RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 CLSTN2Q9H4D0 955 aa17.16■□□□□ 0.34
TDP2-201ENST00000341060 STRN4Q9NRL3 753 aa17.16■□□□□ 0.34
TDP2-201ENST00000341060 CFAP45Q9UL16 551 aa17.16■□□□□ 0.34
TDP2-201ENST00000341060 AKAP11Q9UKA4 1901 aa17.16■□□□□ 0.34
TDP2-201ENST00000341060 NAA16Q6N069 864 aaPredicted RBP17.15■□□□□ 0.34
TDP2-201ENST00000341060 ZNF830Q96NB3 372 aaPredicted RBP17.15■□□□□ 0.34
TDP2-201ENST00000341060 TTC12Q9H892 705 aaPredicted RBP17.15■□□□□ 0.34
TDP2-201ENST00000341060 CEP126Q9P2H0 1117 aa17.15■□□□□ 0.34
TDP2-201ENST00000341060 SALL1Q9NSC2 1324 aa17.15■□□□□ 0.34
TDP2-201ENST00000341060 CTDNEP1O95476 244 aa17.15■□□□□ 0.34
TDP2-201ENST00000341060 PLCB2Q00722 1185 aa17.15■□□□□ 0.34
TDP2-201ENST00000341060 APOBRQ0VD83 1088 aa17.15■□□□□ 0.34
TDP2-201ENST00000341060 TCIRG1Q13488 830 aa17.15■□□□□ 0.34
TDP2-201ENST00000341060 CCDC57Q2TAC2 916 aa17.15■□□□□ 0.34
TDP2-201ENST00000341060 SASS6Q6UVJ0 657 aa17.15■□□□□ 0.34
TDP2-201ENST00000341060 MPNDQ8N594 471 aa17.15■□□□□ 0.34
TDP2-201ENST00000341060 KIF3AQ9Y496 699 aa17.15■□□□□ 0.34
TDP2-201ENST00000341060 NR1I2O75469 434 aa17.14■□□□□ 0.33
TDP2-201ENST00000341060 BICD2Q8TD16 824 aa17.14■□□□□ 0.33
TDP2-201ENST00000341060 UQCRHLA0A096LP55 91 aa17.14■□□□□ 0.33
TDP2-201ENST00000341060 PTPDC1A2A3K4 754 aa17.14■□□□□ 0.33
TDP2-201ENST00000341060 UQCRHP07919 91 aa17.14■□□□□ 0.33
TDP2-201ENST00000341060 COL16A1Q07092 1604 aaPredicted RBP17.14■□□□□ 0.33
TDP2-201ENST00000341060 TRIM28Q13263 835 aaKnown RBP17.14■□□□□ 0.33
TDP2-201ENST00000341060 LRRFIP1Q32MZ4 808 aaKnown RBP17.14■□□□□ 0.33
TDP2-201ENST00000341060 CKAP2LQ8IYA6 745 aa17.14■□□□□ 0.33
TDP2-201ENST00000341060 FBXL16Q8N461 479 aa17.14■□□□□ 0.33
TDP2-201ENST00000341060 AKAP2Q9Y2D5 859 aa17.14■□□□□ 0.33
TDP2-201ENST00000341060 A0A0G2JLW4 131 aa17.13■□□□□ 0.33
TDP2-201ENST00000341060 M0R2C6 588 aa17.13■□□□□ 0.33
TDP2-201ENST00000341060 ADAMTS2O95450 1211 aa17.13■□□□□ 0.33
TDP2-201ENST00000341060 TPM3P06753 285 aa17.13■□□□□ 0.33
TDP2-201ENST00000341060 EVA1CP58658 441 aa17.13■□□□□ 0.33
TDP2-201ENST00000341060 NOLC1Q14978 699 aaKnown RBP eCLIP17.13■□□□□ 0.33
TDP2-201ENST00000341060 CCDC158Q5M9N0 1113 aa17.13■□□□□ 0.33
TDP2-201ENST00000341060 ZNF274Q96GC6 653 aaPredicted RBP17.13■□□□□ 0.33
TDP2-201ENST00000341060 MYO5AQ9Y4I1 1855 aaKnown RBP17.13■□□□□ 0.33
TDP2-201ENST00000341060 ABCC12Q96J65 1359 aa17.12■□□□□ 0.33
TDP2-201ENST00000341060 NUTM2BA6NNL0 878 aaPredicted RBP17.12■□□□□ 0.33
TDP2-201ENST00000341060 NUTM2EB1AL46 878 aaPredicted RBP17.12■□□□□ 0.33
TDP2-201ENST00000341060 ADD1P35611 737 aaKnown RBP17.12■□□□□ 0.33
TDP2-201ENST00000341060 NUTM2AQ8IVF1 878 aaPredicted RBP17.12■□□□□ 0.33
TDP2-201ENST00000341060 OSBP2Q969R2 916 aa17.12■□□□□ 0.33
TDP2-201ENST00000341060 PLA2G12BQ9BX93 195 aa17.12■□□□□ 0.33
TDP2-201ENST00000341060 BTG4Q9NY30 223 aa17.12■□□□□ 0.33
TDP2-201ENST00000341060 PCCAP05165 728 aaPredicted RBP17.12■□□□□ 0.33
TDP2-201ENST00000341060 ZFYP08048 801 aaPredicted RBP17.12■□□□□ 0.33
TDP2-201ENST00000341060 ANO6Q4KMQ2 910 aa17.12■□□□□ 0.33
TDP2-201ENST00000341060 LUZP1Q86V48 1076 aa17.12■□□□□ 0.33
TDP2-201ENST00000341060 CHMP4CQ96CF2 233 aa17.12■□□□□ 0.33
TDP2-201ENST00000341060 SPTLC3Q9NUV7 552 aa17.12■□□□□ 0.33
TDP2-201ENST00000341060 TMOD3Q9NYL9 352 aa17.12■□□□□ 0.33
TDP2-201ENST00000341060 NUP98P52948 1817 aa17.12■□□□□ 0.33
TDP2-201ENST00000341060 GOLGA6L6A8MZA4 724 aa17.11■□□□□ 0.33
TDP2-201ENST00000341060 PDIA3P30101 505 aaKnown RBP17.11■□□□□ 0.33
TDP2-201ENST00000341060 FKBP4Q02790 459 aaKnown RBP eCLIP17.11■□□□□ 0.33
TDP2-201ENST00000341060 TTC39AQ5SRH9 613 aa17.11■□□□□ 0.33
TDP2-201ENST00000341060 VSIG10Q8N0Z9 540 aa17.11■□□□□ 0.33
TDP2-201ENST00000341060 XAGE2Q96GT9 111 aa17.11■□□□□ 0.33
TDP2-201ENST00000341060 EVCP57679 992 aa17.11■□□□□ 0.33
TDP2-201ENST00000341060 CCT2P78371 535 aaKnown RBP17.11■□□□□ 0.33
TDP2-201ENST00000341060 ATL3Q6DD88 541 aa17.11■□□□□ 0.33
TDP2-201ENST00000341060 TEX13AQ9BXU3 409 aaPredicted RBP17.11■□□□□ 0.33
TDP2-201ENST00000341060 CBX8Q9HC52 389 aa17.11■□□□□ 0.33
TDP2-201ENST00000341060 FOXP2O15409 715 aa17.1■□□□□ 0.33
TDP2-201ENST00000341060 CSF1RP07333 972 aa17.1■□□□□ 0.33
TDP2-201ENST00000341060 ADORA1P30542 326 aa17.1■□□□□ 0.33
TDP2-201ENST00000341060 GORABQ5T7V8 394 aa17.1■□□□□ 0.33
TDP2-201ENST00000341060 CTNNA3Q9UI47 895 aa17.1■□□□□ 0.33
TDP2-201ENST00000341060 RCOR1Q9UKL0 485 aa17.1■□□□□ 0.33
TDP2-201ENST00000341060 CARMIL3Q8ND23 1372 aa17.1■□□□□ 0.33
TDP2-201ENST00000341060 DYNC1I1O14576 645 aa17.09■□□□□ 0.33
TDP2-201ENST00000341060 TTLL5Q6EMB2 1281 aa17.09■□□□□ 0.33
TDP2-201ENST00000341060 KIF6Q6ZMV9 814 aa17.09■□□□□ 0.33
TDP2-201ENST00000341060 ZBTB38Q8NAP3 1195 aaPredicted RBP17.09■□□□□ 0.33
TDP2-201ENST00000341060 KCNF1Q9H3M0 494 aa17.09■□□□□ 0.33
TDP2-201ENST00000341060 NCOA5Q9HCD5 579 aaKnown RBP17.09■□□□□ 0.33
TDP2-201ENST00000341060 RIC1Q4ADV7 1423 aa17.09■□□□□ 0.33
TDP2-201ENST00000341060 LRP6O75581 1613 aa17.09■□□□□ 0.33
TDP2-201ENST00000341060 CAVIN2O95810 425 aa17.09■□□□□ 0.33
TDP2-201ENST00000341060 DNTTIP2Q5QJE6 756 aaKnown RBP17.09■□□□□ 0.33
TDP2-201ENST00000341060 FAM89AQ96GI7 184 aa17.09■□□□□ 0.33
TDP2-201ENST00000341060 ZNF330Q9Y3S2 320 aaPredicted RBP17.09■□□□□ 0.33
TDP2-201ENST00000341060 C4AP0C0L4 1744 aa17.09■□□□□ 0.33
TDP2-201ENST00000341060 C4BP0C0L5 1744 aa17.09■□□□□ 0.33
TDP2-201ENST00000341060 COL22A1Q8NFW1 1626 aaPredicted RBP17.08■□□□□ 0.33
TDP2-201ENST00000341060 IFIT5Q13325 482 aaKnown RBP17.08■□□□□ 0.33
TDP2-201ENST00000341060 IMMTQ16891 758 aaKnown RBP17.08■□□□□ 0.33
TDP2-201ENST00000341060 CHST3Q7LGC8 479 aa17.08■□□□□ 0.33
TDP2-201ENST00000341060 TDRD7Q8NHU6 1098 aaKnown RBP17.08■□□□□ 0.33
TDP2-201ENST00000341060 KIAA1524Q8TCG1 905 aa17.08■□□□□ 0.33
TDP2-201ENST00000341060 PDCL3Q9H2J4 239 aa17.08■□□□□ 0.33
TDP2-201ENST00000341060 KAT6BQ8WYB5 2073 aa17.08■□□□□ 0.32
TDP2-201ENST00000341060 CDHR2Q9BYE9 1310 aa17.08■□□□□ 0.32
TDP2-201ENST00000341060 TAF7LQ5H9L4 462 aa17.08■□□□□ 0.32
TDP2-201ENST00000341060 PRIMPOLQ96LW4 560 aa17.08■□□□□ 0.32
TDP2-201ENST00000341060 CHD4Q14839 1912 aa17.07■□□□□ 0.32
TDP2-201ENST00000341060 ZNF165P49910 485 aa17.07■□□□□ 0.32
TDP2-201ENST00000341060 CEBPZQ03701 1054 aaKnown RBP17.07■□□□□ 0.32
TDP2-201ENST00000341060 SCARF1Q14162 830 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms