RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 PDCL3Q9H2J4 239 aa22.49■■□□□ 1.19
LYSMD4-202ENST00000344791 GJB4Q9NTQ9 266 aa22.49■■□□□ 1.19
LYSMD4-202ENST00000344791 RNF113AO15541 343 aaKnown RBP22.49■■□□□ 1.19
LYSMD4-202ENST00000344791 PFKFB2O60825 505 aa22.49■■□□□ 1.19
LYSMD4-202ENST00000344791 TERF1P54274 439 aa22.49■■□□□ 1.19
LYSMD4-202ENST00000344791 KAT6BQ8WYB5 2073 aa22.49■■□□□ 1.19
LYSMD4-202ENST00000344791 CCAR1Q8IX12 1150 aaKnown RBP22.48■■□□□ 1.19
LYSMD4-202ENST00000344791 HELLSQ9NRZ9 838 aa22.48■■□□□ 1.19
LYSMD4-202ENST00000344791 ME1P48163 572 aa22.48■■□□□ 1.19
LYSMD4-202ENST00000344791 CFAP45Q9UL16 551 aa22.48■■□□□ 1.19
LYSMD4-202ENST00000344791 CCDC191Q8NCU4 936 aa22.48■■□□□ 1.19
LYSMD4-202ENST00000344791 GOLPH3LQ9H4A5 285 aa22.47■■□□□ 1.19
LYSMD4-202ENST00000344791 KIF1AQ12756 1690 aa22.47■■□□□ 1.19
LYSMD4-202ENST00000344791 POLR3DP05423 398 aaPredicted RBP22.47■■□□□ 1.19
LYSMD4-202ENST00000344791 PDIA3P30101 505 aaKnown RBP22.47■■□□□ 1.19
LYSMD4-202ENST00000344791 XAGE2Q96GT9 111 aa22.47■■□□□ 1.19
LYSMD4-202ENST00000344791 EVA1CP58658 441 aa22.46■■□□□ 1.19
LYSMD4-202ENST00000344791 CCDC158Q5M9N0 1113 aa22.46■■□□□ 1.19
LYSMD4-202ENST00000344791 DSCC1Q9BVC3 393 aa22.46■■□□□ 1.19
LYSMD4-202ENST00000344791 ZSCAN16Q9H4T2 348 aaPredicted RBP22.46■■□□□ 1.19
LYSMD4-202ENST00000344791 GOLGA6L6A8MZA4 724 aa22.46■■□□□ 1.19
LYSMD4-202ENST00000344791 HMGB1P09429 215 aaKnown RBP22.46■■□□□ 1.19
LYSMD4-202ENST00000344791 PDIA4P13667 645 aaKnown RBP22.46■■□□□ 1.19
LYSMD4-202ENST00000344791 ZAP70P43403 619 aa22.46■■□□□ 1.19
LYSMD4-202ENST00000344791 SMARCC2Q8TAQ2 1214 aa22.46■■□□□ 1.19
LYSMD4-202ENST00000344791 WDR17Q8IZU2 1322 aa22.45■■□□□ 1.18
LYSMD4-202ENST00000344791 A0A0G2JS52 829 aa22.45■■□□□ 1.18
LYSMD4-202ENST00000344791 EXOSC10Q01780 885 aaKnown RBP22.45■■□□□ 1.18
LYSMD4-202ENST00000344791 C11orf57Q6ZUT1 292 aaPredicted RBP22.45■■□□□ 1.18
LYSMD4-202ENST00000344791 KIAA1524Q8TCG1 905 aa22.45■■□□□ 1.18
LYSMD4-202ENST00000344791 ASAP1Q9ULH1 1129 aa22.45■■□□□ 1.18
LYSMD4-202ENST00000344791 PALLDQ8WX93 1383 aa22.45■■□□□ 1.18
LYSMD4-202ENST00000344791 DYNC1I1O14576 645 aa22.44■■□□□ 1.18
LYSMD4-202ENST00000344791 IL2RBP14784 551 aa22.44■■□□□ 1.18
LYSMD4-202ENST00000344791 BRINP3Q76B58 766 aa22.44■■□□□ 1.18
LYSMD4-202ENST00000344791 DNAJC10Q8IXB1 793 aa22.44■■□□□ 1.18
LYSMD4-202ENST00000344791 PUS7LQ9H0K6 701 aaKnown RBP22.44■■□□□ 1.18
LYSMD4-202ENST00000344791 DENND2AQ9ULE3 1009 aa22.44■■□□□ 1.18
LYSMD4-202ENST00000344791 ADAMTSL3P82987 1691 aa22.44■■□□□ 1.18
LYSMD4-202ENST00000344791 ADD1P35611 737 aaKnown RBP22.44■■□□□ 1.18
LYSMD4-202ENST00000344791 COL18A1P39060 1754 aa22.43■■□□□ 1.18
LYSMD4-202ENST00000344791 RXRAP19793 462 aa22.43■■□□□ 1.18
LYSMD4-202ENST00000344791 FGAP02671 866 aa22.42■■□□□ 1.18
LYSMD4-202ENST00000344791 CCDC73Q6ZRK6 1079 aa22.42■■□□□ 1.18
LYSMD4-202ENST00000344791 MYRIPQ8NFW9 859 aa22.42■■□□□ 1.18
LYSMD4-202ENST00000344791 TMOD3Q9NYL9 352 aa22.42■■□□□ 1.18
LYSMD4-202ENST00000344791 GOLGA6L19H0YKK7 550 aa22.42■■□□□ 1.18
LYSMD4-202ENST00000344791 SYTL4Q96C24 671 aaPredicted RBP22.42■■□□□ 1.18
LYSMD4-202ENST00000344791 HMGN5P82970 282 aaKnown RBP22.41■■□□□ 1.18
LYSMD4-202ENST00000344791 FSIP1Q8NA03 581 aa22.41■■□□□ 1.18
LYSMD4-202ENST00000344791 C16orf45Q96MC5 204 aaPredicted RBP22.41■■□□□ 1.18
LYSMD4-202ENST00000344791 RFX7Q2KHR2 1363 aa22.41■■□□□ 1.18
LYSMD4-202ENST00000344791 KLF18A0A0U1RQI7 1052 aa22.41■■□□□ 1.18
LYSMD4-202ENST00000344791 A0A1B0GVL5 298 aa22.41■■□□□ 1.18
LYSMD4-202ENST00000344791 GOLGA8BA8MQT2 603 aa22.41■■□□□ 1.18
LYSMD4-202ENST00000344791 ERVV-2B6SEH9 535 aa22.41■■□□□ 1.18
LYSMD4-202ENST00000344791 IFIT5Q13325 482 aaKnown RBP22.41■■□□□ 1.18
LYSMD4-202ENST00000344791 LLPHQ9BRT6 129 aaKnown RBP22.41■■□□□ 1.18
LYSMD4-202ENST00000344791 CLIP2Q9UDT6 1046 aa22.41■■□□□ 1.18
LYSMD4-202ENST00000344791 KINO60870 393 aaKnown RBP22.4■■□□□ 1.18
LYSMD4-202ENST00000344791 APPP05067 770 aa22.4■■□□□ 1.18
LYSMD4-202ENST00000344791 FDPSP14324 419 aaKnown RBP22.4■■□□□ 1.18
LYSMD4-202ENST00000344791 ZNF75DP51815 510 aa22.4■■□□□ 1.18
LYSMD4-202ENST00000344791 METTL24Q5JXM2 366 aa22.4■■□□□ 1.18
LYSMD4-202ENST00000344791 ILDR1Q86SU0 546 aaPredicted RBP22.4■■□□□ 1.18
LYSMD4-202ENST00000344791 FOXP2O15409 715 aa22.4■■□□□ 1.18
LYSMD4-202ENST00000344791 PRC1O43663 620 aa22.4■■□□□ 1.18
LYSMD4-202ENST00000344791 TCIRG1Q13488 830 aa22.4■■□□□ 1.18
LYSMD4-202ENST00000344791 CARMIL3Q8ND23 1372 aa22.4■■□□□ 1.18
LYSMD4-202ENST00000344791 ARID5BQ14865 1188 aa22.4■■□□□ 1.18
LYSMD4-202ENST00000344791 HLFQ16534 295 aa22.4■■□□□ 1.18
LYSMD4-202ENST00000344791 IMMTQ16891 758 aaKnown RBP22.4■■□□□ 1.18
LYSMD4-202ENST00000344791 GPR108Q9NPR9 543 aa22.4■■□□□ 1.18
LYSMD4-202ENST00000344791 LMTK3Q96Q04 1460 aa22.4■■□□□ 1.18
LYSMD4-202ENST00000344791 NAA16Q6N069 864 aaPredicted RBP22.39■■□□□ 1.18
LYSMD4-202ENST00000344791 LDHAL6AQ6ZMR3 332 aa22.39■■□□□ 1.18
LYSMD4-202ENST00000344791 CCDC144CPQ8IYA2 1237 aa22.39■■□□□ 1.18
LYSMD4-202ENST00000344791 KIF3AQ9Y496 699 aa22.39■■□□□ 1.18
LYSMD4-202ENST00000344791 BECN2A8MW95 431 aa22.39■■□□□ 1.17
LYSMD4-202ENST00000344791 SF3A1Q15459 793 aaKnown RBP22.39■■□□□ 1.17
LYSMD4-202ENST00000344791 CCDC144BQ3MJ40 725 aa22.39■■□□□ 1.17
LYSMD4-202ENST00000344791 KIF6Q6ZMV9 814 aa22.39■■□□□ 1.17
LYSMD4-202ENST00000344791 HELBQ8NG08 1087 aaPredicted RBP22.39■■□□□ 1.17
LYSMD4-202ENST00000344791 SPTLC3Q9NUV7 552 aa22.39■■□□□ 1.17
LYSMD4-202ENST00000344791 CPLX1O14810 134 aa22.38■■□□□ 1.17
LYSMD4-202ENST00000344791 IDH1O75874 414 aaKnown RBP22.38■■□□□ 1.17
LYSMD4-202ENST00000344791 RALYLQ86SE5 291 aaKnown RBP22.38■■□□□ 1.17
LYSMD4-202ENST00000344791 GREM2Q9H772 168 aa22.38■■□□□ 1.17
LYSMD4-202ENST00000344791 GPAA1O43292 621 aa22.37■■□□□ 1.17
LYSMD4-202ENST00000344791 RBM43Q6ZSC3 357 aaKnown RBP22.37■■□□□ 1.17
LYSMD4-202ENST00000344791 STK11IPQ8N1F8 1099 aa22.37■■□□□ 1.17
LYSMD4-202ENST00000344791 SDF4Q9BRK5 362 aa22.37■■□□□ 1.17
LYSMD4-202ENST00000344791 CNNM1Q9NRU3 951 aa22.37■■□□□ 1.17
LYSMD4-202ENST00000344791 RCOR1Q9UKL0 485 aa22.37■■□□□ 1.17
LYSMD4-202ENST00000344791 CLIC4Q9Y696 253 aa22.37■■□□□ 1.17
LYSMD4-202ENST00000344791 SNW1Q13573 536 aaKnown RBP22.37■■□□□ 1.17
LYSMD4-202ENST00000344791 FILIP1Q7Z7B0 1213 aa22.37■■□□□ 1.17
LYSMD4-202ENST00000344791 NKX2-3Q8TAU0 364 aa22.37■■□□□ 1.17
LYSMD4-202ENST00000344791 C8orf76Q96K31 380 aa22.37■■□□□ 1.17
LYSMD4-202ENST00000344791 ZNF396Q96N95 335 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms