RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 MCMDC2Q4G0Z9 681 aa15.25■□□□□ 0.03
RAPGEF1-201ENST00000372189 MIPOL1Q8TD10 442 aa15.25■□□□□ 0.03
RAPGEF1-201ENST00000372189 ANKRD62A6NC57 917 aa15.24■□□□□ 0.03
RAPGEF1-201ENST00000372189 BAG6P46379 1132 aa15.24■□□□□ 0.03
RAPGEF1-201ENST00000372189 MNAT1P51948 309 aa15.24■□□□□ 0.03
RAPGEF1-201ENST00000372189 DAAM2Q86T65 1068 aa15.24■□□□□ 0.03
RAPGEF1-201ENST00000372189 ZCCHC11Q5TAX3 1644 aaKnown RBP15.24■□□□□ 0.03
RAPGEF1-201ENST00000372189 TRAF1Q13077 416 aa15.24■□□□□ 0.03
RAPGEF1-201ENST00000372189 IFIT1BQ5T764 474 aaKnown RBP15.24■□□□□ 0.03
RAPGEF1-201ENST00000372189 PAXBP1Q9Y5B6 917 aa15.24■□□□□ 0.03
RAPGEF1-201ENST00000372189 PLEKHG1Q9ULL1 1385 aa15.24■□□□□ 0.03
RAPGEF1-201ENST00000372189 ZSCAN23Q3MJ62 389 aa15.24■□□□□ 0.03
RAPGEF1-201ENST00000372189 PLXNC1O60486 1568 aa15.23■□□□□ 0.03
RAPGEF1-201ENST00000372189 POLR3GO15318 223 aaPredicted RBP15.23■□□□□ 0.03
RAPGEF1-201ENST00000372189 LDHBP07195 334 aaKnown RBP15.23■□□□□ 0.03
RAPGEF1-201ENST00000372189 STX1AQ16623 288 aa15.23■□□□□ 0.03
RAPGEF1-201ENST00000372189 UBA5Q9GZZ9 404 aa15.23■□□□□ 0.03
RAPGEF1-201ENST00000372189 TMEM94Q12767 1356 aa15.23■□□□□ 0.03
RAPGEF1-201ENST00000372189 GNAT2P19087 354 aa15.23■□□□□ 0.03
RAPGEF1-201ENST00000372189 SLC26A6Q9BXS9 759 aa15.23■□□□□ 0.03
RAPGEF1-201ENST00000372189 UGGT1Q9NYU2 1555 aa15.23■□□□□ 0.03
RAPGEF1-201ENST00000372189 IGHDP01880 384 aa15.23■□□□□ 0.03
RAPGEF1-201ENST00000372189 TFCP2Q12800 502 aa15.23■□□□□ 0.03
RAPGEF1-201ENST00000372189 TMTC2Q8N394 836 aa15.23■□□□□ 0.03
RAPGEF1-201ENST00000372189 BICC1Q9H694 974 aaKnown RBP15.23■□□□□ 0.03
RAPGEF1-201ENST00000372189 CFAP65Q6ZU64 1925 aaKnown RBP15.22■□□□□ 0.03
RAPGEF1-201ENST00000372189 KIF3CO14782 793 aa15.22■□□□□ 0.03
RAPGEF1-201ENST00000372189 LRSAM1Q6UWE0 723 aa15.22■□□□□ 0.03
RAPGEF1-201ENST00000372189 CKAP2LQ8IYA6 745 aa15.22■□□□□ 0.03
RAPGEF1-201ENST00000372189 TRMT1Q9NXH9 659 aaKnown RBP15.22■□□□□ 0.03
RAPGEF1-201ENST00000372189 GOLGA6L9A6NEM1 432 aa15.22■□□□□ 0.03
RAPGEF1-201ENST00000372189 EZRP15311 586 aaKnown RBP15.22■□□□□ 0.03
RAPGEF1-201ENST00000372189 PDE1AP54750 535 aa15.22■□□□□ 0.03
RAPGEF1-201ENST00000372189 BMS1Q14692 1282 aaKnown RBP15.22■□□□□ 0.03
RAPGEF1-201ENST00000372189 LARP6Q9BRS8 491 aaKnown RBP15.22■□□□□ 0.03
RAPGEF1-201ENST00000372189 CAVIN2O95810 425 aa15.22■□□□□ 0.03
RAPGEF1-201ENST00000372189 SAMD9LQ8IVG5 1584 aa15.22■□□□□ 0.03
RAPGEF1-201ENST00000372189 UBE2HP62256 183 aa15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 CALML4Q96GE6 196 aa15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 METTL22Q9BUU2 404 aaPredicted RBP15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 LGR6Q9HBX8 967 aa15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 UFL1O94874 794 aa15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 POTEJP0CG39 1038 aa15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 TNNI2P48788 182 aa15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 RAB11FIP4Q86YS3 637 aa15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 FAM89AQ96GI7 184 aa15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 ORC3Q9UBD5 711 aaPredicted RBP15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 SH3TC1Q8TE82 1336 aa15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 MAGI3Q5TCQ9 1506 aa15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 H0YIN7 160 aa15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 FKBP15Q5T1M5 1219 aa15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 MAGEB6Q8N7X4 407 aa15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 STX6O43752 255 aa15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 TRERF1Q96PN7 1200 aa15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 TCP11L1Q9NUJ3 509 aa15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 SAMM50Q9Y512 469 aa15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 GJA3Q9Y6H8 435 aa15.21■□□□□ 0.03
RAPGEF1-201ENST00000372189 KIF20AO95235 890 aa15.21■□□□□ 0.02
RAPGEF1-201ENST00000372189 HOXB7P09629 217 aa15.21■□□□□ 0.02
RAPGEF1-201ENST00000372189 SNW1Q13573 536 aaKnown RBP15.21■□□□□ 0.02
RAPGEF1-201ENST00000372189 SLMAPQ14BN4 828 aa15.21■□□□□ 0.02
RAPGEF1-201ENST00000372189 CEP135Q66GS9 1140 aa15.21■□□□□ 0.02
RAPGEF1-201ENST00000372189 RNF113AO15541 343 aaKnown RBP15.2■□□□□ 0.02
RAPGEF1-201ENST00000372189 SDSP20132 328 aa15.2■□□□□ 0.02
RAPGEF1-201ENST00000372189 GTF2F1P35269 517 aaKnown RBP eCLIP15.2■□□□□ 0.02
RAPGEF1-201ENST00000372189 DENND2AQ9ULE3 1009 aa15.2■□□□□ 0.02
RAPGEF1-201ENST00000372189 TTC41PQ6P2S7 1318 aa15.2■□□□□ 0.02
RAPGEF1-201ENST00000372189 GJB2P29033 226 aa15.2■□□□□ 0.02
RAPGEF1-201ENST00000372189 RBM27Q9P2N5 1060 aaKnown RBP15.2■□□□□ 0.02
RAPGEF1-201ENST00000372189 PDE8AO60658 829 aa15.2■□□□□ 0.02
RAPGEF1-201ENST00000372189 ERVV-2B6SEH9 535 aa15.2■□□□□ 0.02
RAPGEF1-201ENST00000372189 ITGA6P23229 1130 aa15.2■□□□□ 0.02
RAPGEF1-201ENST00000372189 LRCH2Q5VUJ6 765 aa15.2■□□□□ 0.02
RAPGEF1-201ENST00000372189 KLF18A0A0U1RQI7 1052 aa15.2■□□□□ 0.02
RAPGEF1-201ENST00000372189 CCDC150Q8NCX0 1101 aa15.2■□□□□ 0.02
RAPGEF1-201ENST00000372189 CCDC171Q6TFL3 1326 aa15.19■□□□□ 0.02
RAPGEF1-201ENST00000372189 GNAQP50148 359 aa15.19■□□□□ 0.02
RAPGEF1-201ENST00000372189 ZBTB43O43298 467 aa15.19■□□□□ 0.02
RAPGEF1-201ENST00000372189 HCLS1P14317 486 aaPredicted RBP15.19■□□□□ 0.02
RAPGEF1-201ENST00000372189 MAP2K1Q02750 393 aaPredicted RBP15.19■□□□□ 0.02
RAPGEF1-201ENST00000372189 FSIP1Q8NA03 581 aa15.19■□□□□ 0.02
RAPGEF1-201ENST00000372189 MCM9Q9NXL9 1143 aa15.19■□□□□ 0.02
RAPGEF1-201ENST00000372189 HECW2Q9P2P5 1572 aa15.19■□□□□ 0.02
RAPGEF1-201ENST00000372189 CHMP2AO43633 222 aa15.19■□□□□ 0.02
RAPGEF1-201ENST00000372189 TMC6Q7Z403 805 aa15.19■□□□□ 0.02
RAPGEF1-201ENST00000372189 CEP85Q6P2H3 762 aa15.19■□□□□ 0.02
RAPGEF1-201ENST00000372189 GGA1Q9UJY5 639 aa15.19■□□□□ 0.02
RAPGEF1-201ENST00000372189 NLRP1Q9C000 1473 aa15.19■□□□□ 0.02
RAPGEF1-201ENST00000372189 MLH3Q9UHC1 1453 aa15.19■□□□□ 0.02
RAPGEF1-201ENST00000372189 FGFR1OPO95684 399 aaKnown RBP15.18■□□□□ 0.02
RAPGEF1-201ENST00000372189 MIGA1Q8NAN2 632 aa15.18■□□□□ 0.02
RAPGEF1-201ENST00000372189 AMPD3Q01432 767 aa15.18■□□□□ 0.02
RAPGEF1-201ENST00000372189 PIK3R5Q8WYR1 880 aa15.18■□□□□ 0.02
RAPGEF1-201ENST00000372189 TTC37Q6PGP7 1564 aa15.18■□□□□ 0.02
RAPGEF1-201ENST00000372189 SPDYE4A6NLX3 237 aa15.18■□□□□ 0.02
RAPGEF1-201ENST00000372189 YEATS4O95619 227 aa15.18■□□□□ 0.02
RAPGEF1-201ENST00000372189 A1BGP04217 495 aa15.18■□□□□ 0.02
RAPGEF1-201ENST00000372189 USO1O60763 962 aaKnown RBP15.18■□□□□ 0.02
RAPGEF1-201ENST00000372189 XRCC6P12956 609 aaKnown RBP eCLIP15.18■□□□□ 0.02
RAPGEF1-201ENST00000372189 GDPD2Q9HCC8 539 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 336.6 ms