RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 MYH11P35749 1972 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 REC8O95072 547 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 GSDMDP57764 484 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 PTPN14Q15678 1187 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 ZC3H18Q86VM9 953 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 IL1RAPL2Q9NP60 686 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 ALDH3A1P30838 453 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 CWC27Q6UX04 472 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 VPS36Q86VN1 386 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 SCN8AQ9UQD0 1980 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 FOSP01100 380 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 TEKT1Q969V4 418 aa6.86□□□□□ -1.31
CDC42BPA-201ENST00000334218 A0A0B4J269 797 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 IPO5O00410 1097 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 TOP1P11387 765 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 TUBB3Q13509 450 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 TSTA3Q13630 321 aaPredicted RBP6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 NFKBIBQ15653 356 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 NXNQ6DKJ4 435 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 ZC3H15Q8WU90 426 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 IQCDQ96DY2 449 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 COQ7Q99807 217 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 MTRF1LQ9UGC7 380 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 CIB2O75838 187 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 OCA2Q04671 838 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 KRT17Q04695 432 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 CCDC144BQ3MJ40 725 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 WDR75Q8IWA0 830 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 HPS1Q92902 700 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 CHRAC1Q9NRG0 131 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 SNAPC4Q5SXM2 1469 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 COG7P83436 770 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 SPOUT1Q5T280 376 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 EFCAB13Q8IY85 973 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 SENP3Q9H4L4 574 aaPredicted RBP6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 RASAL2Q9UJF2 1139 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 GOLGA6BA6NDN3 693 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 PRDM1O75626 825 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 INPP5BP32019 993 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 PPP1R14CQ8TAE6 165 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 P3H4Q92791 437 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 BATF3Q9NR55 127 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 CTNNA3Q9UI47 895 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 SERPINA10Q9UK55 444 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 HDAC9Q9UKV0 1011 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 SEPT2Q15019 361 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 PHLDB3Q6NSJ2 640 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 TRIML2Q8N7C3 387 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 KIAA0586Q9BVV6 1533 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 PSPC1Q8WXF1 523 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 SH3GL2Q99962 352 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 CCDC90BQ9GZT6 254 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 FBXL5Q9UKA1 691 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 TUBB2AQ13885 445 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 MAP7D3Q8IWC1 876 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 CTAGE3PQ8IX95 158 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 SECISBP2LQ93073 1101 aaKnown RBP6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 TUBB2BQ9BVA1 445 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 CETN2P41208 172 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 UBL4BQ8N7F7 174 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 USP28Q96RU2 1077 aa6.85□□□□□ -1.31
CDC42BPA-201ENST00000334218 KCNA2P16389 499 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 KRT72Q14CN4 511 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 FOXD4L6Q3SYB3 417 aaPredicted RBP6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 FOXD4L3Q6VB84 417 aaPredicted RBP6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 MICAL1Q8TDZ2 1067 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 ZNF653Q96CK0 615 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 CPLX2Q6PUV4 134 aaKnown RBP6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 NOL7Q9UMY1 257 aaKnown RBP6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 CTAGE8P0CG41 777 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 CAPN2P17655 700 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 CTAGE4Q8IX94 777 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 NUDCQ9Y266 331 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 ESRRBO95718 433 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 TMED10P49755 219 aaKnown RBP6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 KIF11P52732 1056 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 DMTNQ08495 405 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 CCT6BQ92526 530 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 UNC45AQ9H3U1 944 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 ESRRGP62508 458 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 ZKSCAN2Q63HK3 967 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 TRIM69Q86WT6 500 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 CDCA5Q96FF9 252 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 GIGYF1O75420 1035 aaPredicted RBP6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 E2F6O75461 281 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 WBP4O75554 376 aaKnown RBP6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 PDE3BQ13370 1112 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 TRIM39Q9HCM9 518 aa6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 IQSEC3Q9UPP2 1182 aaPredicted RBP6.84□□□□□ -1.31
CDC42BPA-201ENST00000334218 H0Y626 953 aa6.84□□□□□ -1.32
CDC42BPA-201ENST00000334218 TRIM16O95361 564 aa6.84□□□□□ -1.32
CDC42BPA-201ENST00000334218 ABCD1P33897 745 aa6.84□□□□□ -1.32
CDC42BPA-201ENST00000334218 SNCBQ16143 134 aa6.84□□□□□ -1.32
CDC42BPA-201ENST00000334218 PPP6R1Q9UPN7 881 aa6.84□□□□□ -1.32
CDC42BPA-201ENST00000334218 HSF2BPO75031 334 aa6.84□□□□□ -1.32
CDC42BPA-201ENST00000334218 GAS8O95995 478 aa6.84□□□□□ -1.32
CDC42BPA-201ENST00000334218 CKAP4Q07065 602 aaKnown RBP6.84□□□□□ -1.32
CDC42BPA-201ENST00000334218 KIFAP3Q92845 792 aa6.84□□□□□ -1.32
CDC42BPA-201ENST00000334218 C11orf95C9JLR9 678 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms