RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 MCMDC2Q4G0Z9 681 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 CCDC121Q6ZUS5 278 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 UBE3BQ7Z3V4 1068 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 AFAP1L2Q8N4X5 818 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 GUCY1B3Q02153 619 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 SEL1L2Q5TEA6 688 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 RALGAPBQ86X10 1494 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 ITSN2Q9NZM3 1697 aa10.94□□□□□ -0.66
CUX1-203ENST00000360264 STX10O60499 249 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 TPD52P55327 224 aaPredicted RBP10.93□□□□□ -0.66
CUX1-203ENST00000360264 CCDC144CPQ8IYA2 1237 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 MPNDQ8N594 471 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 NEK11Q8NG66 645 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 CCDC42Q96M95 316 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 ANKRD13DQ6ZTN6 518 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 NME9Q86XW9 330 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 ARFGAP3Q9NP61 516 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 SYNJ1O43426 1573 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 KRT28Q7Z3Y7 464 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 NPHP3Q7Z494 1330 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 CIB2O75838 187 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 SH2D4AQ9H788 454 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 MAP7Q14244 749 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 SRGAP1Q7Z6B7 1085 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 KCNG1Q9UIX4 513 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 FAM169AQ9Y6X4 670 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 JDP2Q8WYK2 163 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 CACYBPQ9HB71 228 aaKnown RBP10.93□□□□□ -0.66
CUX1-203ENST00000360264 IL15P40933 162 aaPredicted RBP10.93□□□□□ -0.66
CUX1-203ENST00000360264 A6NNZ2 444 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 KRT86O43790 486 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 TUBB8Q3ZCM7 444 aa10.93□□□□□ -0.66
CUX1-203ENST00000360264 WDR97A6NE52 1622 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 SEPT6Q14141 434 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 TRIM14Q14142 442 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 IFT74Q96LB3 600 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 KRT222Q8N1A0 295 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.92□□□□□ -0.66
CUX1-203ENST00000360264 ARAP1Q96P48 1450 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 DKC1O60832 514 aaKnown RBP eCLIP10.92□□□□□ -0.661e-7■■■■■ 34.5
CUX1-203ENST00000360264 VAV2P52735 878 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 SAMD15Q9P1V8 674 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 KRT2P35908 639 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 HAUS3Q68CZ6 603 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 TICAM2Q86XR7 235 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 TCHPQ9BT92 498 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 SLC4A4Q9Y6R1 1079 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 CRCPO75575 148 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 FOXO3O43524 673 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 GPTP24298 496 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 CCDC94Q9BW85 323 aaPredicted RBP10.92□□□□□ -0.66
CUX1-203ENST00000360264 HMGXB3Q12766 1538 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 TRIM75PA6NK02 468 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 TUBB2AQ13885 445 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 RILPL1Q5EBL4 403 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 CFAP157Q5JU67 520 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 CCDC63Q8NA47 563 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 TUBB2BQ9BVA1 445 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 CDCA7Q9BWT1 371 aaPredicted RBP10.92□□□□□ -0.66
CUX1-203ENST00000360264 EXOC7Q9UPT5 735 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 PSMC4P43686 418 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 NBPF8Q3BBV2 869 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 GOLGA1Q92805 767 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 ARHGAP45Q92619 1136 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 ALG1Q9BT22 464 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 TMOD4Q9NZQ9 345 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 ZBTB24O43167 697 aaPredicted RBP10.92□□□□□ -0.66
CUX1-203ENST00000360264 TRIM27P14373 513 aa10.92□□□□□ -0.66
CUX1-203ENST00000360264 TBC1D31Q96DN5 1066 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 PI4KAP2A4QPH2 592 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 PI4KAP1Q8N8J0 262 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 CCDC26Q8TAB7 109 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 EIF2AK4Q9P2K8 1649 aaKnown RBP10.91□□□□□ -0.66
CUX1-203ENST00000360264 ANKRD36BQ8N2N9 1353 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 E7EVH7 732 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 BIN1O00499 593 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 TBC1D9Q6ZT07 1266 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 HEATR3Q7Z4Q2 680 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 FRMD4BQ9Y2L6 1034 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 ATP6V0A2Q9Y487 856 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 CC2D2AQ9P2K1 1620 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 VWA3BQ502W6 1294 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 SOS1Q07889 1333 aaPredicted RBP10.91□□□□□ -0.66
CUX1-203ENST00000360264 GPR161Q8N6U8 529 aaKnown RBP10.91□□□□□ -0.66
CUX1-203ENST00000360264 HAUS7Q99871 368 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 MTUS1Q9ULD2 1270 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 KIFC2Q96AC6 838 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 BAZ2BQ9UIF8 2168 aaKnown RBP10.91□□□□□ -0.66
CUX1-203ENST00000360264 ATL3Q6DD88 541 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 CCDC50Q8IVM0 306 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 MBIPQ9NS73 344 aa10.91□□□□□ -0.66
CUX1-203ENST00000360264 KLF18A0A0U1RQI7 1052 aa10.9□□□□□ -0.66
CUX1-203ENST00000360264 GIPC1O14908 333 aa10.9□□□□□ -0.66
CUX1-203ENST00000360264 HAND2P61296 217 aa10.9□□□□□ -0.66
CUX1-203ENST00000360264 TRIM7Q9C029 511 aa10.9□□□□□ -0.66
CUX1-203ENST00000360264 KMT5BQ4FZB7 885 aa10.9□□□□□ -0.66
CUX1-203ENST00000360264 IQUBQ8NA54 791 aa10.9□□□□□ -0.66
CUX1-203ENST00000360264 FAM200AQ8TCP9 573 aa10.9□□□□□ -0.66
CUX1-203ENST00000360264 TNNC1P63316 161 aa10.9□□□□□ -0.66
CUX1-203ENST00000360264 ATP2B3Q16720 1220 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms