RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 SCRN1Q12765 414 aa17.96■□□□□ 0.47
PERM1-201ENST00000341290 NCOA5Q9HCD5 579 aaKnown RBP17.96■□□□□ 0.47
PERM1-201ENST00000341290 KIF20AO95235 890 aa17.96■□□□□ 0.46
PERM1-201ENST00000341290 ZSCAN25Q6NSZ9 544 aa17.96■□□□□ 0.46
PERM1-201ENST00000341290 DDX19AQ9NUU7 478 aaKnown RBP17.96■□□□□ 0.46
PERM1-201ENST00000341290 USP16Q9Y5T5 823 aa17.96■□□□□ 0.46
PERM1-201ENST00000341290 TNNI3KQ59H18 835 aa17.95■□□□□ 0.46
PERM1-201ENST00000341290 BARGINQ6ZT62 677 aa17.95■□□□□ 0.46
PERM1-201ENST00000341290 CACTINQ8WUQ7 758 aaKnown RBP17.95■□□□□ 0.46
PERM1-201ENST00000341290 FPGT-TNNI3KV9GXZ4 949 aa17.95■□□□□ 0.46
PERM1-201ENST00000341290 SPATA31A1Q5TZJ5 1347 aa17.95■□□□□ 0.46
PERM1-201ENST00000341290 TOGARAM1Q9Y4F4 1720 aa17.95■□□□□ 0.46
PERM1-201ENST00000341290 APOBRQ0VD83 1088 aa17.95■□□□□ 0.46
PERM1-201ENST00000341290 RESTQ13127 1097 aa17.95■□□□□ 0.46
PERM1-201ENST00000341290 ZNF790Q6PG37 636 aa17.95■□□□□ 0.46
PERM1-201ENST00000341290 C11orf57Q6ZUT1 292 aaPredicted RBP17.95■□□□□ 0.46
PERM1-201ENST00000341290 NEUROD6Q96NK8 337 aa17.95■□□□□ 0.46
PERM1-201ENST00000341290 TPM3P06753 285 aa17.94■□□□□ 0.46
PERM1-201ENST00000341290 STOX1Q6ZVD7 989 aa17.94■□□□□ 0.46
PERM1-201ENST00000341290 BTG4Q9NY30 223 aa17.94■□□□□ 0.46
PERM1-201ENST00000341290 HEG1Q9ULI3 1381 aa17.94■□□□□ 0.46
PERM1-201ENST00000341290 CICQ96RK0 1608 aaPredicted RBP17.94■□□□□ 0.46
PERM1-201ENST00000341290 ZNF496Q96IT1 587 aaPredicted RBP17.93■□□□□ 0.46
PERM1-201ENST00000341290 HMG20BQ9P0W2 317 aa17.93■□□□□ 0.46
PERM1-201ENST00000341290 TNNT1P13805 278 aa17.93■□□□□ 0.46
PERM1-201ENST00000341290 PTPN12Q05209 780 aaKnown RBP17.93■□□□□ 0.46
PERM1-201ENST00000341290 TPD52L1Q16890 204 aaPredicted RBP17.93■□□□□ 0.46
PERM1-201ENST00000341290 CDCA7Q9BWT1 371 aaPredicted RBP17.93■□□□□ 0.46
PERM1-201ENST00000341290 NLRP2Q9NX02 1062 aa17.93■□□□□ 0.46
PERM1-201ENST00000341290 TNS2Q63HR2 1409 aa17.93■□□□□ 0.46
PERM1-201ENST00000341290 PLA2G4DQ86XP0 818 aa17.93■□□□□ 0.46
PERM1-201ENST00000341290 BCL9O00512 1426 aa17.92■□□□□ 0.46
PERM1-201ENST00000341290 ZNF609O15014 1411 aa17.92■□□□□ 0.46
PERM1-201ENST00000341290 UTYO14607 1347 aa17.92■□□□□ 0.46
PERM1-201ENST00000341290 ANKRD13DQ6ZTN6 518 aa17.92■□□□□ 0.46
PERM1-201ENST00000341290 FILIP1Q7Z7B0 1213 aa17.92■□□□□ 0.46
PERM1-201ENST00000341290 CCAR1Q8IX12 1150 aaKnown RBP17.92■□□□□ 0.46
PERM1-201ENST00000341290 GOLPH3LQ9H4A5 285 aa17.92■□□□□ 0.46
PERM1-201ENST00000341290 GOLIM4O00461 696 aa17.92■□□□□ 0.46
PERM1-201ENST00000341290 SNRKQ9NRH2 765 aa17.92■□□□□ 0.46
PERM1-201ENST00000341290 GOLGA6L19H0YKK7 550 aa17.91■□□□□ 0.46
PERM1-201ENST00000341290 A0A087WZG4 1122 aa17.91■□□□□ 0.46
PERM1-201ENST00000341290 USP27XA6NNY8 438 aa17.91■□□□□ 0.46
PERM1-201ENST00000341290 ATP5JP18859 108 aa17.91■□□□□ 0.46
PERM1-201ENST00000341290 TIMM10P62072 90 aa17.91■□□□□ 0.46
PERM1-201ENST00000341290 METTL22Q9BUU2 404 aaPredicted RBP17.91■□□□□ 0.46
PERM1-201ENST00000341290 ZNF831Q5JPB2 1677 aa17.91■□□□□ 0.46
PERM1-201ENST00000341290 UBR2Q8IWV8 1755 aa17.91■□□□□ 0.46
PERM1-201ENST00000341290 ONECUT3O60422 494 aaPredicted RBP17.9■□□□□ 0.46
PERM1-201ENST00000341290 MCMDC2Q4G0Z9 681 aa17.9■□□□□ 0.46
PERM1-201ENST00000341290 RAB11FIP4Q86YS3 637 aa17.9■□□□□ 0.46
PERM1-201ENST00000341290 TDRD7Q8NHU6 1098 aaKnown RBP17.9■□□□□ 0.46
PERM1-201ENST00000341290 TRMT1Q9NXH9 659 aaKnown RBP17.9■□□□□ 0.46
PERM1-201ENST00000341290 ITGB4P16144 1822 aa17.9■□□□□ 0.46
PERM1-201ENST00000341290 KRT32Q14532 448 aa17.9■□□□□ 0.46
PERM1-201ENST00000341290 ZNF771Q7L3S4 317 aaPredicted RBP17.9■□□□□ 0.46
PERM1-201ENST00000341290 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.9■□□□□ 0.46
PERM1-201ENST00000341290 V9GYY5 206 aaPredicted RBP17.9■□□□□ 0.46
PERM1-201ENST00000341290 BRWD3Q6RI45 1802 aa17.9■□□□□ 0.46
PERM1-201ENST00000341290 SBF2Q86WG5 1849 aa17.9■□□□□ 0.46
PERM1-201ENST00000341290 PTPDC1A2A3K4 754 aa17.9■□□□□ 0.46
PERM1-201ENST00000341290 USPL1Q5W0Q7 1092 aa17.9■□□□□ 0.46
PERM1-201ENST00000341290 OTUD7BQ6GQQ9 843 aa17.9■□□□□ 0.46
PERM1-201ENST00000341290 USP28Q96RU2 1077 aa17.9■□□□□ 0.46
PERM1-201ENST00000341290 CTDNEP1O95476 244 aa17.89■□□□□ 0.45
PERM1-201ENST00000341290 RFX5P48382 616 aaPredicted RBP17.89■□□□□ 0.45
PERM1-201ENST00000341290 ME1P48163 572 aa17.89■□□□□ 0.45
PERM1-201ENST00000341290 LMBR1LQ6UX01 489 aa17.89■□□□□ 0.45
PERM1-201ENST00000341290 RBM43Q6ZSC3 357 aaKnown RBP17.89■□□□□ 0.45
PERM1-201ENST00000341290 GPHNQ9NQX3 736 aaPredicted RBP17.89■□□□□ 0.45
PERM1-201ENST00000341290 CFAP45Q9UL16 551 aa17.89■□□□□ 0.45
PERM1-201ENST00000341290 BECN2A8MW95 431 aa17.88■□□□□ 0.45
PERM1-201ENST00000341290 NCBP1Q09161 790 aaKnown RBP17.88■□□□□ 0.45
PERM1-201ENST00000341290 TSGA10IPQ3SY00 556 aa17.88■□□□□ 0.45
PERM1-201ENST00000341290 RAPGEF4Q8WZA2 1011 aa17.88■□□□□ 0.45
PERM1-201ENST00000341290 U3KPZ7 1027 aaPredicted RBP17.88■□□□□ 0.45
PERM1-201ENST00000341290 NSUN7Q8NE18 718 aaKnown RBP17.88■□□□□ 0.45
PERM1-201ENST00000341290 NUTM2BA6NNL0 878 aaPredicted RBP17.88■□□□□ 0.45
PERM1-201ENST00000341290 NUTM2EB1AL46 878 aaPredicted RBP17.88■□□□□ 0.45
PERM1-201ENST00000341290 ADAMTS2O95450 1211 aa17.88■□□□□ 0.45
PERM1-201ENST00000341290 ADD1P35611 737 aaKnown RBP17.88■□□□□ 0.45
PERM1-201ENST00000341290 TTLL5Q6EMB2 1281 aa17.88■□□□□ 0.45
PERM1-201ENST00000341290 NUTM2AQ8IVF1 878 aaPredicted RBP17.88■□□□□ 0.45
PERM1-201ENST00000341290 SYTL4Q96C24 671 aaPredicted RBP17.88■□□□□ 0.45
PERM1-201ENST00000341290 ALDH8A1Q9H2A2 487 aaPredicted RBP17.88■□□□□ 0.45
PERM1-201ENST00000341290 SLC52A2Q9HAB3 445 aa17.88■□□□□ 0.45
PERM1-201ENST00000341290 COPRSQ9NQ92 184 aa17.88■□□□□ 0.45
PERM1-201ENST00000341290 NHSQ6T4R5 1651 aa17.87■□□□□ 0.45
PERM1-201ENST00000341290 CDK11BP21127 795 aaKnown RBP17.87■□□□□ 0.45
PERM1-201ENST00000341290 AFF2P51816 1311 aa17.87■□□□□ 0.45
PERM1-201ENST00000341290 IQCB1Q15051 598 aa17.87■□□□□ 0.45
PERM1-201ENST00000341290 ZNF594Q96JF6 807 aaPredicted RBP17.87■□□□□ 0.45
PERM1-201ENST00000341290 CTIFO43310 598 aaKnown RBP17.86■□□□□ 0.45
PERM1-201ENST00000341290 ANKRD7Q92527 254 aa17.86■□□□□ 0.45
PERM1-201ENST00000341290 NKX1-1Q15270 411 aaPredicted RBP17.86■□□□□ 0.45
PERM1-201ENST00000341290 HSP90AB3PQ58FF7 597 aa17.86■□□□□ 0.45
PERM1-201ENST00000341290 TTC5Q8N0Z6 440 aa17.86■□□□□ 0.45
PERM1-201ENST00000341290 FSIP1Q8NA03 581 aa17.86■□□□□ 0.45
PERM1-201ENST00000341290 HAUS7Q99871 368 aa17.86■□□□□ 0.45
PERM1-201ENST00000341290 DOT1LQ8TEK3 1739 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms