RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 TBC1D22AQ8WUA7 517 aa11.25□□□□□ -0.61
GABPA-201ENST00000354828 LPIN2Q92539 896 aa11.25□□□□□ -0.61
GABPA-201ENST00000354828 LRRC2Q9BYS8 371 aa11.25□□□□□ -0.61
GABPA-201ENST00000354828 ZBTB1Q9Y2K1 713 aa11.25□□□□□ -0.61
GABPA-201ENST00000354828 UNC13BO14795 1591 aa11.25□□□□□ -0.61
GABPA-201ENST00000354828 RDXP35241 583 aaKnown RBP11.24□□□□□ -0.61
GABPA-201ENST00000354828 CCDC173Q0VFZ6 552 aa11.24□□□□□ -0.61
GABPA-201ENST00000354828 RTN1Q16799 776 aa11.24□□□□□ -0.61
GABPA-201ENST00000354828 DESP17661 470 aa11.24□□□□□ -0.61
GABPA-201ENST00000354828 CEP85Q6P2H3 762 aa11.24□□□□□ -0.61
GABPA-201ENST00000354828 BRF1Q92994 677 aa11.24□□□□□ -0.61
GABPA-201ENST00000354828 CSADQ9Y600 493 aa11.24□□□□□ -0.61
GABPA-201ENST00000354828 USP6P35125 1406 aa11.24□□□□□ -0.61
GABPA-201ENST00000354828 NAPAP54920 295 aa11.24□□□□□ -0.61
GABPA-201ENST00000354828 TNFAIP1Q13829 316 aa11.24□□□□□ -0.61
GABPA-201ENST00000354828 CALML4Q96GE6 196 aa11.24□□□□□ -0.61
GABPA-201ENST00000354828 DEF6Q9H4E7 631 aa11.24□□□□□ -0.61
GABPA-201ENST00000354828 ARHGEF10LQ9HCE6 1279 aa11.24□□□□□ -0.61
GABPA-201ENST00000354828 TTF2Q9UNY4 1162 aaKnown RBP11.24□□□□□ -0.61
GABPA-201ENST00000354828 ZBTB7AO95365 584 aa11.24□□□□□ -0.61
GABPA-201ENST00000354828 NMIQ13287 307 aaPredicted RBP11.24□□□□□ -0.61
GABPA-201ENST00000354828 SPDYE3A6NKU9 549 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 MFSD14BQ5SR56 506 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 CCDC148Q8NFR7 591 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 MROH5Q6ZUA9 1318 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 SYNMO15061 1565 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 NBPF7P0C2Y1 421 aaPredicted RBP11.23□□□□□ -0.61
GABPA-201ENST00000354828 USP48Q86UV5 1035 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 SKAP1Q86WV1 359 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 SUCLG2Q96I99 432 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 FBXO3Q9UK99 471 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 ANKARQ7Z5J8 1434 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 ARHGEF40Q8TER5 1519 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 IDEP14735 1019 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 ATP2B4P23634 1241 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 CTSWP56202 376 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 TBC1D9Q6ZT07 1266 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 SMCR8Q8TEV9 937 aaPredicted RBP11.23□□□□□ -0.61
GABPA-201ENST00000354828 BACH2Q9BYV9 841 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 AATFQ9NY61 560 aaKnown RBP eCLIP11.23□□□□□ -0.61
GABPA-201ENST00000354828 TTC41PQ6P2S7 1318 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 LMTK2Q8IWU2 1503 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 PTPRMP28827 1452 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 IL6STP40189 918 aaPredicted RBP11.23□□□□□ -0.61
GABPA-201ENST00000354828 NOM1Q5C9Z4 860 aaKnown RBP11.23□□□□□ -0.61
GABPA-201ENST00000354828 BMP2KLQ5H9B9 411 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 RBM8AQ9Y5S9 174 aaKnown RBP11.23□□□□□ -0.61
GABPA-201ENST00000354828 ADGRB3O60242 1522 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 SDSP20132 328 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 DALRD3Q5D0E6 543 aaKnown RBP11.23□□□□□ -0.61
GABPA-201ENST00000354828 KIAA0825Q8IV33 1275 aa11.23□□□□□ -0.61
GABPA-201ENST00000354828 ATP7BP35670 1465 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 MAP3K15Q6ZN16 1313 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 UBA7P41226 1012 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 HDAC1Q13547 482 aaPredicted RBP11.22□□□□□ -0.61
GABPA-201ENST00000354828 PPFIBP1Q86W92 1011 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 RRP36Q96EU6 259 aaKnown RBP11.22□□□□□ -0.61
GABPA-201ENST00000354828 DRC1Q96MC2 740 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 TCEANC2Q96MN5 208 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 DBNDD2Q9BQY9 259 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 TNNQ9UQP3 1299 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 CLTCL1P53675 1640 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 INO80Q9ULG1 1556 aaPredicted RBP11.22□□□□□ -0.61
GABPA-201ENST00000354828 MMP10P09238 476 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 EN1Q05925 392 aaPredicted RBP11.22□□□□□ -0.61
GABPA-201ENST00000354828 TNNI3KQ59H18 835 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 FPGT-TNNI3KV9GXZ4 949 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 CCDC192P0DO97 292 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 TEKT1Q969V4 418 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 TSG101Q99816 390 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 TRIM35Q9UPQ4 493 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 NEBLO76041 1014 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 NUCB1Q02818 461 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 ERMNQ8TAM6 284 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 ARID3AQ99856 593 aa11.22□□□□□ -0.61
GABPA-201ENST00000354828 PSDA5PKW4 1024 aaPredicted RBP11.21□□□□□ -0.61
GABPA-201ENST00000354828 PPEF1O14829 653 aaPredicted RBP11.21□□□□□ -0.61
GABPA-201ENST00000354828 IGHDP01880 384 aa11.21□□□□□ -0.61
GABPA-201ENST00000354828 IRX3P78415 501 aaPredicted RBP11.21□□□□□ -0.61
GABPA-201ENST00000354828 SP4Q02446 784 aa11.21□□□□□ -0.61
GABPA-201ENST00000354828 CCDC150Q8NCX0 1101 aa11.21□□□□□ -0.61
GABPA-201ENST00000354828 ARMT1Q9H993 441 aa11.21□□□□□ -0.61
GABPA-201ENST00000354828 LUC7LQ9NQ29 371 aaKnown RBP11.21□□□□□ -0.61
GABPA-201ENST00000354828 NOD1Q9Y239 953 aa11.21□□□□□ -0.61
GABPA-201ENST00000354828 PIGBQ92521 554 aa11.21□□□□□ -0.61
GABPA-201ENST00000354828 NEURL1BA8MQ27 555 aa11.21□□□□□ -0.62
GABPA-201ENST00000354828 PRC1O43663 620 aa11.21□□□□□ -0.62
GABPA-201ENST00000354828 KIF20AO95235 890 aa11.21□□□□□ -0.62
GABPA-201ENST00000354828 POTEJP0CG39 1038 aa11.21□□□□□ -0.62
GABPA-201ENST00000354828 CALM1P0DP23 149 aa11.21□□□□□ -0.62
GABPA-201ENST00000354828 CALM2P0DP24 149 aa11.21□□□□□ -0.62
GABPA-201ENST00000354828 CALM3P0DP25 149 aa11.21□□□□□ -0.62
GABPA-201ENST00000354828 BICD1Q96G01 975 aa11.21□□□□□ -0.62
GABPA-201ENST00000354828 TSPY26PQ9H489 355 aa11.21□□□□□ -0.62
GABPA-201ENST00000354828 PCDHB15Q9Y5E8 787 aa11.21□□□□□ -0.62
GABPA-201ENST00000354828 PALLDQ8WX93 1383 aa11.21□□□□□ -0.62
GABPA-201ENST00000354828 USP40Q9NVE5 1235 aa11.21□□□□□ -0.62
GABPA-201ENST00000354828 RTL1A6NKG5 1358 aa11.2□□□□□ -0.62
GABPA-201ENST00000354828 ABCA6Q8N139 1617 aa11.2□□□□□ -0.62
GABPA-201ENST00000354828 KLHL10Q6JEL2 608 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms