RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 ADD1P35611 737 aaKnown RBP12.75□□□□□ -0.37
LRIF1-201ENST00000369763 STK38Q15208 465 aa12.75□□□□□ -0.37
LRIF1-201ENST00000369763 USPL1Q5W0Q7 1092 aa12.75□□□□□ -0.37
LRIF1-201ENST00000369763 CEP135Q66GS9 1140 aa12.75□□□□□ -0.37
LRIF1-201ENST00000369763 LRRC8AQ8IWT6 810 aa12.75□□□□□ -0.37
LRIF1-201ENST00000369763 IFNL2Q8IZJ0 200 aa12.75□□□□□ -0.37
LRIF1-201ENST00000369763 AIFM3Q96NN9 605 aa12.75□□□□□ -0.37
LRIF1-201ENST00000369763 PDIA3P30101 505 aaKnown RBP12.74□□□□□ -0.37
LRIF1-201ENST00000369763 GTF2F1P35269 517 aaKnown RBP eCLIP12.74□□□□□ -0.37
LRIF1-201ENST00000369763 NDUFA8P51970 172 aa12.74□□□□□ -0.37
LRIF1-201ENST00000369763 SYNE4Q8N205 404 aa12.74□□□□□ -0.37
LRIF1-201ENST00000369763 OSBP2Q969R2 916 aa12.74□□□□□ -0.37
LRIF1-201ENST00000369763 PCDHA7Q9UN72 937 aa12.74□□□□□ -0.37
LRIF1-201ENST00000369763 IQCB1Q15051 598 aa12.74□□□□□ -0.37
LRIF1-201ENST00000369763 STX1AQ16623 288 aa12.74□□□□□ -0.37
LRIF1-201ENST00000369763 ZSCAN16Q9H4T2 348 aaPredicted RBP12.74□□□□□ -0.37
LRIF1-201ENST00000369763 NBPF26B4DH59 902 aa12.74□□□□□ -0.37
LRIF1-201ENST00000369763 CPLX1O14810 134 aa12.74□□□□□ -0.37
LRIF1-201ENST00000369763 PFKFB2O60825 505 aa12.74□□□□□ -0.37
LRIF1-201ENST00000369763 APPP05067 770 aa12.74□□□□□ -0.37
LRIF1-201ENST00000369763 ZSCAN20P17040 1043 aaPredicted RBP12.74□□□□□ -0.37
LRIF1-201ENST00000369763 SNW1Q13573 536 aaKnown RBP12.74□□□□□ -0.37
LRIF1-201ENST00000369763 DPCR1Q3MIW9 517 aa12.74□□□□□ -0.37
LRIF1-201ENST00000369763 NBPF14Q5TI25 921 aa12.74□□□□□ -0.37
LRIF1-201ENST00000369763 NBPF10Q6P3W6 841 aaKnown RBP12.74□□□□□ -0.37
LRIF1-201ENST00000369763 NBPF15Q8N660 670 aa12.74□□□□□ -0.37
LRIF1-201ENST00000369763 MAST3O60307 1309 aa12.73□□□□□ -0.37
LRIF1-201ENST00000369763 A0A0G2JS52 829 aa12.73□□□□□ -0.37
LRIF1-201ENST00000369763 KLF18A0A0U1RQI7 1052 aa12.73□□□□□ -0.37
LRIF1-201ENST00000369763 GOLGA8BA8MQT2 603 aa12.73□□□□□ -0.37
LRIF1-201ENST00000369763 GOLGA8FQ08AF8 430 aa12.73□□□□□ -0.37
LRIF1-201ENST00000369763 GOLGA8DPQ0D2H9 430 aa12.73□□□□□ -0.37
LRIF1-201ENST00000369763 TAF7LQ5H9L4 462 aa12.73□□□□□ -0.37
LRIF1-201ENST00000369763 ILDR1Q86SU0 546 aaPredicted RBP12.73□□□□□ -0.37
LRIF1-201ENST00000369763 TMX1Q9H3N1 280 aa12.73□□□□□ -0.37
LRIF1-201ENST00000369763 LTN1O94822 1766 aa12.73□□□□□ -0.37
LRIF1-201ENST00000369763 CACNA1FO60840 1977 aa12.73□□□□□ -0.37
LRIF1-201ENST00000369763 SCARF1Q14162 830 aa12.73□□□□□ -0.37
LRIF1-201ENST00000369763 ATG9AQ7Z3C6 839 aa12.73□□□□□ -0.37
LRIF1-201ENST00000369763 LMOD1P29536 600 aaPredicted RBP12.72□□□□□ -0.37
LRIF1-201ENST00000369763 PTPN14Q15678 1187 aa12.72□□□□□ -0.37
LRIF1-201ENST00000369763 FAM177A1Q8N128 213 aaPredicted RBP12.72□□□□□ -0.37
LRIF1-201ENST00000369763 CCDC82Q8N4S0 544 aa12.72□□□□□ -0.37
LRIF1-201ENST00000369763 FAM89AQ96GI7 184 aa12.72□□□□□ -0.37
LRIF1-201ENST00000369763 ZNF215Q9UL58 517 aaPredicted RBP12.72□□□□□ -0.37
LRIF1-201ENST00000369763 HEG1Q9ULI3 1381 aa12.72□□□□□ -0.37
LRIF1-201ENST00000369763 TSGA10IPQ3SY00 556 aa12.72□□□□□ -0.37
LRIF1-201ENST00000369763 TMC6Q7Z403 805 aa12.72□□□□□ -0.37
LRIF1-201ENST00000369763 DHX40Q8IX18 779 aaKnown RBP12.72□□□□□ -0.37
LRIF1-201ENST00000369763 SMAP1Q8IYB5 467 aaPredicted RBP12.72□□□□□ -0.37
LRIF1-201ENST00000369763 C8orf76Q96K31 380 aa12.72□□□□□ -0.37
LRIF1-201ENST00000369763 INCENPQ9NQS7 918 aa12.72□□□□□ -0.37
LRIF1-201ENST00000369763 FDPSP14324 419 aaKnown RBP12.72□□□□□ -0.37
LRIF1-201ENST00000369763 CEP57L1Q8IYX8 460 aa12.72□□□□□ -0.37
LRIF1-201ENST00000369763 ORC3Q9UBD5 711 aaPredicted RBP12.72□□□□□ -0.37
LRIF1-201ENST00000369763 KDM6AO15550 1401 aaPredicted RBP12.71□□□□□ -0.37
LRIF1-201ENST00000369763 UBE2Q2LH0YL09 131 aa12.71□□□□□ -0.37
LRIF1-201ENST00000369763 GPTP24298 496 aa12.71□□□□□ -0.37
LRIF1-201ENST00000369763 FOXO4P98177 505 aa12.71□□□□□ -0.37
LRIF1-201ENST00000369763 FAM160A1Q05DH4 1040 aa12.71□□□□□ -0.37
LRIF1-201ENST00000369763 TTC39AQ5SRH9 613 aa12.71□□□□□ -0.37
LRIF1-201ENST00000369763 MYL10Q9BUA6 226 aa12.71□□□□□ -0.37
LRIF1-201ENST00000369763 IFNKQ9P0W0 207 aa12.71□□□□□ -0.37
LRIF1-201ENST00000369763 NFAT5O94916 1531 aa12.71□□□□□ -0.37
LRIF1-201ENST00000369763 SPECC1Q5M775 1068 aa12.71□□□□□ -0.37
LRIF1-201ENST00000369763 SMARCC2Q8TAQ2 1214 aa12.71□□□□□ -0.37
LRIF1-201ENST00000369763 ZNF396Q96N95 335 aaPredicted RBP12.71□□□□□ -0.37
LRIF1-201ENST00000369763 CWC25Q9NXE8 425 aaPredicted RBP12.71□□□□□ -0.37
LRIF1-201ENST00000369763 RCOR1Q9UKL0 485 aa12.71□□□□□ -0.37
LRIF1-201ENST00000369763 ARHGAP23Q9P227 1491 aa12.71□□□□□ -0.38
LRIF1-201ENST00000369763 ATP2B1P20020 1258 aa12.71□□□□□ -0.38
LRIF1-201ENST00000369763 GNL2Q13823 731 aaKnown RBP12.71□□□□□ -0.38
LRIF1-201ENST00000369763 RBM43Q6ZSC3 357 aaKnown RBP12.71□□□□□ -0.38
LRIF1-201ENST00000369763 LRP10Q7Z4F1 713 aa12.71□□□□□ -0.38
LRIF1-201ENST00000369763 ANO10Q9NW15 660 aa12.71□□□□□ -0.38
LRIF1-201ENST00000369763 CEP126Q9P2H0 1117 aa12.71□□□□□ -0.38
LRIF1-201ENST00000369763 RNF113AO15541 343 aaKnown RBP12.7□□□□□ -0.38
LRIF1-201ENST00000369763 PRC1O43663 620 aa12.7□□□□□ -0.38
LRIF1-201ENST00000369763 NKX2-3Q8TAU0 364 aa12.7□□□□□ -0.38
LRIF1-201ENST00000369763 MRPS27Q92552 414 aaKnown RBP12.7□□□□□ -0.38
LRIF1-201ENST00000369763 PHKBQ93100 1093 aa12.7□□□□□ -0.38
LRIF1-201ENST00000369763 PUS7LQ9H0K6 701 aaKnown RBP12.7□□□□□ -0.38
LRIF1-201ENST00000369763 CARMIL3Q8ND23 1372 aa12.7□□□□□ -0.38
LRIF1-201ENST00000369763 SMTNL1A8MU46 457 aa12.7□□□□□ -0.38
LRIF1-201ENST00000369763 FGAP02671 866 aa12.7□□□□□ -0.38
LRIF1-201ENST00000369763 ZAP70P43403 619 aa12.7□□□□□ -0.38
LRIF1-201ENST00000369763 ELF2Q15723 593 aa12.7□□□□□ -0.38
LRIF1-201ENST00000369763 SYNE3Q6ZMZ3 975 aa12.7□□□□□ -0.38
LRIF1-201ENST00000369763 PLBD2Q8NHP8 589 aa12.7□□□□□ -0.38
LRIF1-201ENST00000369763 ZMYM1Q5SVZ6 1142 aa12.7□□□□□ -0.38
LRIF1-201ENST00000369763 RALYLQ86SE5 291 aaKnown RBP12.7□□□□□ -0.38
LRIF1-201ENST00000369763 XPO4Q9C0E2 1151 aaKnown RBP12.7□□□□□ -0.38
LRIF1-201ENST00000369763 SLIT1O75093 1534 aa12.69□□□□□ -0.38
LRIF1-201ENST00000369763 KIF28PB7ZC32 967 aa12.69□□□□□ -0.38
LRIF1-201ENST00000369763 ATP1A3P13637 1013 aa12.69□□□□□ -0.38
LRIF1-201ENST00000369763 EXOSC10Q01780 885 aaKnown RBP12.69□□□□□ -0.38
LRIF1-201ENST00000369763 CCDC57Q2TAC2 916 aa12.69□□□□□ -0.38
LRIF1-201ENST00000369763 RABL6Q3YEC7 729 aaPredicted RBP12.69□□□□□ -0.38
LRIF1-201ENST00000369763 MICU3Q86XE3 530 aa12.69□□□□□ -0.38
LRIF1-201ENST00000369763 STRN4Q9NRL3 753 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms