RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 CCDC152Q4G0S7 254 aa8.27□□□□□ -1.09
VCAN-202ENST00000342785 ATL3Q6DD88 541 aa8.27□□□□□ -1.09
VCAN-202ENST00000342785 CCDC102AQ96A19 550 aa8.27□□□□□ -1.09
VCAN-202ENST00000342785 N4BP3O15049 544 aa8.27□□□□□ -1.09
VCAN-202ENST00000342785 CCDC191Q8NCU4 936 aa8.27□□□□□ -1.09
VCAN-202ENST00000342785 TMX1Q9H3N1 280 aa8.27□□□□□ -1.09
VCAN-202ENST00000342785 ERICH4A6NGS2 130 aa8.27□□□□□ -1.09
VCAN-202ENST00000342785 NEURL1BA8MQ27 555 aa8.27□□□□□ -1.09
VCAN-202ENST00000342785 ZSCAN29Q8IWY8 852 aaPredicted RBP8.27□□□□□ -1.09
VCAN-202ENST00000342785 NUP88Q99567 741 aaPredicted RBP8.27□□□□□ -1.09
VCAN-202ENST00000342785 CLSTN2Q9H4D0 955 aa8.27□□□□□ -1.09
VCAN-202ENST00000342785 CFAP65Q6ZU64 1925 aaKnown RBP8.27□□□□□ -1.09
VCAN-202ENST00000342785 AFMP43652 599 aa8.27□□□□□ -1.09
VCAN-202ENST00000342785 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.27□□□□□ -1.09
VCAN-202ENST00000342785 V9GYY5 206 aaPredicted RBP8.27□□□□□ -1.09
VCAN-202ENST00000342785 ROBO2Q9HCK4 1378 aa8.27□□□□□ -1.09
VCAN-202ENST00000342785 KIF5BP33176 963 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 ZSWIM4Q9H7M6 989 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 GOLGA6L9A6NEM1 432 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 TRIM75PA6NK02 468 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 CASQ1P31415 396 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 CUL4AQ13619 759 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 LLPHQ9BRT6 129 aaKnown RBP8.26□□□□□ -1.09
VCAN-202ENST00000342785 IFNKQ9P0W0 207 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 SEC63Q9UGP8 760 aaKnown RBP8.26□□□□□ -1.09
VCAN-202ENST00000342785 STX8Q9UNK0 236 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 PDE4BQ07343 736 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 PROSER3Q2NL68 480 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 DZIP3Q86Y13 1208 aaKnown RBP8.26□□□□□ -1.09
VCAN-202ENST00000342785 IDEP14735 1019 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 YEATS4O95619 227 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 ADCK5Q3MIX3 580 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 JAKMIP3Q5VZ66 844 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 APPBP2Q92624 585 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 GBP3Q9H0R5 595 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 ZSWIM6Q9HCJ5 1215 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 SETQ01105 290 aaPredicted RBP8.26□□□□□ -1.09
VCAN-202ENST00000342785 TTC6Q86TZ1 520 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 MIGA1Q8NAN2 632 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 LSG1Q9H089 658 aaKnown RBP8.26□□□□□ -1.09
VCAN-202ENST00000342785 CBX8Q9HC52 389 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 TPCN1Q9ULQ1 816 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 PREX2Q70Z35 1606 aa8.26□□□□□ -1.09
VCAN-202ENST00000342785 ATP7BP35670 1465 aa8.25□□□□□ -1.09
VCAN-202ENST00000342785 BMP15O95972 392 aa8.25□□□□□ -1.09
VCAN-202ENST00000342785 LDHCP07864 332 aa8.25□□□□□ -1.09
VCAN-202ENST00000342785 PIP4K2BP78356 416 aa8.25□□□□□ -1.09
VCAN-202ENST00000342785 TXLNBQ8N3L3 684 aa8.25□□□□□ -1.09
VCAN-202ENST00000342785 XAGE2Q96GT9 111 aa8.25□□□□□ -1.09
VCAN-202ENST00000342785 FKBP15Q5T1M5 1219 aa8.25□□□□□ -1.09
VCAN-202ENST00000342785 ANKRD18AQ8IVF6 992 aa8.25□□□□□ -1.09
VCAN-202ENST00000342785 CCDC12Q8WUD4 166 aaPredicted RBP8.25□□□□□ -1.09
VCAN-202ENST00000342785 TCP11L1Q9NUJ3 509 aa8.25□□□□□ -1.09
VCAN-202ENST00000342785 NIP7Q9Y221 180 aaKnown RBP eCLIP8.25□□□□□ -1.09
VCAN-202ENST00000342785 RBM5P52756 815 aaKnown RBP eCLIP8.25□□□□□ -1.09
VCAN-202ENST00000342785 SPA17Q15506 151 aa8.25□□□□□ -1.09
VCAN-202ENST00000342785 SEC62Q99442 399 aaKnown RBP8.25□□□□□ -1.09
VCAN-202ENST00000342785 CCDC148Q8NFR7 591 aa8.25□□□□□ -1.09
VCAN-202ENST00000342785 SLU7O95391 586 aaKnown RBP8.25□□□□□ -1.09
VCAN-202ENST00000342785 ZNF397Q8NF99 534 aaPredicted RBP8.25□□□□□ -1.09
VCAN-202ENST00000342785 MAP4K1Q92918 833 aa8.25□□□□□ -1.09
VCAN-202ENST00000342785 ZMYND15Q9H091 742 aa8.25□□□□□ -1.09
VCAN-202ENST00000342785 KAT14Q9H8E8 782 aa8.25□□□□□ -1.09
VCAN-202ENST00000342785 POLR3GO15318 223 aaPredicted RBP8.25□□□□□ -1.09
VCAN-202ENST00000342785 GPAA1O43292 621 aa8.25□□□□□ -1.09
VCAN-202ENST00000342785 LIG1P18858 919 aa8.25□□□□□ -1.09
VCAN-202ENST00000342785 HSPA2P54652 639 aa8.25□□□□□ -1.09
VCAN-202ENST00000342785 BMS1Q14692 1282 aaKnown RBP8.25□□□□□ -1.09
VCAN-202ENST00000342785 SLC4A8Q2Y0W8 1093 aa8.25□□□□□ -1.09
VCAN-202ENST00000342785 NAA16Q6N069 864 aaPredicted RBP8.25□□□□□ -1.09
VCAN-202ENST00000342785 CRNKL1Q9BZJ0 848 aaKnown RBP8.25□□□□□ -1.09
VCAN-202ENST00000342785 PCDH11XQ9BZA7 1347 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 PCDH11YQ9BZA8 1340 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 B4E1Z4 1266 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 FAM193AP78312 1265 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 ZFYVE16Q7Z3T8 1539 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 RGS12O14924 1447 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 MYO5CQ9NQX4 1742 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 MBD4O95243 580 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 IFIT1BQ5T764 474 aaKnown RBP8.24□□□□□ -1.09
VCAN-202ENST00000342785 DNAJC10Q8IXB1 793 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 CRACR2AQ9BSW2 395 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 RAB34Q9BZG1 259 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 VAT1LQ9HCJ6 419 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 COPRSQ9NQ92 184 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 H0YHG0 523 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 MTIF2P46199 727 aaKnown RBP8.24□□□□□ -1.09
VCAN-202ENST00000342785 IQCEQ6IPM2 695 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 MAGEB6Q8N7X4 407 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 GTF3C6Q969F1 213 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 DHX58Q96C10 678 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 ANGEL1Q9UNK9 670 aaKnown RBP8.24□□□□□ -1.09
VCAN-202ENST00000342785 CLASP1Q7Z460 1538 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 PTCH1Q13635 1447 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 SPAG1Q07617 926 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 RRAGBQ5VZM2 374 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 ANO1Q5XXA6 986 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 ITGA6P23229 1130 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 ATP6V1AP38606 617 aa8.24□□□□□ -1.09
VCAN-202ENST00000342785 ACSBG1Q96GR2 724 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms