RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 NPHP3Q7Z494 1330 aa12.93□□□□□ -0.34
CCDC87-201ENST00000333861 TMEM232C9JQI7 657 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 PHACTR2O75167 634 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 MARCKSP29966 332 aaPredicted RBP12.92□□□□□ -0.34
CCDC87-201ENST00000333861 CASQ1P31415 396 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 EVCP57679 992 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 TPM4P67936 248 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 UTP14AQ9BVJ6 771 aaKnown RBP12.92□□□□□ -0.34
CCDC87-201ENST00000333861 RABEP2Q9H5N1 569 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 MAP3K2Q9Y2U5 619 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 STRCP1A6NGW2 1772 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 H3BQF6 201 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 GLRX3O76003 335 aaKnown RBP12.92□□□□□ -0.34
CCDC87-201ENST00000333861 SASH1O94885 1247 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 RPS6KB1P23443 525 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 PPARDQ03181 441 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 RESTQ13127 1097 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 CADPS2Q86UW7 1296 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 SCAND2PQ9GZW5 306 aaPredicted RBP12.92□□□□□ -0.34
CCDC87-201ENST00000333861 TSPYL1Q9H0U9 437 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 SUGCTQ9HAC7 445 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 CDK12Q9NYV4 1490 aaPredicted RBP12.92□□□□□ -0.34
CCDC87-201ENST00000333861 COBLO75128 1261 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 MYL6BP14649 208 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 MCM6Q14566 821 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 CCDC93Q567U6 631 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 SPECC1Q5M775 1068 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 PACS2Q86VP3 889 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 MRFAP1L1Q96HT8 127 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 L2HGDHQ9H9P8 463 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 ADAM21Q9UKJ8 722 aa12.92□□□□□ -0.34
CCDC87-201ENST00000333861 FMN2Q9NZ56 1722 aa12.91□□□□□ -0.34
CCDC87-201ENST00000333861 HAND2P61296 217 aa12.91□□□□□ -0.34
CCDC87-201ENST00000333861 KARSQ15046 597 aaKnown RBP12.91□□□□□ -0.34
CCDC87-201ENST00000333861 KRT28Q7Z3Y7 464 aa12.91□□□□□ -0.34
CCDC87-201ENST00000333861 SRLQ86TD4 932 aa12.91□□□□□ -0.34
CCDC87-201ENST00000333861 PDILTQ8N807 584 aa12.91□□□□□ -0.34
CCDC87-201ENST00000333861 DNAAF4Q8WXU2 420 aa12.91□□□□□ -0.34
CCDC87-201ENST00000333861 DESI2Q9BSY9 194 aa12.91□□□□□ -0.34
CCDC87-201ENST00000333861 RNF216Q9NWF9 866 aaPredicted RBP12.91□□□□□ -0.34
CCDC87-201ENST00000333861 ADCY9O60503 1353 aa12.91□□□□□ -0.34
CCDC87-201ENST00000333861 AATKQ6ZMQ8 1374 aa12.91□□□□□ -0.34
CCDC87-201ENST00000333861 TOPAZ1Q8N9V7 1692 aa12.91□□□□□ -0.34
CCDC87-201ENST00000333861 GNAT3A8MTJ3 354 aa12.91□□□□□ -0.34
CCDC87-201ENST00000333861 N4BP1O75113 896 aaKnown RBP12.91□□□□□ -0.34
CCDC87-201ENST00000333861 RXRAP19793 462 aa12.91□□□□□ -0.34
CCDC87-201ENST00000333861 NDUFA8P51970 172 aa12.91□□□□□ -0.34
CCDC87-201ENST00000333861 SUCLG2Q96I99 432 aa12.91□□□□□ -0.34
CCDC87-201ENST00000333861 SH2B1Q9NRF2 756 aaPredicted RBP12.91□□□□□ -0.34
CCDC87-201ENST00000333861 ARGLU1Q9NWB6 273 aaPredicted RBP12.91□□□□□ -0.34
CCDC87-201ENST00000333861 KINO60870 393 aaKnown RBP12.9□□□□□ -0.34
CCDC87-201ENST00000333861 POLA2Q14181 598 aa12.9□□□□□ -0.34
CCDC87-201ENST00000333861 LRRC59Q96AG4 307 aaKnown RBP12.9□□□□□ -0.34
CCDC87-201ENST00000333861 ZSCAN31Q96LW9 406 aaPredicted RBP12.9□□□□□ -0.34
CCDC87-201ENST00000333861 BICC1Q9H694 974 aaKnown RBP12.9□□□□□ -0.34
CCDC87-201ENST00000333861 VPS18Q9P253 973 aa12.9□□□□□ -0.34
CCDC87-201ENST00000333861 CLIC4Q9Y696 253 aa12.9□□□□□ -0.34
CCDC87-201ENST00000333861 COL15A1P39059 1388 aa12.9□□□□□ -0.34
CCDC87-201ENST00000333861 SSH2Q76I76 1423 aa12.9□□□□□ -0.34
CCDC87-201ENST00000333861 C1orf167Q5SNV9 1468 aa12.9□□□□□ -0.34
CCDC87-201ENST00000333861 NWD1Q149M9 1564 aa12.9□□□□□ -0.34
CCDC87-201ENST00000333861 MON2Q7Z3U7 1717 aa12.9□□□□□ -0.34
CCDC87-201ENST00000333861 MYCNP04198 464 aaPredicted RBP12.9□□□□□ -0.34
CCDC87-201ENST00000333861 SFPQP23246 707 aaKnown RBP eCLIP12.9□□□□□ -0.34
CCDC87-201ENST00000333861 BEND3Q5T5X7 828 aa12.9□□□□□ -0.34
CCDC87-201ENST00000333861 STOX1Q6ZVD7 989 aa12.9□□□□□ -0.34
CCDC87-201ENST00000333861 AKAP12Q02952 1782 aa12.89□□□□□ -0.35
CCDC87-201ENST00000333861 STX1AQ16623 288 aa12.89□□□□□ -0.35
CCDC87-201ENST00000333861 CCDC73Q6ZRK6 1079 aa12.89□□□□□ -0.35
CCDC87-201ENST00000333861 RBM43Q6ZSC3 357 aaKnown RBP12.89□□□□□ -0.35
CCDC87-201ENST00000333861 RUFY2Q8WXA3 655 aa12.89□□□□□ -0.35
CCDC87-201ENST00000333861 MAP4K1Q92918 833 aa12.89□□□□□ -0.35
CCDC87-201ENST00000333861 ATG3Q9NT62 314 aa12.89□□□□□ -0.35
CCDC87-201ENST00000333861 CDC25BP30305 580 aa12.89□□□□□ -0.35
CCDC87-201ENST00000333861 HAP1P54257 671 aaPredicted RBP12.89□□□□□ -0.35
CCDC87-201ENST00000333861 CC2D1AQ6P1N0 951 aaPredicted RBP12.89□□□□□ -0.35
CCDC87-201ENST00000333861 TEX2Q8IWB9 1127 aa12.89□□□□□ -0.35
CCDC87-201ENST00000333861 GPS2Q13227 327 aa12.89□□□□□ -0.35
CCDC87-201ENST00000333861 ICE2Q659A1 982 aa12.89□□□□□ -0.35
CCDC87-201ENST00000333861 AIFM3Q96NN9 605 aa12.89□□□□□ -0.35
CCDC87-201ENST00000333861 EFCC1Q9HA90 598 aa12.89□□□□□ -0.35
CCDC87-201ENST00000333861 ELP1O95163 1332 aa12.88□□□□□ -0.35
CCDC87-201ENST00000333861 UBE2Q2LH0YL09 131 aa12.88□□□□□ -0.35
CCDC87-201ENST00000333861 CTDNEP1O95476 244 aa12.88□□□□□ -0.35
CCDC87-201ENST00000333861 CYP21A2P08686 494 aa12.88□□□□□ -0.35
CCDC87-201ENST00000333861 SF3A1Q15459 793 aaKnown RBP12.88□□□□□ -0.35
CCDC87-201ENST00000333861 EPHA10Q5JZY3 1008 aa12.88□□□□□ -0.35
CCDC87-201ENST00000333861 NBPF6Q5VWK0 638 aa12.88□□□□□ -0.35
CCDC87-201ENST00000333861 NBPF4Q96M43 638 aa12.88□□□□□ -0.35
CCDC87-201ENST00000333861 PUF60Q9UHX1 559 aaKnown RBP12.88□□□□□ -0.35
CCDC87-201ENST00000333861 OVOS2A0A0J9YW53 1432 aa12.88□□□□□ -0.35
CCDC87-201ENST00000333861 OVOS2Q6IE36 1432 aa12.88□□□□□ -0.35
CCDC87-201ENST00000333861 PTPDC1A2A3K4 754 aa12.88□□□□□ -0.35
CCDC87-201ENST00000333861 NEMFO60524 1076 aa12.88□□□□□ -0.35
CCDC87-201ENST00000333861 TADA3O75528 432 aa12.88□□□□□ -0.35
CCDC87-201ENST00000333861 ADD1P35611 737 aaKnown RBP12.88□□□□□ -0.35
CCDC87-201ENST00000333861 ETF1P62495 437 aaKnown RBP12.88□□□□□ -0.35
CCDC87-201ENST00000333861 PARD6BQ9BYG5 372 aa12.88□□□□□ -0.35
CCDC87-201ENST00000333861 PCDHA7Q9UN72 937 aa12.88□□□□□ -0.35
CCDC87-201ENST00000333861 ADKP55263 362 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms