RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 ACBD3Q9H3P7 528 aa14.19□□□□□ -0.14
PTPRK-203ENST00000368207 SYKP43405 635 aa14.19□□□□□ -0.14
PTPRK-203ENST00000368207 LUC7LQ9NQ29 371 aaKnown RBP14.19□□□□□ -0.14
PTPRK-203ENST00000368207 SEPT11Q9NVA2 429 aaKnown RBP14.19□□□□□ -0.14
PTPRK-203ENST00000368207 SYNMO15061 1565 aa14.19□□□□□ -0.14
PTPRK-203ENST00000368207 PARP10Q53GL7 1025 aa14.19□□□□□ -0.14
PTPRK-203ENST00000368207 CCDC87Q9NVE4 849 aa14.19□□□□□ -0.14
PTPRK-203ENST00000368207 KIF1BO60333 1816 aa14.19□□□□□ -0.14
PTPRK-203ENST00000368207 IGSF1Q8N6C5 1336 aa14.19□□□□□ -0.14
PTPRK-203ENST00000368207 UQCRHLA0A096LP55 91 aa14.19□□□□□ -0.14
PTPRK-203ENST00000368207 UQCRHP07919 91 aa14.19□□□□□ -0.14
PTPRK-203ENST00000368207 PROSER3Q2NL68 480 aa14.19□□□□□ -0.14
PTPRK-203ENST00000368207 LRSAM1Q6UWE0 723 aa14.19□□□□□ -0.14
PTPRK-203ENST00000368207 CUL5Q93034 780 aa14.19□□□□□ -0.14
PTPRK-203ENST00000368207 WDR78Q5VTH9 848 aa14.18□□□□□ -0.14
PTPRK-203ENST00000368207 SNX14Q9Y5W7 946 aa14.18□□□□□ -0.14
PTPRK-203ENST00000368207 ATP7BP35670 1465 aa14.18□□□□□ -0.14
PTPRK-203ENST00000368207 DCAF8L1A6NGE4 600 aa14.18□□□□□ -0.14
PTPRK-203ENST00000368207 ERVV-2B6SEH9 535 aa14.18□□□□□ -0.14
PTPRK-203ENST00000368207 SLC27A2O14975 620 aa14.18□□□□□ -0.14
PTPRK-203ENST00000368207 SSH3Q8TE77 659 aa14.18□□□□□ -0.14
PTPRK-203ENST00000368207 INTS4Q96HW7 963 aaKnown RBP14.18□□□□□ -0.14
PTPRK-203ENST00000368207 GSPT1P15170 499 aaKnown RBP14.18□□□□□ -0.14
PTPRK-203ENST00000368207 CNBD1Q8NA66 436 aa14.18□□□□□ -0.14
PTPRK-203ENST00000368207 TRMT1Q9NXH9 659 aaKnown RBP14.18□□□□□ -0.14
PTPRK-203ENST00000368207 GNAT2P19087 354 aa14.17□□□□□ -0.14
PTPRK-203ENST00000368207 PUM3Q15397 648 aaKnown RBP14.17□□□□□ -0.14
PTPRK-203ENST00000368207 SKIDA1Q1XH10 827 aa14.17□□□□□ -0.14
PTPRK-203ENST00000368207 HSP90AA4PQ58FG1 418 aa14.17□□□□□ -0.14
PTPRK-203ENST00000368207 BEND3Q5T5X7 828 aa14.17□□□□□ -0.14
PTPRK-203ENST00000368207 CNKSR2Q8WXI2 1034 aa14.17□□□□□ -0.14
PTPRK-203ENST00000368207 HELLSQ9NRZ9 838 aa14.17□□□□□ -0.14
PTPRK-203ENST00000368207 HEATR3Q7Z4Q2 680 aa14.17□□□□□ -0.14
PTPRK-203ENST00000368207 KBTBD3Q8NAB2 608 aa14.17□□□□□ -0.14
PTPRK-203ENST00000368207 LDHBP07195 334 aaKnown RBP14.17□□□□□ -0.14
PTPRK-203ENST00000368207 KCNG4Q8TDN1 519 aa14.17□□□□□ -0.14
PTPRK-203ENST00000368207 MRPS27Q92552 414 aaKnown RBP14.17□□□□□ -0.14
PTPRK-203ENST00000368207 B4E1Z4 1266 aa14.17□□□□□ -0.14
PTPRK-203ENST00000368207 AFMP43652 599 aa14.17□□□□□ -0.14
PTPRK-203ENST00000368207 TCIRG1Q13488 830 aa14.17□□□□□ -0.14
PTPRK-203ENST00000368207 KIAA1328Q86T90 577 aa14.17□□□□□ -0.14
PTPRK-203ENST00000368207 XRCC6P12956 609 aaKnown RBP eCLIP14.16□□□□□ -0.14
PTPRK-203ENST00000368207 TNIP1Q15025 636 aa14.16□□□□□ -0.14
PTPRK-203ENST00000368207 PTPN14Q15678 1187 aa14.16□□□□□ -0.14
PTPRK-203ENST00000368207 ENOX2Q16206 610 aaKnown RBP14.16□□□□□ -0.14
PTPRK-203ENST00000368207 CCDC181Q5TID7 509 aa14.16□□□□□ -0.14
PTPRK-203ENST00000368207 TMC6Q7Z403 805 aa14.16□□□□□ -0.14
PTPRK-203ENST00000368207 EAF2Q96CJ1 260 aaPredicted RBP14.16□□□□□ -0.14
PTPRK-203ENST00000368207 ANKRD2Q9GZV1 360 aa14.16□□□□□ -0.14
PTPRK-203ENST00000368207 NPHP4O75161 1426 aaPredicted RBP14.16□□□□□ -0.14
PTPRK-203ENST00000368207 PRAMEF22A3QJZ6 481 aa14.16□□□□□ -0.14
PTPRK-203ENST00000368207 ARMT1Q9H993 441 aa14.16□□□□□ -0.14
PTPRK-203ENST00000368207 GPAA1O43292 621 aa14.16□□□□□ -0.14
PTPRK-203ENST00000368207 FAM173BQ6P4H8 233 aa14.16□□□□□ -0.14
PTPRK-203ENST00000368207 MATR3P43243 847 aaKnown RBP eCLIP14.15□□□□□ -0.142e-6■■■□□ 19
PTPRK-203ENST00000368207 TTLL12Q14166 644 aaPredicted RBP14.15□□□□□ -0.14
PTPRK-203ENST00000368207 CALML4Q96GE6 196 aa14.15□□□□□ -0.14
PTPRK-203ENST00000368207 AOX1Q06278 1338 aa14.15□□□□□ -0.14
PTPRK-203ENST00000368207 RPS6KB1P23443 525 aa14.15□□□□□ -0.14
PTPRK-203ENST00000368207 ANO6Q4KMQ2 910 aa14.15□□□□□ -0.14
PTPRK-203ENST00000368207 APPBP2Q92624 585 aa14.15□□□□□ -0.14
PTPRK-203ENST00000368207 NCOA5Q9HCD5 579 aaKnown RBP14.15□□□□□ -0.14
PTPRK-203ENST00000368207 ZAP70P43403 619 aa14.15□□□□□ -0.14
PTPRK-203ENST00000368207 SPTLC2O15270 562 aa14.15□□□□□ -0.14
PTPRK-203ENST00000368207 PRDM1O75626 825 aa14.15□□□□□ -0.14
PTPRK-203ENST00000368207 TET3O43151 1660 aa14.14□□□□□ -0.15
PTPRK-203ENST00000368207 OGFOD1Q8N543 542 aa14.14□□□□□ -0.15
PTPRK-203ENST00000368207 PARP3Q9Y6F1 533 aa14.14□□□□□ -0.15
PTPRK-203ENST00000368207 CHMP4BP1P59074 171 aa14.14□□□□□ -0.15
PTPRK-203ENST00000368207 FKBP15Q5T1M5 1219 aa14.14□□□□□ -0.15
PTPRK-203ENST00000368207 WWC2Q6AWC2 1192 aa14.14□□□□□ -0.15
PTPRK-203ENST00000368207 MTERF4Q7Z6M4 381 aaKnown RBP14.14□□□□□ -0.15
PTPRK-203ENST00000368207 C16orf45Q96MC5 204 aaPredicted RBP14.14□□□□□ -0.15
PTPRK-203ENST00000368207 MAP7D2Q96T17 732 aa14.14□□□□□ -0.15
PTPRK-203ENST00000368207 DNAJC25Q9H1X3 360 aa14.14□□□□□ -0.15
PTPRK-203ENST00000368207 HIBADHP31937 336 aaKnown RBP14.14□□□□□ -0.15
PTPRK-203ENST00000368207 GNAQP50148 359 aa14.14□□□□□ -0.15
PTPRK-203ENST00000368207 CACNA2D4Q7Z3S7 1137 aa14.14□□□□□ -0.15
PTPRK-203ENST00000368207 SHROOM2Q13796 1616 aa14.13□□□□□ -0.15
PTPRK-203ENST00000368207 PRKCSHP14314 528 aaPredicted RBP14.13□□□□□ -0.15
PTPRK-203ENST00000368207 ERCC4Q92889 916 aaPredicted RBP14.13□□□□□ -0.15
PTPRK-203ENST00000368207 TSG101Q99816 390 aa14.13□□□□□ -0.15
PTPRK-203ENST00000368207 DENND2AQ9ULE3 1009 aa14.13□□□□□ -0.15
PTPRK-203ENST00000368207 UFL1O94874 794 aa14.13□□□□□ -0.15
PTPRK-203ENST00000368207 MTIF2P46199 727 aaKnown RBP14.13□□□□□ -0.15
PTPRK-203ENST00000368207 NAPAP54920 295 aa14.13□□□□□ -0.15
PTPRK-203ENST00000368207 ZNF397Q8NF99 534 aaPredicted RBP14.13□□□□□ -0.15
PTPRK-203ENST00000368207 ZNF830Q96NB3 372 aaPredicted RBP14.13□□□□□ -0.15
PTPRK-203ENST00000368207 ASAP1Q9ULH1 1129 aa14.13□□□□□ -0.15
PTPRK-203ENST00000368207 PPP1R12BO60237 982 aaPredicted RBP14.13□□□□□ -0.15
PTPRK-203ENST00000368207 LPIN2Q92539 896 aa14.13□□□□□ -0.15
PTPRK-203ENST00000368207 NUP88Q99567 741 aaPredicted RBP14.13□□□□□ -0.15
PTPRK-203ENST00000368207 USP21Q9UK80 565 aa14.13□□□□□ -0.15
PTPRK-203ENST00000368207 KIF24Q5T7B8 1368 aa14.13□□□□□ -0.15
PTPRK-203ENST00000368207 TRIM75PA6NK02 468 aa14.13□□□□□ -0.15
PTPRK-203ENST00000368207 IQGAP3Q86VI3 1631 aa14.12□□□□□ -0.15
PTPRK-203ENST00000368207 KDRP35968 1356 aa14.12□□□□□ -0.15
PTPRK-203ENST00000368207 CLTCL1P53675 1640 aa14.12□□□□□ -0.15
PTPRK-203ENST00000368207 MYO1BO43795 1136 aa14.12□□□□□ -0.15
PTPRK-203ENST00000368207 ZNF853P0CG23 659 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms