBP12.27□□□□□ -0.45
HLA-DOA-202ENST00000374813 KIF22Q14807 665 aa12.27□□□□□ -0.45
HLA-DOA-202ENST00000374813 DACT2Q5SW24 774 aa12.27□□□□□ -0.45
HLA-DOA-202ENST00000374813 GPR153Q6NV75 609 aa12.27□□□□□ -0.45
HLA-DOA-202ENST00000374813 PLBD2Q8NHP8 589 aa12.27□□□□□ -0.45
HLA-DOA-202ENST00000374813 CLMNQ96JQ2 1002 aa12.27□□□□□ -0.45
HLA-DOA-202ENST00000374813 PTPN18Q99952 460 aa12.27□□□□□ -0.45
HLA-DOA-202ENST00000374813 ISCA1Q9BUE6 129 aa12.27□□□□□ -0.45
HLA-DOA-202ENST00000374813 ZFYVE28Q9HCC9 887 aa12.27□□□□□ -0.45
HLA-DOA-202ENST00000374813 PPP2R3BQ9Y5P8 575 aa12.27□□□□□ -0.45
HLA-DOA-202ENST00000374813 CLSPNQ9HAW4 1339 aa12.27□□□□□ -0.45
HLA-DOA-202ENST00000374813 LAMB1P07942 1786 aa12.27□□□□□ -0.45
HLA-DOA-202ENST00000374813 DLG5Q8TDM6 1919 aa12.27□□□□□ -0.45
HLA-DOA-202ENST00000374813 COL1A1P02452 1464 aaPredicted RBP12.27□□□□□ -0.45
HLA-DOA-202ENST00000374813 SASH1O94885 1247 aa12.26□□□□□ -0.45
HLA-DOA-202ENST00000374813 CCDC152Q4G0S7 254 aa12.26□□□□□ -0.45
HLA-DOA-202ENST00000374813 ANKRD13AQ8IZ07 590 aa12.26□□□□□ -0.45
HLA-DOA-202ENST00000374813 PNNQ9H307 717 aaKnown RBP12.26□□□□□ -0.45
HLA-DOA-202ENST00000374813 CAP1Q01518 475 aa12.25□□□□□ -0.45
HLA-DOA-202ENST00000374813 NFE2L2Q16236 605 aa12.25□□□□□ -0.45
HLA-DOA-202ENST00000374813 RTL5Q5HYW3 569 aaPredicted RBP12.25□□□□□ -0.45
HLA-DOA-202ENST00000374813 TTLL5Q6EMB2 1281 aa12.25□□□□□ -0.45
HLA-DOA-202ENST00000374813 SH3TC2Q8TF17 1288 aa12.25□□□□□ -0.45
HLA-DOA-202ENST00000374813 FBXW7Q969H0 707 aa12.25□□□□□ -0.45
HLA-DOA-202ENST00000374813 ZNF428Q96B54 188 aa12.25□□□□□ -0.45
HLA-DOA-202ENST00000374813 COA1Q9GZY4 146 aa12.25□□□□□ -0.45
HLA-DOA-202ENST00000374813 SEC31BQ9NQW1 1179 aa12.25□□□□□ -0.45
HLA-DOA-202ENST00000374813 FZD1Q9UP38 647 aa12.25□□□□□ -0.45
HLA-DOA-202ENST00000374813 ATP5J2-PTCD1G3V325 749 aa12.24□□□□□ -0.45
HLA-DOA-202ENST00000374813 TAF1CQ15572 869 aaPredicted RBP12.24□□□□□ -0.45
HLA-DOA-202ENST00000374813 ANKRD18AQ8IVF6 992 aa12.24□□□□□ -0.45
HLA-DOA-202ENST00000374813 ZBTB38Q8NAP3 1195 aaPredicted RBP12.24□□□□□ -0.45
HLA-DOA-202ENST00000374813 ZBED3Q96IU2 234 aaPredicted RBP12.24□□□□□ -0.45
HLA-DOA-202ENST00000374813 MED23Q9ULK4 1368 aa12.23□□□□□ -0.45
HLA-DOA-202ENST00000374813 ZBTB7BO15156 539 aaPredicted RBP12.23□□□□□ -0.45
HLA-DOA-202ENST00000374813 MYO1BO43795 1136 aa12.23□□□□□ -0.45
HLA-DOA-202ENST00000374813 DLGAP5Q15398 846 aa12.23□□□□□ -0.45
HLA-DOA-202ENST00000374813 MXD3Q9BW11 206 aa12.23□□□□□ -0.45
HLA-DOA-202ENST00000374813 STXBP5LQ9Y2K9 1186 aa12.23□□□□□ -0.45
HLA-DOA-202ENST00000374813 ZNF646O15015 1829 aaPredicted RBP12.23□□□□□ -0.45
HLA-DOA-202ENST00000374813 USP2O75604 605 aaPredicted RBP12.22□□□□□ -0.45
HLA-DOA-202ENST00000374813 GJB1P08034 283 aa12.22□□□□□ -0.45
HLA-DOA-202ENST00000374813 CAPN2P17655 700 aa12.22□□□□□ -0.45
HLA-DOA-202ENST00000374813 GJA5P36382 358 aa12.22□□□□□ -0.45
HLA-DOA-202ENST00000374813 GJA8P48165 433 aa12.22□□□□□ -0.45
HLA-DOA-202ENST00000374813 GTF2A2P52657 109 aa12.22□□□□□ -0.45
HLA-DOA-202ENST00000374813 KIAA0825Q8IV33 1275 aa12.22□□□□□ -0.45
HLA-DOA-202ENST00000374813 HELBQ8NG08 1087 aaPredicted RBP12.22□□□□□ -0.45
HLA-DOA-202ENST00000374813 LRCH3Q96II8 777 aa12.22□□□□□ -0.45
HLA-DOA-202ENST00000374813 MS4A4AQ96JQ5 239 aa12.22□□□□□ -0.45
HLA-DOA-202ENST00000374813 COL25A1Q9BXS0 654 aaPredicted RBP12.22□□□□□ -0.45
HLA-DOA-202ENST00000374813 SOX1O00570 391 aaPredicted RBP12.21□□□□□ -0.45
HLA-DOA-202ENST00000374813 EVI5O60447 810 aa12.21□□□□□ -0.45
HLA-DOA-202ENST00000374813 TLR2O60603 784 aa12.21□□□□□ -0.45
HLA-DOA-202ENST00000374813 PDE8AO60658 829 aa12.21□□□□□ -0.45
HLA-DOA-202ENST00000374813 HOXD10P28358 340 aa12.21□□□□□ -0.45
HLA-DOA-202ENST00000374813 PPP2R1AP30153 589 aa12.21□□□□□ -0.45
HLA-DOA-202ENST00000374813 LACTBP83111 547 aaPredicted RBP12.21□□□□□ -0.45
HLA-DOA-202ENST00000374813 UBE2Q1Q7Z7E8 422 aa12.21□□□□□ -0.45
HLA-DOA-202ENST00000374813 DEFB123Q8N688 67 aa12.21□□□□□ -0.45
HLA-DOA-202ENST00000374813 MTMR14Q8NCE2 650 aa12.21□□□□□ -0.45
HLA-DOA-202ENST00000374813 OPTNQ96CV9 577 aa12.21□□□□□ -0.45
HLA-DOA-202ENST00000374813 SHISA4Q96DD7 197 aa12.21□□□□□ -0.45
HLA-DOA-202ENST00000374813 PLEKHF1Q96S99 279 aa12.21□□□□□ -0.45
HLA-DOA-202ENST00000374813 CDC5LQ99459 802 aaKnown RBP12.21□□□□□ -0.45
HLA-DOA-202ENST00000374813 COL4A1P02462 1669 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms