RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 HMGN5P82970 282 aaKnown RBP15.41■□□□□ 0.06
CLGN-201ENST00000325617 FOXO4P98177 505 aa15.41■□□□□ 0.06
CLGN-201ENST00000325617 IFNL2Q8IZJ0 200 aa15.41■□□□□ 0.06
CLGN-201ENST00000325617 KBTBD3Q8NAB2 608 aa15.41■□□□□ 0.06
CLGN-201ENST00000325617 DDX19AQ9NUU7 478 aaKnown RBP15.41■□□□□ 0.06
CLGN-201ENST00000325617 HMG20BQ9P0W2 317 aa15.41■□□□□ 0.06
CLGN-201ENST00000325617 U3KPZ7 1027 aaPredicted RBP15.41■□□□□ 0.06
CLGN-201ENST00000325617 IFIT1P09914 478 aaKnown RBP15.41■□□□□ 0.06
CLGN-201ENST00000325617 OSBP2Q969R2 916 aa15.41■□□□□ 0.06
CLGN-201ENST00000325617 DHX32Q7L7V1 743 aaKnown RBP15.4■□□□□ 0.06
CLGN-201ENST00000325617 CCDC94Q9BW85 323 aaPredicted RBP15.4■□□□□ 0.06
CLGN-201ENST00000325617 INCENPQ9NQS7 918 aa15.4■□□□□ 0.06
CLGN-201ENST00000325617 A0A1B0GUL7 405 aa15.4■□□□□ 0.06
CLGN-201ENST00000325617 GOLGA6L19H0YKK7 550 aa15.4■□□□□ 0.06
CLGN-201ENST00000325617 AOPEPQ8N6M6 819 aa15.4■□□□□ 0.06
CLGN-201ENST00000325617 MAST3O60307 1309 aa15.4■□□□□ 0.06
CLGN-201ENST00000325617 UBE2Q2LH0YL09 131 aa15.39■□□□□ 0.05
CLGN-201ENST00000325617 CASP7P55210 303 aa15.39■□□□□ 0.05
CLGN-201ENST00000325617 PLA2G4DQ86XP0 818 aa15.39■□□□□ 0.05
CLGN-201ENST00000325617 PDCL2Q8N4E4 241 aa15.39■□□□□ 0.05
CLGN-201ENST00000325617 MAP7D2Q96T17 732 aa15.39■□□□□ 0.05
CLGN-201ENST00000325617 CLIC4Q9Y696 253 aa15.39■□□□□ 0.05
CLGN-201ENST00000325617 BECN2A8MW95 431 aa15.39■□□□□ 0.05
CLGN-201ENST00000325617 FDPSP14324 419 aaKnown RBP15.39■□□□□ 0.05
CLGN-201ENST00000325617 PDIA3P30101 505 aaKnown RBP15.39■□□□□ 0.05
CLGN-201ENST00000325617 CHAF1AQ13111 956 aaPredicted RBP15.39■□□□□ 0.05
CLGN-201ENST00000325617 IQCB1Q15051 598 aa15.39■□□□□ 0.05
CLGN-201ENST00000325617 SNW1Q13573 536 aaKnown RBP15.38■□□□□ 0.05
CLGN-201ENST00000325617 HSP90AA4PQ58FG1 418 aa15.38■□□□□ 0.05
CLGN-201ENST00000325617 KRT32Q14532 448 aa15.38■□□□□ 0.05
CLGN-201ENST00000325617 GORABQ5T7V8 394 aa15.38■□□□□ 0.05
CLGN-201ENST00000325617 FAM89AQ96GI7 184 aa15.38■□□□□ 0.05
CLGN-201ENST00000325617 ADGRL3Q9HAR2 1447 aa15.38■□□□□ 0.05
CLGN-201ENST00000325617 PFKFB2O60825 505 aa15.38■□□□□ 0.05
CLGN-201ENST00000325617 MARCKSP29966 332 aaPredicted RBP15.38■□□□□ 0.05
CLGN-201ENST00000325617 TSGA10IPQ3SY00 556 aa15.38■□□□□ 0.05
CLGN-201ENST00000325617 TDRD7Q8NHU6 1098 aaKnown RBP15.38■□□□□ 0.05
CLGN-201ENST00000325617 SDF4Q9BRK5 362 aa15.38■□□□□ 0.05
CLGN-201ENST00000325617 PRDM4Q9UKN5 801 aa15.38■□□□□ 0.05
CLGN-201ENST00000325617 PCDHA7Q9UN72 937 aa15.37■□□□□ 0.05
CLGN-201ENST00000325617 RABL6Q3YEC7 729 aaPredicted RBP15.37■□□□□ 0.05
CLGN-201ENST00000325617 CCDC73Q6ZRK6 1079 aa15.37■□□□□ 0.05
CLGN-201ENST00000325617 SNAP23O00161 211 aa15.36■□□□□ 0.05
CLGN-201ENST00000325617 NDUFA8P51970 172 aa15.36■□□□□ 0.05
CLGN-201ENST00000325617 GOLGA8FQ08AF8 430 aa15.36■□□□□ 0.05
CLGN-201ENST00000325617 GOLGA8DPQ0D2H9 430 aa15.36■□□□□ 0.05
CLGN-201ENST00000325617 SMARCC2Q8TAQ2 1214 aa15.36■□□□□ 0.05
CLGN-201ENST00000325617 KINO60870 393 aaKnown RBP15.36■□□□□ 0.05
CLGN-201ENST00000325617 GPTP24298 496 aa15.36■□□□□ 0.05
CLGN-201ENST00000325617 PUS7LQ9H0K6 701 aaKnown RBP15.36■□□□□ 0.05
CLGN-201ENST00000325617 SENP2Q9HC62 589 aa15.36■□□□□ 0.05
CLGN-201ENST00000325617 CFAP45Q9UL16 551 aa15.36■□□□□ 0.05
CLGN-201ENST00000325617 PALLDQ8WX93 1383 aa15.36■□□□□ 0.05
CLGN-201ENST00000325617 EXOSC10Q01780 885 aaKnown RBP15.35■□□□□ 0.05
CLGN-201ENST00000325617 NCBP1Q09161 790 aaKnown RBP15.35■□□□□ 0.05
CLGN-201ENST00000325617 DPCR1Q3MIW9 517 aa15.35■□□□□ 0.05
CLGN-201ENST00000325617 PLBD2Q8NHP8 589 aa15.35■□□□□ 0.05
CLGN-201ENST00000325617 ZBTB9Q96C00 473 aa15.35■□□□□ 0.05
CLGN-201ENST00000325617 SF3A1Q15459 793 aaKnown RBP15.35■□□□□ 0.05
CLGN-201ENST00000325617 RBM43Q6ZSC3 357 aaKnown RBP15.35■□□□□ 0.05
CLGN-201ENST00000325617 DHX40Q8IX18 779 aaKnown RBP15.35■□□□□ 0.05
CLGN-201ENST00000325617 CHD2O14647 1828 aaKnown RBP15.35■□□□□ 0.05
CLGN-201ENST00000325617 AFDNP55196 1824 aaKnown RBP15.35■□□□□ 0.05
CLGN-201ENST00000325617 LAMA4Q16363 1823 aa15.35■□□□□ 0.05
CLGN-201ENST00000325617 KLF18A0A0U1RQI7 1052 aa15.35■□□□□ 0.05
CLGN-201ENST00000325617 KIF28PB7ZC32 967 aa15.35■□□□□ 0.05
CLGN-201ENST00000325617 FOXP2O15409 715 aa15.35■□□□□ 0.05
CLGN-201ENST00000325617 SKILP12757 684 aa15.35■□□□□ 0.05
CLGN-201ENST00000325617 GTF2F1P35269 517 aaKnown RBP eCLIP15.35■□□□□ 0.05
CLGN-201ENST00000325617 ZAP70P43403 619 aa15.35■□□□□ 0.05
CLGN-201ENST00000325617 ZMYM1Q5SVZ6 1142 aa15.35■□□□□ 0.05
CLGN-201ENST00000325617 MYL10Q9BUA6 226 aa15.35■□□□□ 0.05
CLGN-201ENST00000325617 RCOR1Q9UKL0 485 aa15.35■□□□□ 0.05
CLGN-201ENST00000325617 CCDC69A6NI79 296 aa15.34■□□□□ 0.05
CLGN-201ENST00000325617 LRRC8AQ8IWT6 810 aa15.34■□□□□ 0.05
CLGN-201ENST00000325617 CWC25Q9NXE8 425 aaPredicted RBP15.34■□□□□ 0.05
CLGN-201ENST00000325617 JCADQ9P266 1359 aa15.34■□□□□ 0.05
CLGN-201ENST00000325617 DCAF5Q96JK2 942 aa15.34■□□□□ 0.05
CLGN-201ENST00000325617 STRN4Q9NRL3 753 aa15.34■□□□□ 0.05
CLGN-201ENST00000325617 NCAPD2Q15021 1401 aa15.34■□□□□ 0.05
CLGN-201ENST00000325617 H7C1W4 665 aa15.33■□□□□ 0.05
CLGN-201ENST00000325617 RNF113AO15541 343 aaKnown RBP15.33■□□□□ 0.05
CLGN-201ENST00000325617 FGAP02671 866 aa15.33■□□□□ 0.05
CLGN-201ENST00000325617 ALDH8A1Q9H2A2 487 aaPredicted RBP15.33■□□□□ 0.05
CLGN-201ENST00000325617 GOLGA8BA8MQT2 603 aa15.33■□□□□ 0.04
CLGN-201ENST00000325617 EYA2O00167 538 aa15.33■□□□□ 0.04
CLGN-201ENST00000325617 STK38Q15208 465 aa15.33■□□□□ 0.04
CLGN-201ENST00000325617 SPECC1Q5M775 1068 aa15.33■□□□□ 0.04
CLGN-201ENST00000325617 HELBQ8NG08 1087 aaPredicted RBP15.33■□□□□ 0.04
CLGN-201ENST00000325617 ZSCAN16Q9H4T2 348 aaPredicted RBP15.33■□□□□ 0.04
CLGN-201ENST00000325617 SMC2O95347 1197 aa15.33■□□□□ 0.04
CLGN-201ENST00000325617 CCDC82Q8N4S0 544 aa15.33■□□□□ 0.04
CLGN-201ENST00000325617 ENGASEQ8NFI3 743 aa15.33■□□□□ 0.04
CLGN-201ENST00000325617 ORC3Q9UBD5 711 aaPredicted RBP15.33■□□□□ 0.04
CLGN-201ENST00000325617 CARMIL3Q8ND23 1372 aa15.32■□□□□ 0.04
CLGN-201ENST00000325617 PRC1O43663 620 aa15.32■□□□□ 0.04
CLGN-201ENST00000325617 ZSCAN20P17040 1043 aaPredicted RBP15.32■□□□□ 0.04
CLGN-201ENST00000325617 STX1AQ16623 288 aa15.32■□□□□ 0.04
CLGN-201ENST00000325617 TTC39AQ5SRH9 613 aa15.32■□□□□ 0.04
CLGN-201ENST00000325617 LRRN4CLQ8ND94 238 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms