RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 ISY1Q9ULR0 285 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-201ENST00000337659 PCP11498 1178 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-201ENST00000337659 ADD2P35612 726 aa6.5□□□□□ -1.37
PRPF4B-201ENST00000337659 ATAD5Q96QE3 1844 aa6.5□□□□□ -1.37
PRPF4B-201ENST00000337659 BRD1O95696 1058 aa6.5□□□□□ -1.37
PRPF4B-201ENST00000337659 SLC5A1P13866 664 aa6.5□□□□□ -1.37
PRPF4B-201ENST00000337659 TTF1Q15361 905 aaPredicted RBP6.5□□□□□ -1.37
PRPF4B-201ENST00000337659 DDX54Q8TDD1 881 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-201ENST00000337659 CRAMP1Q96RY5 1269 aa6.5□□□□□ -1.37
PRPF4B-201ENST00000337659 GREM2Q9H772 168 aa6.5□□□□□ -1.37
PRPF4B-201ENST00000337659 CHMP5Q9NZZ3 219 aa6.5□□□□□ -1.37
PRPF4B-201ENST00000337659 MKRN1Q9UHC7 482 aaKnown RBP6.5□□□□□ -1.37
PRPF4B-201ENST00000337659 PALD1Q9ULE6 856 aa6.5□□□□□ -1.37
PRPF4B-201ENST00000337659 IRS4O14654 1257 aaPredicted RBP6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 LRRC24Q50LG9 513 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 DEFB132Q7Z7B7 95 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 MRIQ9BWK5 157 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 NBPF3Q9H094 633 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 SPON1Q9HCB6 807 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 ZDHHC9Q9Y397 364 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 U3KPZ7 1027 aaPredicted RBP6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 ITGA6P23229 1130 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 ATP6V1AP38606 617 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 IFFO2Q5TF58 517 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 FAM163AQ96GL9 167 aaPredicted RBP6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 SCN9AQ15858 1988 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 A0A0D9SFI3 127 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 A0A1B0GUL7 405 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 FSD2A1L4K1 749 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 SLC27A2O14975 620 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 IL1R1P14778 569 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 KRT32Q14532 448 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 RUFY3Q7L099 469 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 AACSQ86V21 672 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 LLPHQ9BRT6 129 aaKnown RBP6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 SH2B1Q9NRF2 756 aaPredicted RBP6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 MAST3O60307 1309 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 MYH6P13533 1939 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 ANKRD18BA2A2Z9 1011 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 POLRMTO00411 1230 aaKnown RBP6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 MCMDC2Q4G0Z9 681 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 ZSCAN31Q96LW9 406 aaPredicted RBP6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 PAG1Q9NWQ8 432 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 ZBTB47Q9UFB7 747 aaPredicted RBP6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 FAM205AQ6ZU69 1335 aa6.49□□□□□ -1.37
PRPF4B-201ENST00000337659 RNF113AO15541 343 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 NPM3O75607 178 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 MFAP1P55081 439 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 NMIQ13287 307 aaPredicted RBP6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 CCDC152Q4G0S7 254 aa6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 ANKS1AQ92625 1134 aa6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 NECTIN2Q92692 538 aa6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 PKNOX2Q96KN3 472 aa6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 DBNDD2Q9BQY9 259 aa6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 VPS33BQ9H267 617 aa6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 SUGT1Q9Y2Z0 365 aa6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 HMGB1P09429 215 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 GYS1P13807 737 aa6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 PTH1RQ03431 593 aa6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 TOB2Q14106 344 aaPredicted RBP6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 EZH2Q15910 746 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 FAM98CQ17RN3 349 aaKnown RBP6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 CERS3Q8IU89 383 aa6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 FLAD1Q8NFF5 587 aa6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 XAGE2Q96GT9 111 aa6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 MCAMP43121 646 aa6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 NUTM1Q86Y26 1132 aa6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 APPBP2Q92624 585 aa6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 MTFR1LQ9H019 292 aa6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 MYO3BQ8WXR4 1341 aa6.48□□□□□ -1.37
PRPF4B-201ENST00000337659 IFIT2P09913 472 aaKnown RBP6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 RPS6KB1P23443 525 aa6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 GRIPAP1Q4V328 841 aa6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 TBC1D9BQ66K14 1250 aa6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 CREB3L3Q68CJ9 461 aa6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 MB21D2Q8IYB1 491 aaPredicted RBP6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 IFIT5Q13325 482 aaKnown RBP6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 RASEFQ8IZ41 740 aa6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 MAP3K14Q99558 947 aa6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 PUS3Q9BZE2 481 aaKnown RBP6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 GAKO14976 1311 aa6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 STK36Q9NRP7 1315 aa6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 LRRFIP1Q32MZ4 808 aaKnown RBP6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 SBK1Q52WX2 424 aa6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 PTF1AQ7RTS3 328 aa6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 ZNF589Q86UQ0 364 aaPredicted RBP6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 KCNG1Q9UIX4 513 aa6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 ELP1O95163 1332 aa6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 ATP5J2-PTCD1G3V325 749 aa6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 PTCD1O75127 700 aaKnown RBP6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 MMP14P50281 582 aa6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 METTL16Q86W50 562 aaKnown RBP6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 ARHGEF1Q92888 912 aaKnown RBP6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 ZNF274Q96GC6 653 aaPredicted RBP6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 ZBTB3Q9H5J0 574 aa6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 BAZ2AQ9UIF9 1905 aaKnown RBP6.47□□□□□ -1.37
PRPF4B-201ENST00000337659 LRRC37A2A6NM11 1700 aa6.46□□□□□ -1.37
PRPF4B-201ENST00000337659 COL4A5P29400 1685 aa6.46□□□□□ -1.37
PRPF4B-201ENST00000337659 PPP4CP60510 307 aa6.46□□□□□ -1.37
PRPF4B-201ENST00000337659 C3orf67Q6ZVT6 689 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms