RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 PDS5AQ29RF7 1337 aaKnown RBP20.68■□□□□ 0.9
VPS13B-201ENST00000355155 TM4SF1P30408 202 aa20.68■□□□□ 0.9
VPS13B-201ENST00000355155 UBE4AQ14139 1066 aa20.68■□□□□ 0.9
VPS13B-201ENST00000355155 SCARF1Q14162 830 aa20.68■□□□□ 0.9
VPS13B-201ENST00000355155 SLKQ9H2G2 1235 aaPredicted RBP20.68■□□□□ 0.9
VPS13B-201ENST00000355155 ANKRD18AQ8IVF6 992 aa20.67■□□□□ 0.9
VPS13B-201ENST00000355155 PROM2Q8N271 834 aa20.67■□□□□ 0.9
VPS13B-201ENST00000355155 CYP2E1P05181 493 aaPredicted RBP20.67■□□□□ 0.9
VPS13B-201ENST00000355155 GORABQ5T7V8 394 aa20.67■□□□□ 0.9
VPS13B-201ENST00000355155 ZSCAN25Q6NSZ9 544 aa20.67■□□□□ 0.9
VPS13B-201ENST00000355155 TAF1P21675 1872 aa20.66■□□□□ 0.9
VPS13B-201ENST00000355155 MYO5AQ9Y4I1 1855 aaKnown RBP20.66■□□□□ 0.9
VPS13B-201ENST00000355155 CHRNDQ07001 517 aa20.66■□□□□ 0.9
VPS13B-201ENST00000355155 KRT32Q14532 448 aa20.66■□□□□ 0.9
VPS13B-201ENST00000355155 NLRP3Q96P20 1036 aa20.66■□□□□ 0.9
VPS13B-201ENST00000355155 IGSF3O75054 1194 aa20.66■□□□□ 0.9
VPS13B-201ENST00000355155 ZKSCAN1P17029 563 aaPredicted RBP20.66■□□□□ 0.9
VPS13B-201ENST00000355155 ZAP70P43403 619 aa20.66■□□□□ 0.9
VPS13B-201ENST00000355155 NBPF5PQ86XG9 351 aaPredicted RBP20.66■□□□□ 0.9
VPS13B-201ENST00000355155 TMX3Q96JJ7 454 aa20.66■□□□□ 0.9
VPS13B-201ENST00000355155 MAST3O60307 1309 aa20.66■□□□□ 0.9
VPS13B-201ENST00000355155 PSMA5P28066 241 aa20.65■□□□□ 0.9
VPS13B-201ENST00000355155 NFIXQ14938 502 aa20.65■□□□□ 0.9
VPS13B-201ENST00000355155 UBE3CQ15386 1083 aa20.65■□□□□ 0.9
VPS13B-201ENST00000355155 APPBP2Q92624 585 aa20.65■□□□□ 0.9
VPS13B-201ENST00000355155 NDUFB9Q9Y6M9 179 aa20.65■□□□□ 0.9
VPS13B-201ENST00000355155 MAST2Q6P0Q8 1798 aa20.65■□□□□ 0.9
VPS13B-201ENST00000355155 GYS1P13807 737 aa20.65■□□□□ 0.9
VPS13B-201ENST00000355155 PRPF40BQ6NWY9 871 aaKnown RBP20.65■□□□□ 0.9
VPS13B-201ENST00000355155 AKT1S1Q96B36 256 aa20.65■□□□□ 0.9
VPS13B-201ENST00000355155 TRIM37O94972 964 aa20.64■□□□□ 0.9
VPS13B-201ENST00000355155 RUFY3Q7L099 469 aa20.64■□□□□ 0.9
VPS13B-201ENST00000355155 TXNRD1Q16881 649 aa20.64■□□□□ 0.89
VPS13B-201ENST00000355155 IRS2Q9Y4H2 1338 aa20.64■□□□□ 0.89
VPS13B-201ENST00000355155 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.63■□□□□ 0.89
VPS13B-201ENST00000355155 ADD2P35612 726 aa20.63■□□□□ 0.89
VPS13B-201ENST00000355155 PHKA1P46020 1223 aa20.63■□□□□ 0.89
VPS13B-201ENST00000355155 LTBP1Q14766 1721 aa20.63■□□□□ 0.89
VPS13B-201ENST00000355155 KLRG2A4D1S0 409 aaPredicted RBP20.63■□□□□ 0.89
VPS13B-201ENST00000355155 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.63■□□□□ 0.894e-7■■■■■ 35.9
VPS13B-201ENST00000355155 MINPP1Q9UNW1 487 aa20.63■□□□□ 0.89
VPS13B-201ENST00000355155 ZMYM6O95789 1325 aa20.63■□□□□ 0.89
VPS13B-201ENST00000355155 FAM177BA6PVY3 158 aa20.63■□□□□ 0.89
VPS13B-201ENST00000355155 CRY2Q49AN0 593 aa20.63■□□□□ 0.89
VPS13B-201ENST00000355155 TMED8Q6PL24 325 aaPredicted RBP20.63■□□□□ 0.89
VPS13B-201ENST00000355155 DUOX1Q9NRD9 1551 aa20.62■□□□□ 0.89
VPS13B-201ENST00000355155 TCRBV5S4A2TA0A5A2 114 aa20.62■□□□□ 0.89
VPS13B-201ENST00000355155 SMIM5Q71RC9 77 aa20.62■□□□□ 0.89
VPS13B-201ENST00000355155 ANKRD2Q9GZV1 360 aa20.62■□□□□ 0.89
VPS13B-201ENST00000355155 TIAM2Q8IVF5 1701 aa20.61■□□□□ 0.89
VPS13B-201ENST00000355155 SEMA3EO15041 775 aa20.61■□□□□ 0.89
VPS13B-201ENST00000355155 RXRBP28702 533 aa20.61■□□□□ 0.89
VPS13B-201ENST00000355155 ADCK5Q3MIX3 580 aa20.61■□□□□ 0.89
VPS13B-201ENST00000355155 FBXL16Q8N461 479 aa20.61■□□□□ 0.89
VPS13B-201ENST00000355155 OSBP2Q969R2 916 aa20.61■□□□□ 0.89
VPS13B-201ENST00000355155 ZSCAN31Q96LW9 406 aaPredicted RBP20.61■□□□□ 0.89
VPS13B-201ENST00000355155 SEC62Q99442 399 aaKnown RBP20.61■□□□□ 0.89
VPS13B-201ENST00000355155 CYP46A1Q9Y6A2 500 aa20.61■□□□□ 0.89
VPS13B-201ENST00000355155 ANKRD31Q8N7Z5 1873 aa20.61■□□□□ 0.89
VPS13B-201ENST00000355155 MYH13Q9UKX3 1938 aa20.61■□□□□ 0.89
VPS13B-201ENST00000355155 RPS8P62241 208 aaKnown RBP20.61■□□□□ 0.89
VPS13B-201ENST00000355155 NUCB2P80303 420 aa20.61■□□□□ 0.89
VPS13B-201ENST00000355155 M0R2C6 588 aa20.6■□□□□ 0.89
VPS13B-201ENST00000355155 FKBP4Q02790 459 aaKnown RBP eCLIP20.6■□□□□ 0.89
VPS13B-201ENST00000355155 C15orf52Q6ZUT6 534 aaKnown RBP20.6■□□□□ 0.89
VPS13B-201ENST00000355155 SPATA5Q8NB90 893 aa20.6■□□□□ 0.89
VPS13B-201ENST00000355155 LIMCH1Q9UPQ0 1083 aa20.6■□□□□ 0.89
VPS13B-201ENST00000355155 HSPD1P10809 573 aaKnown RBP20.6■□□□□ 0.89
VPS13B-201ENST00000355155 FOXP2O15409 715 aa20.59■□□□□ 0.89
VPS13B-201ENST00000355155 FLAD1Q8NFF5 587 aa20.59■□□□□ 0.89
VPS13B-201ENST00000355155 CELF1Q92879 486 aaKnown RBP20.59■□□□□ 0.89
VPS13B-201ENST00000355155 PIH1D3Q9NQM4 214 aaKnown RBP20.59■□□□□ 0.89
VPS13B-201ENST00000355155 SH2B1Q9NRF2 756 aaPredicted RBP20.59■□□□□ 0.89
VPS13B-201ENST00000355155 RPS6KB1P23443 525 aa20.59■□□□□ 0.89
VPS13B-201ENST00000355155 AK2P54819 239 aa20.59■□□□□ 0.89
VPS13B-201ENST00000355155 JAKMIP1Q96N16 626 aaKnown RBP20.59■□□□□ 0.89
VPS13B-201ENST00000355155 CACNA1SQ13698 1873 aa20.59■□□□□ 0.89
VPS13B-201ENST00000355155 CHGBP05060 677 aa20.59■□□□□ 0.89
VPS13B-201ENST00000355155 CASTP20810 708 aaKnown RBP20.59■□□□□ 0.89
VPS13B-201ENST00000355155 BICDL1Q6ZP65 573 aa20.59■□□□□ 0.89
VPS13B-201ENST00000355155 FBXO33Q7Z6M2 555 aa20.59■□□□□ 0.89
VPS13B-201ENST00000355155 UPF3BQ9BZI7 483 aaKnown RBP20.59■□□□□ 0.89
VPS13B-201ENST00000355155 RASGRF1Q13972 1273 aa20.58■□□□□ 0.89
VPS13B-201ENST00000355155 ANKRD1Q15327 319 aa20.58■□□□□ 0.89
VPS13B-201ENST00000355155 PRR5LQ6MZQ0 368 aa20.58■□□□□ 0.89
VPS13B-201ENST00000355155 CCDC129Q6ZRS4 1044 aa20.58■□□□□ 0.89
VPS13B-201ENST00000355155 HELBQ8NG08 1087 aaPredicted RBP20.58■□□□□ 0.88
VPS13B-201ENST00000355155 PDRG1Q9NUG6 133 aa20.58■□□□□ 0.88
VPS13B-201ENST00000355155 RGS17Q9UGC6 210 aaPredicted RBP20.58■□□□□ 0.88
VPS13B-201ENST00000355155 HMGB1P09429 215 aaKnown RBP20.57■□□□□ 0.88
VPS13B-201ENST00000355155 GTF2E1P29083 439 aaPredicted RBP20.57■□□□□ 0.88
VPS13B-201ENST00000355155 HOXA10P31260 410 aaPredicted RBP20.57■□□□□ 0.88
VPS13B-201ENST00000355155 GRAPQ13588 217 aa20.57■□□□□ 0.88
VPS13B-201ENST00000355155 ALX1Q15699 326 aa20.57■□□□□ 0.88
VPS13B-201ENST00000355155 CNBD1Q8NA66 436 aa20.57■□□□□ 0.88
VPS13B-201ENST00000355155 GRAPLQ8TC17 118 aaPredicted RBP20.57■□□□□ 0.88
VPS13B-201ENST00000355155 AGXT2Q9BYV1 514 aa20.57■□□□□ 0.88
VPS13B-201ENST00000355155 CYP21A2P08686 494 aa20.57■□□□□ 0.88
VPS13B-201ENST00000355155 COL1A1P02452 1464 aaPredicted RBP20.56■□□□□ 0.88
VPS13B-201ENST00000355155 CTNNA3Q9UI47 895 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms