RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 NUP133Q8WUM0 1156 aa13.83□□□□□ -0.2
EPHB4-202ENST00000360620 LLPHQ9BRT6 129 aaKnown RBP13.83□□□□□ -0.2
EPHB4-202ENST00000360620 XPO4Q9C0E2 1151 aaKnown RBP13.83□□□□□ -0.2
EPHB4-202ENST00000360620 SHPRHQ149N8 1683 aa13.83□□□□□ -0.2
EPHB4-202ENST00000360620 ZSCAN20P17040 1043 aaPredicted RBP13.83□□□□□ -0.2
EPHB4-202ENST00000360620 POLA2Q14181 598 aa13.83□□□□□ -0.2
EPHB4-202ENST00000360620 C11orf57Q6ZUT1 292 aaPredicted RBP13.83□□□□□ -0.2
EPHB4-202ENST00000360620 ZBTB9Q96C00 473 aa13.83□□□□□ -0.2
EPHB4-202ENST00000360620 TSPYL1Q9H0U9 437 aa13.83□□□□□ -0.2
EPHB4-202ENST00000360620 ARID5BQ14865 1188 aa13.82□□□□□ -0.2
EPHB4-202ENST00000360620 NAA16Q6N069 864 aaPredicted RBP13.82□□□□□ -0.2
EPHB4-202ENST00000360620 DDX21Q9NR30 783 aaKnown RBP eCLIP13.82□□□□□ -0.2
EPHB4-202ENST00000360620 CNNM1Q9NRU3 951 aa13.82□□□□□ -0.2
EPHB4-202ENST00000360620 PAG1Q9NWQ8 432 aa13.82□□□□□ -0.2
EPHB4-202ENST00000360620 IGSF1Q8N6C5 1336 aa13.82□□□□□ -0.2
EPHB4-202ENST00000360620 CHRNA2Q15822 529 aa13.82□□□□□ -0.2
EPHB4-202ENST00000360620 NCOA7Q8NI08 942 aa13.82□□□□□ -0.2
EPHB4-202ENST00000360620 SEC62Q99442 399 aaKnown RBP13.82□□□□□ -0.2
EPHB4-202ENST00000360620 CARD6Q9BX69 1037 aa13.82□□□□□ -0.2
EPHB4-202ENST00000360620 DIP2CQ9Y2E4 1556 aa13.82□□□□□ -0.2
EPHB4-202ENST00000360620 EVCP57679 992 aa13.81□□□□□ -0.2
EPHB4-202ENST00000360620 MCM6Q14566 821 aa13.81□□□□□ -0.2
EPHB4-202ENST00000360620 AXDND1Q5T1B0 1012 aaPredicted RBP13.81□□□□□ -0.2
EPHB4-202ENST00000360620 ZFP91Q96JP5 570 aaPredicted RBP13.81□□□□□ -0.2
EPHB4-202ENST00000360620 FTOQ9C0B1 505 aaKnown RBP eCLIP13.81□□□□□ -0.2
EPHB4-202ENST00000360620 TLR7Q9NYK1 1049 aaKnown RBP13.81□□□□□ -0.2
EPHB4-202ENST00000360620 LMTK2Q8IWU2 1503 aa13.81□□□□□ -0.2
EPHB4-202ENST00000360620 TULP1O00294 542 aaPredicted RBP13.81□□□□□ -0.2
EPHB4-202ENST00000360620 TNNI3KQ59H18 835 aa13.81□□□□□ -0.2
EPHB4-202ENST00000360620 ZNF589Q86UQ0 364 aaPredicted RBP13.81□□□□□ -0.2
EPHB4-202ENST00000360620 TXLNBQ8N3L3 684 aa13.81□□□□□ -0.2
EPHB4-202ENST00000360620 ALG1Q9BT22 464 aa13.81□□□□□ -0.2
EPHB4-202ENST00000360620 BRMS1Q9HCU9 246 aa13.81□□□□□ -0.2
EPHB4-202ENST00000360620 IMPACTQ9P2X3 320 aa13.81□□□□□ -0.2
EPHB4-202ENST00000360620 FPGT-TNNI3KV9GXZ4 949 aa13.81□□□□□ -0.2
EPHB4-202ENST00000360620 PPLO60437 1756 aa13.81□□□□□ -0.2
EPHB4-202ENST00000360620 METAP2P50579 478 aaKnown RBP eCLIP13.81□□□□□ -0.29e-7■■■□□ 14.6
EPHB4-202ENST00000360620 RUFY1Q96T51 708 aa13.81□□□□□ -0.2
EPHB4-202ENST00000360620 TMEM2Q9UHN6 1383 aa13.81□□□□□ -0.2
EPHB4-202ENST00000360620 PRC1O43663 620 aa13.8□□□□□ -0.2
EPHB4-202ENST00000360620 IARSP41252 1262 aaKnown RBP13.8□□□□□ -0.2
EPHB4-202ENST00000360620 FANCCQ00597 558 aa13.8□□□□□ -0.2
EPHB4-202ENST00000360620 RNMTO43148 476 aaKnown RBP13.8□□□□□ -0.2
EPHB4-202ENST00000360620 MYL5Q02045 173 aa13.8□□□□□ -0.2
EPHB4-202ENST00000360620 ANKRD24Q8TF21 1146 aa13.8□□□□□ -0.2
EPHB4-202ENST00000360620 NEURL4Q96JN8 1562 aa13.8□□□□□ -0.2
EPHB4-202ENST00000360620 PTPRMP28827 1452 aa13.8□□□□□ -0.2
EPHB4-202ENST00000360620 TAF5LO75529 589 aa13.8□□□□□ -0.2
EPHB4-202ENST00000360620 SYCP1Q15431 976 aa13.8□□□□□ -0.2
EPHB4-202ENST00000360620 NOC3LQ8WTT2 800 aaKnown RBP13.8□□□□□ -0.2
EPHB4-202ENST00000360620 GOLGA8AA7E2F4 631 aa13.79□□□□□ -0.2
EPHB4-202ENST00000360620 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.79□□□□□ -0.26e-6■□□□□ 9.8
EPHB4-202ENST00000360620 ZNF202O95125 648 aa13.79□□□□□ -0.2
EPHB4-202ENST00000360620 TIMM10P62072 90 aa13.79□□□□□ -0.2
EPHB4-202ENST00000360620 KARSQ15046 597 aaKnown RBP13.79□□□□□ -0.2
EPHB4-202ENST00000360620 CCDC144BQ3MJ40 725 aa13.79□□□□□ -0.2
EPHB4-202ENST00000360620 NBPF6Q5VWK0 638 aa13.79□□□□□ -0.2
EPHB4-202ENST00000360620 NBPF4Q96M43 638 aa13.79□□□□□ -0.2
EPHB4-202ENST00000360620 GBP3Q9H0R5 595 aa13.79□□□□□ -0.2
EPHB4-202ENST00000360620 ZBTB3Q9H5J0 574 aa13.79□□□□□ -0.2
EPHB4-202ENST00000360620 KIAA1468Q9P260 1216 aa13.79□□□□□ -0.2
EPHB4-202ENST00000360620 AKAP2Q9Y2D5 859 aa13.79□□□□□ -0.2
EPHB4-202ENST00000360620 ARHGEF40Q8TER5 1519 aa13.79□□□□□ -0.2
EPHB4-202ENST00000360620 RIMBP3CA6NJZ7 1639 aa13.79□□□□□ -0.2
EPHB4-202ENST00000360620 RIMBP3BA6NNM3 1639 aa13.79□□□□□ -0.2
EPHB4-202ENST00000360620 RIMBP3Q9UFD9 1639 aa13.79□□□□□ -0.2
EPHB4-202ENST00000360620 BRAPQ7Z569 592 aa13.79□□□□□ -0.2
EPHB4-202ENST00000360620 WASF1Q92558 559 aa13.79□□□□□ -0.2
EPHB4-202ENST00000360620 AIDAQ96BJ3 306 aa13.79□□□□□ -0.2
EPHB4-202ENST00000360620 SCRN1Q12765 414 aa13.78□□□□□ -0.2
EPHB4-202ENST00000360620 IP6K1Q92551 441 aa13.78□□□□□ -0.2
EPHB4-202ENST00000360620 PGBD1Q96JS3 809 aa13.78□□□□□ -0.2
EPHB4-202ENST00000360620 DDX41Q9UJV9 622 aaKnown RBP13.78□□□□□ -0.2
EPHB4-202ENST00000360620 CDC25BP30305 580 aa13.78□□□□□ -0.2
EPHB4-202ENST00000360620 FAM193AP78312 1265 aa13.78□□□□□ -0.2
EPHB4-202ENST00000360620 METTL24Q5JXM2 366 aa13.78□□□□□ -0.2
EPHB4-202ENST00000360620 KBTBD3Q8NAB2 608 aa13.78□□□□□ -0.2
EPHB4-202ENST00000360620 SIRT1Q96EB6 747 aa13.78□□□□□ -0.2
EPHB4-202ENST00000360620 SNRPA1P09661 255 aaKnown RBP13.78□□□□□ -0.2
EPHB4-202ENST00000360620 PROSER3Q2NL68 480 aa13.78□□□□□ -0.2
EPHB4-202ENST00000360620 HSP90AB3PQ58FF7 597 aa13.78□□□□□ -0.2
EPHB4-202ENST00000360620 FBXO38Q6PIJ6 1188 aa13.78□□□□□ -0.2
EPHB4-202ENST00000360620 MYO3AQ8NEV4 1616 aa13.77□□□□□ -0.2
EPHB4-202ENST00000360620 A2ML1A8K2U0 1454 aa13.77□□□□□ -0.2
EPHB4-202ENST00000360620 ATP5JP18859 108 aa13.77□□□□□ -0.2
EPHB4-202ENST00000360620 ETF1P62495 437 aaKnown RBP13.77□□□□□ -0.2
EPHB4-202ENST00000360620 CCDC47Q96A33 483 aaKnown RBP13.77□□□□□ -0.2
EPHB4-202ENST00000360620 ZC3H13Q5T200 1668 aaKnown RBP13.77□□□□□ -0.2
EPHB4-202ENST00000360620 ARHGAP31Q2M1Z3 1444 aa13.77□□□□□ -0.2
EPHB4-202ENST00000360620 CYP21A2P08686 494 aa13.77□□□□□ -0.21
EPHB4-202ENST00000360620 ATF3P18847 181 aa13.77□□□□□ -0.21
EPHB4-202ENST00000360620 TDO2P48775 406 aa13.77□□□□□ -0.21
EPHB4-202ENST00000360620 SETQ01105 290 aaPredicted RBP13.77□□□□□ -0.21
EPHB4-202ENST00000360620 ANO1Q5XXA6 986 aa13.77□□□□□ -0.21
EPHB4-202ENST00000360620 ADALQ6DHV7 355 aa13.77□□□□□ -0.21
EPHB4-202ENST00000360620 PLA2G4DQ86XP0 818 aa13.77□□□□□ -0.21
EPHB4-202ENST00000360620 SLC26A6Q9BXS9 759 aa13.77□□□□□ -0.21
EPHB4-202ENST00000360620 SLC12A7Q9Y666 1083 aa13.77□□□□□ -0.21
EPHB4-202ENST00000360620 CAMSAP1Q5T5Y3 1602 aa13.77□□□□□ -0.21
EPHB4-202ENST00000360620 IFIT3O14879 490 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms