RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 CNNM1Q9NRU3 951 aa20.1■□□□□ 0.81
RXRB-201ENST00000374680 ALS2Q96Q42 1657 aa20.1■□□□□ 0.81
RXRB-201ENST00000374680 UQCRHLA0A096LP55 91 aa20.09■□□□□ 0.81
RXRB-201ENST00000374680 POLR3DP05423 398 aaPredicted RBP20.09■□□□□ 0.81
RXRB-201ENST00000374680 UQCRHP07919 91 aa20.09■□□□□ 0.81
RXRB-201ENST00000374680 RESTQ13127 1097 aa20.09■□□□□ 0.81
RXRB-201ENST00000374680 MRVI1Q9Y6F6 885 aa20.09■□□□□ 0.81
RXRB-201ENST00000374680 CRYBG1Q9Y4K1 1723 aa20.09■□□□□ 0.81
RXRB-201ENST00000374680 IDH1O75874 414 aaKnown RBP20.09■□□□□ 0.81
RXRB-201ENST00000374680 CARD10Q9BWT7 1032 aa20.09■□□□□ 0.81
RXRB-201ENST00000374680 HELLSQ9NRZ9 838 aa20.09■□□□□ 0.81
RXRB-201ENST00000374680 AFDNP55196 1824 aaKnown RBP20.08■□□□□ 0.81
RXRB-201ENST00000374680 FGAP02671 866 aa20.08■□□□□ 0.81
RXRB-201ENST00000374680 UVSSAQ2YD98 709 aa20.08■□□□□ 0.81
RXRB-201ENST00000374680 INCENPQ9NQS7 918 aa20.08■□□□□ 0.81
RXRB-201ENST00000374680 ITGA6P23229 1130 aa20.07■□□□□ 0.8
RXRB-201ENST00000374680 PDIA3P30101 505 aaKnown RBP20.07■□□□□ 0.8
RXRB-201ENST00000374680 CCDC144CPQ8IYA2 1237 aa20.07■□□□□ 0.8
RXRB-201ENST00000374680 USP28Q96RU2 1077 aa20.07■□□□□ 0.8
RXRB-201ENST00000374680 ATG3Q9NT62 314 aa20.07■□□□□ 0.8
RXRB-201ENST00000374680 TRMT112Q9UI30 125 aaKnown RBP20.07■□□□□ 0.8
RXRB-201ENST00000374680 ISCA1Q9BUE6 129 aa20.07■□□□□ 0.8
RXRB-201ENST00000374680 SH3TC1Q8TE82 1336 aa20.07■□□□□ 0.8
RXRB-201ENST00000374680 CBX8Q9HC52 389 aa20.06■□□□□ 0.8
RXRB-201ENST00000374680 PFKFB2O60825 505 aa20.06■□□□□ 0.8
RXRB-201ENST00000374680 ME1P48163 572 aa20.06■□□□□ 0.8
RXRB-201ENST00000374680 SASS6Q6UVJ0 657 aa20.06■□□□□ 0.8
RXRB-201ENST00000374680 NKX2-3Q8TAU0 364 aa20.06■□□□□ 0.8
RXRB-201ENST00000374680 NRBP1Q9UHY1 535 aa20.06■□□□□ 0.8
RXRB-201ENST00000374680 ZBTB1Q9Y2K1 713 aa20.06■□□□□ 0.8
RXRB-201ENST00000374680 ATP2B3Q16720 1220 aa20.06■□□□□ 0.8
RXRB-201ENST00000374680 STRCP1A6NGW2 1772 aa20.05■□□□□ 0.8
RXRB-201ENST00000374680 EXOSC10Q01780 885 aaKnown RBP20.05■□□□□ 0.8
RXRB-201ENST00000374680 CCAR1Q8IX12 1150 aaKnown RBP20.05■□□□□ 0.8
RXRB-201ENST00000374680 DSCC1Q9BVC3 393 aa20.05■□□□□ 0.8
RXRB-201ENST00000374680 TRIM5Q9C035 493 aa20.05■□□□□ 0.8
RXRB-201ENST00000374680 PYCARDQ9ULZ3 195 aa20.05■□□□□ 0.8
RXRB-201ENST00000374680 COL18A1P39060 1754 aa20.05■□□□□ 0.8
RXRB-201ENST00000374680 CPDO75976 1380 aa20.05■□□□□ 0.8
RXRB-201ENST00000374680 STARD3NLO95772 234 aa20.05■□□□□ 0.8
RXRB-201ENST00000374680 NOLC1Q14978 699 aaKnown RBP eCLIP20.05■□□□□ 0.8
RXRB-201ENST00000374680 KIF1AQ12756 1690 aa20.04■□□□□ 0.8
RXRB-201ENST00000374680 KLF18A0A0U1RQI7 1052 aa20.04■□□□□ 0.8
RXRB-201ENST00000374680 PTGS1P23219 599 aa20.04■□□□□ 0.8
RXRB-201ENST00000374680 SLC4A9Q96Q91 983 aa20.04■□□□□ 0.8
RXRB-201ENST00000374680 SLC9C2Q5TAH2 1124 aa20.04■□□□□ 0.8
RXRB-201ENST00000374680 FAM200AQ8TCP9 573 aa20.04■□□□□ 0.8
RXRB-201ENST00000374680 ALDH8A1Q9H2A2 487 aaPredicted RBP20.04■□□□□ 0.8
RXRB-201ENST00000374680 GPAA1O43292 621 aa20.03■□□□□ 0.8
RXRB-201ENST00000374680 PRC1O43663 620 aa20.03■□□□□ 0.8
RXRB-201ENST00000374680 MCAMP43121 646 aa20.03■□□□□ 0.8
RXRB-201ENST00000374680 ACSBG1Q96GR2 724 aa20.03■□□□□ 0.8
RXRB-201ENST00000374680 JCADQ9P266 1359 aa20.03■□□□□ 0.8
RXRB-201ENST00000374680 IRS4O14654 1257 aaPredicted RBP20.03■□□□□ 0.8
RXRB-201ENST00000374680 FOXP2O15409 715 aa20.03■□□□□ 0.8
RXRB-201ENST00000374680 TPM2P07951 284 aa20.03■□□□□ 0.8
RXRB-201ENST00000374680 ZNF165P49910 485 aa20.03■□□□□ 0.8
RXRB-201ENST00000374680 GOLGA8BA8MQT2 603 aa20.03■□□□□ 0.8
RXRB-201ENST00000374680 HMGB1P09429 215 aaKnown RBP20.03■□□□□ 0.8
RXRB-201ENST00000374680 LRMPQ12912 555 aa20.03■□□□□ 0.8
RXRB-201ENST00000374680 IMMTQ16891 758 aaKnown RBP20.03■□□□□ 0.8
RXRB-201ENST00000374680 GOLPH3LQ9H4A5 285 aa20.03■□□□□ 0.8
RXRB-201ENST00000374680 TTLL11Q8NHH1 800 aa20.02■□□□□ 0.8
RXRB-201ENST00000374680 AIFM3Q96NN9 605 aa20.02■□□□□ 0.8
RXRB-201ENST00000374680 IQSEC3Q9UPP2 1182 aaPredicted RBP20.02■□□□□ 0.8
RXRB-201ENST00000374680 AKAP2Q9Y2D5 859 aa20.02■□□□□ 0.8
RXRB-201ENST00000374680 ARFGEF2Q9Y6D5 1785 aa20.02■□□□□ 0.79
RXRB-201ENST00000374680 NKX1-1Q15270 411 aaPredicted RBP20.02■□□□□ 0.79
RXRB-201ENST00000374680 RALYLQ86SE5 291 aaKnown RBP20.02■□□□□ 0.79
RXRB-201ENST00000374680 ZBTB38Q8NAP3 1195 aaPredicted RBP20.02■□□□□ 0.79
RXRB-201ENST00000374680 SMARCC2Q8TAQ2 1214 aa20.02■□□□□ 0.79
RXRB-201ENST00000374680 GPR108Q9NPR9 543 aa20.02■□□□□ 0.79
RXRB-201ENST00000374680 CFAP45Q9UL16 551 aa20.02■□□□□ 0.79
RXRB-201ENST00000374680 COL5A2P05997 1499 aaPredicted RBP20.02■□□□□ 0.79
RXRB-201ENST00000374680 CPLX1O14810 134 aa20.01■□□□□ 0.79
RXRB-201ENST00000374680 FDPSP14324 419 aaKnown RBP20.01■□□□□ 0.79
RXRB-201ENST00000374680 PHKA1P46020 1223 aa20.01■□□□□ 0.79
RXRB-201ENST00000374680 NLRP10Q86W26 655 aa20.01■□□□□ 0.79
RXRB-201ENST00000374680 KCNF1Q9H3M0 494 aa20.01■□□□□ 0.79
RXRB-201ENST00000374680 CLSTN2Q9H4D0 955 aa20.01■□□□□ 0.79
RXRB-201ENST00000374680 ADAMTS7Q9UKP4 1686 aa20.01■□□□□ 0.79
RXRB-201ENST00000374680 A0A1B0GVL5 298 aa20.01■□□□□ 0.79
RXRB-201ENST00000374680 ZNF213O14771 459 aa20.01■□□□□ 0.79
RXRB-201ENST00000374680 ELP1O95163 1332 aa20.01■□□□□ 0.79
RXRB-201ENST00000374680 MCM5P33992 734 aa20.01■□□□□ 0.79
RXRB-201ENST00000374680 CCDC186Q7Z3E2 898 aa20.01■□□□□ 0.79
RXRB-201ENST00000374680 PALLDQ8WX93 1383 aa20■□□□□ 0.79
RXRB-201ENST00000374680 SOS2Q07890 1332 aaPredicted RBP20■□□□□ 0.79
RXRB-201ENST00000374680 PCCAP05165 728 aaPredicted RBP20■□□□□ 0.79
RXRB-201ENST00000374680 ADD1P35611 737 aaKnown RBP20■□□□□ 0.79
RXRB-201ENST00000374680 ISM2Q6H9L7 571 aa20■□□□□ 0.79
RXRB-201ENST00000374680 MYL10Q9BUA6 226 aa20■□□□□ 0.79
RXRB-201ENST00000374680 CIAO1O76071 339 aa20■□□□□ 0.79
RXRB-201ENST00000374680 SF3A1Q15459 793 aaKnown RBP20■□□□□ 0.79
RXRB-201ENST00000374680 SENP2Q9HC62 589 aa20■□□□□ 0.79
RXRB-201ENST00000374680 DDX19AQ9NUU7 478 aaKnown RBP20■□□□□ 0.79
RXRB-201ENST00000374680 GIGYF2Q6Y7W6 1299 aaKnown RBP19.99■□□□□ 0.79
RXRB-201ENST00000374680 CCDC82Q8N4S0 544 aa19.99■□□□□ 0.79
RXRB-201ENST00000374680 FSIP1Q8NA03 581 aa19.99■□□□□ 0.79
RXRB-201ENST00000374680 ZSCAN16Q9H4T2 348 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms