RNA–Protein interactions for RNA: ENST00000374720.7

SLC44A1-201, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC44A1, Length 10,511 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-201ENST00000374720 LRRC9Q6ZRR7 1453 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 E7EVH7 732 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 NOLC1Q14978 699 aaKnown RBP eCLIP13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 KARSQ15046 597 aaKnown RBP13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 CACNA2D3Q8IZS8 1091 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 ALG1Q9BT22 464 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 TSGA10Q9BZW7 698 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 AGTPBP1Q9UPW5 1226 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 NEDD9Q14511 834 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 PSMD6Q15008 389 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 RTN1Q16799 776 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 C10orf67Q8IYJ2 551 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 SSH1Q8WYL5 1049 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 GAPVD1Q14C86 1478 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 VAV2P52735 878 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 PPP1R21Q6ZMI0 780 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 C11orf95C9JLR9 678 aaPredicted RBP13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 BMP15O95972 392 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 CCDC42Q96M95 316 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 ARID4AP29374 1257 aaPredicted RBP13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 SEL1L2Q5TEA6 688 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 FYB2Q5VWT5 728 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 IFT74Q96LB3 600 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 LZTFL1Q9NQ48 299 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 HPDP32754 393 aaPredicted RBP13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 IRX5P78411 483 aaPredicted RBP13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 KIFC2Q96AC6 838 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 FANCD2Q9BXW9 1451 aa13.11□□□□□ -0.31
SLC44A1-201ENST00000374720 KLF18A0A0U1RQI7 1052 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 NAPAP54920 295 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 KCNH5Q8NCM2 988 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 KRT23Q9C075 422 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 ERICH3Q5RHP9 1530 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 CADPSQ9ULU8 1353 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 ATP5DP30049 168 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 ZBTB43O43298 467 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 ZSCAN22P10073 491 aaPredicted RBP13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 SPAG1Q07617 926 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 CLUL1Q15846 466 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 C6orf50Q9HD87 102 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 ANKLE2Q86XL3 938 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 LUC7L2Q9Y383 392 aaKnown RBP13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 PLEKHH2Q8IVE3 1493 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 BUB1BO60566 1050 aaPredicted RBP13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 CUL4BQ13620 913 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 RTL1A6NKG5 1358 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 ZNF622Q969S3 477 aaKnown RBP eCLIP13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 ECHDC1Q9NTX5 307 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 ADAMTS2O95450 1211 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 ZNF569Q5MCW4 686 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 PPP1R12CQ9BZL4 782 aa13.1□□□□□ -0.31
SLC44A1-201ENST00000374720 KRT5P13647 590 aa13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 SMARCC2Q8TAQ2 1214 aa13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 NECAB1Q8N987 351 aa13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 BICDL2A1A5D9 508 aa13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 CALCOCO2Q13137 446 aa13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 LRRC2Q9BYS8 371 aa13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 RSPH3Q86UC2 560 aa13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 DHX58Q96C10 678 aa13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 ZBTB3Q9H5J0 574 aa13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 MTUS1Q9ULD2 1270 aa13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 RUSC2Q8N2Y8 1516 aa13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 GPR161Q8N6U8 529 aaKnown RBP13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 MRRFQ96E11 262 aaKnown RBP13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 TNNC1P63316 161 aa13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 AMOTQ4VCS5 1084 aa13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 SDCCAG8Q86SQ7 713 aaPredicted RBP13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 SKAP1Q86WV1 359 aa13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 CCDC186Q7Z3E2 898 aa13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 ZBTB21Q9ULJ3 1066 aa13.09□□□□□ -0.31
SLC44A1-201ENST00000374720 MRPS27Q92552 414 aaKnown RBP13.08□□□□□ -0.31
SLC44A1-201ENST00000374720 ZNF853P0CG23 659 aa13.08□□□□□ -0.32
SLC44A1-201ENST00000374720 LDHAL6AQ6ZMR3 332 aa13.08□□□□□ -0.32
SLC44A1-201ENST00000374720 LMNTD2Q8IXW0 634 aa13.08□□□□□ -0.32
SLC44A1-201ENST00000374720 GABPAQ06546 454 aa13.08□□□□□ -0.32
SLC44A1-201ENST00000374720 DCAF17Q5H9S7 520 aaPredicted RBP13.08□□□□□ -0.32
SLC44A1-201ENST00000374720 ST5P78524 1137 aa13.08□□□□□ -0.32
SLC44A1-201ENST00000374720 DNAJC25Q9H1X3 360 aa13.08□□□□□ -0.32
SLC44A1-201ENST00000374720 MCM7P33993 719 aa13.08□□□□□ -0.32
SLC44A1-201ENST00000374720 HDXQ7Z353 690 aa13.08□□□□□ -0.32
SLC44A1-201ENST00000374720 HFM1A2PYH4 1435 aa13.08□□□□□ -0.32
SLC44A1-201ENST00000374720 C9orf84Q5VXU9 1444 aa13.08□□□□□ -0.32
SLC44A1-201ENST00000374720 PTPRCP08575 1304 aa13.08□□□□□ -0.32
SLC44A1-201ENST00000374720 SPDYE3A6NKU9 549 aa13.08□□□□□ -0.32
SLC44A1-201ENST00000374720 LMOD1P29536 600 aaPredicted RBP13.08□□□□□ -0.32
SLC44A1-201ENST00000374720 ZNF131P52739 623 aa13.08□□□□□ -0.32
SLC44A1-201ENST00000374720 ITIH3Q06033 890 aa13.08□□□□□ -0.32
SLC44A1-201ENST00000374720 ARHGEF2Q92974 986 aaKnown RBP13.08□□□□□ -0.32
SLC44A1-201ENST00000374720 TUBB4BP68371 445 aa13.07□□□□□ -0.32
SLC44A1-201ENST00000374720 DDX27Q96GQ7 796 aaKnown RBP13.07□□□□□ -0.32
SLC44A1-201ENST00000374720 ECM2O94769 699 aaPredicted RBP13.07□□□□□ -0.32
SLC44A1-201ENST00000374720 AFAP1Q8N556 730 aa13.07□□□□□ -0.32
SLC44A1-201ENST00000374720 USP48Q86UV5 1035 aa13.07□□□□□ -0.32
SLC44A1-201ENST00000374720 F8W031 263 aaPredicted RBP13.07□□□□□ -0.32
SLC44A1-201ENST00000374720 RARSP54136 660 aaKnown RBP13.07□□□□□ -0.32
SLC44A1-201ENST00000374720 RAPGEF1Q13905 1077 aa13.07□□□□□ -0.32
SLC44A1-201ENST00000374720 KLHL40Q2TBA0 621 aa13.07□□□□□ -0.32
SLC44A1-201ENST00000374720 AFAP1L2Q8N4X5 818 aa13.07□□□□□ -0.32
SLC44A1-201ENST00000374720 GIPC1O14908 333 aa13.07□□□□□ -0.32
SLC44A1-201ENST00000374720 PICALMQ13492 652 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms