RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 ZNF219Q9P2Y4 722 aaPredicted RBP23.85■■□□□ 1.41
RNF40-201ENST00000324685 MAP3K1Q13233 1512 aa23.85■■□□□ 1.41
RNF40-201ENST00000324685 NESP48681 1621 aa23.85■■□□□ 1.41
RNF40-201ENST00000324685 GNAT2P19087 354 aa23.85■■□□□ 1.41
RNF40-201ENST00000324685 CCDC121Q6ZUS5 278 aa23.85■■□□□ 1.41
RNF40-201ENST00000324685 DDX23Q9BUQ8 820 aaKnown RBP23.85■■□□□ 1.41
RNF40-201ENST00000324685 SMC6Q96SB8 1091 aa23.84■■□□□ 1.41
RNF40-201ENST00000324685 IMPG2Q9BZV3 1241 aa23.84■■□□□ 1.41
RNF40-201ENST00000324685 PTGS1P23219 599 aa23.84■■□□□ 1.41
RNF40-201ENST00000324685 GSTA5Q7RTV2 222 aa23.84■■□□□ 1.41
RNF40-201ENST00000324685 KRT2P35908 639 aa23.84■■□□□ 1.41
RNF40-201ENST00000324685 MRPL50Q8N5N7 158 aaKnown RBP23.84■■□□□ 1.41
RNF40-201ENST00000324685 CCDC42Q96M95 316 aa23.84■■□□□ 1.41
RNF40-201ENST00000324685 TUBBP07437 444 aa23.83■■□□□ 1.41
RNF40-201ENST00000324685 XRCC6P12956 609 aaKnown RBP eCLIP23.83■■□□□ 1.41
RNF40-201ENST00000324685 HSP90AA4PQ58FG1 418 aa23.83■■□□□ 1.41
RNF40-201ENST00000324685 PSMD1Q99460 953 aa23.83■■□□□ 1.41
RNF40-201ENST00000324685 ADAMTS2O95450 1211 aa23.83■■□□□ 1.4
RNF40-201ENST00000324685 RGS22Q8NE09 1264 aa23.83■■□□□ 1.4
RNF40-201ENST00000324685 CFAP57Q96MR6 1250 aa23.83■■□□□ 1.4
RNF40-201ENST00000324685 NMIQ13287 307 aaPredicted RBP23.82■■□□□ 1.4
RNF40-201ENST00000324685 NEK11Q8NG66 645 aa23.82■■□□□ 1.4
RNF40-201ENST00000324685 GRM8O00222 908 aa23.82■■□□□ 1.4
RNF40-201ENST00000324685 RFC4P35249 363 aa23.82■■□□□ 1.4
RNF40-201ENST00000324685 RAB3IL1Q8TBN0 382 aa23.82■■□□□ 1.4
RNF40-201ENST00000324685 NBPF6Q5VWK0 638 aa23.82■■□□□ 1.4
RNF40-201ENST00000324685 NAA16Q6N069 864 aaPredicted RBP23.82■■□□□ 1.4
RNF40-201ENST00000324685 NBPF5PQ86XG9 351 aaPredicted RBP23.82■■□□□ 1.4
RNF40-201ENST00000324685 SMARCC2Q8TAQ2 1214 aa23.82■■□□□ 1.4
RNF40-201ENST00000324685 NBPF4Q96M43 638 aa23.82■■□□□ 1.4
RNF40-201ENST00000324685 MYCNP04198 464 aaPredicted RBP23.82■■□□□ 1.4
RNF40-201ENST00000324685 KRT79Q5XKE5 535 aa23.82■■□□□ 1.4
RNF40-201ENST00000324685 ZFP91Q96JP5 570 aaPredicted RBP23.82■■□□□ 1.4
RNF40-201ENST00000324685 SELENOSQ9BQE4 189 aa23.82■■□□□ 1.4
RNF40-201ENST00000324685 BRAPQ7Z569 592 aa23.81■■□□□ 1.4
RNF40-201ENST00000324685 NBPF11Q86T75 865 aa23.81■■□□□ 1.4
RNF40-201ENST00000324685 PAG1Q9NWQ8 432 aa23.81■■□□□ 1.4
RNF40-201ENST00000324685 ACEP12821 1306 aa23.81■■□□□ 1.4
RNF40-201ENST00000324685 TSGA10Q9BZW7 698 aa23.81■■□□□ 1.4
RNF40-201ENST00000324685 GTF2A1P52655 376 aaPredicted RBP23.81■■□□□ 1.4
RNF40-201ENST00000324685 UBXN1Q04323 297 aa23.81■■□□□ 1.4
RNF40-201ENST00000324685 KSR2Q6VAB6 950 aa23.81■■□□□ 1.4
RNF40-201ENST00000324685 ARFGAP2Q8N6H7 521 aa23.81■■□□□ 1.4
RNF40-201ENST00000324685 SERPINA10Q9UK55 444 aa23.81■■□□□ 1.4
RNF40-201ENST00000324685 XAGE3Q8WTP9 111 aa23.8■■□□□ 1.4
RNF40-201ENST00000324685 JARID2Q92833 1246 aaPredicted RBP23.8■■□□□ 1.4
RNF40-201ENST00000324685 CAPN2P17655 700 aa23.8■■□□□ 1.4
RNF40-201ENST00000324685 ASXL1Q8IXJ9 1541 aa23.8■■□□□ 1.4
RNF40-201ENST00000324685 RRP36Q96EU6 259 aaKnown RBP23.8■■□□□ 1.4
RNF40-201ENST00000324685 TCEANC2Q96MN5 208 aa23.8■■□□□ 1.4
RNF40-201ENST00000324685 MAGEB6P1A0A0J9YX57 407 aa23.8■■□□□ 1.4
RNF40-201ENST00000324685 SLC9C2Q5TAH2 1124 aa23.8■■□□□ 1.4
RNF40-201ENST00000324685 DAAM2Q86T65 1068 aa23.8■■□□□ 1.4
RNF40-201ENST00000324685 FMNL3Q8IVF7 1028 aa23.8■■□□□ 1.4
RNF40-201ENST00000324685 CUL7Q14999 1698 aa23.79■■□□□ 1.4
RNF40-201ENST00000324685 RNF113AO15541 343 aaKnown RBP23.79■■□□□ 1.4
RNF40-201ENST00000324685 LMOD1P29536 600 aaPredicted RBP23.79■■□□□ 1.4
RNF40-201ENST00000324685 RAB3GAP1Q15042 981 aa23.79■■□□□ 1.4
RNF40-201ENST00000324685 EEF2P13639 858 aaKnown RBP23.79■■□□□ 1.4
RNF40-201ENST00000324685 ZBTB16Q05516 673 aa23.78■■□□□ 1.4
RNF40-201ENST00000324685 MTRF1LQ9UGC7 380 aaKnown RBP23.78■■□□□ 1.4
RNF40-201ENST00000324685 HDAC9Q9UKV0 1011 aa23.78■■□□□ 1.4
RNF40-201ENST00000324685 PCDHB15Q9Y5E8 787 aa23.78■■□□□ 1.4
RNF40-201ENST00000324685 EBAG9O00559 213 aa23.78■■□□□ 1.4
RNF40-201ENST00000324685 FAM13AO94988 1023 aa23.78■■□□□ 1.4
RNF40-201ENST00000324685 CCDC63Q8NA47 563 aa23.78■■□□□ 1.4
RNF40-201ENST00000324685 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.78■■□□□ 1.4
RNF40-201ENST00000324685 V9GYY5 206 aaPredicted RBP23.78■■□□□ 1.4
RNF40-201ENST00000324685 TNNC1P63316 161 aa23.78■■□□□ 1.4
RNF40-201ENST00000324685 IDI1Q13907 227 aa23.78■■□□□ 1.4
RNF40-201ENST00000324685 MSANTD4Q8NCY6 345 aa23.78■■□□□ 1.4
RNF40-201ENST00000324685 RAD50Q92878 1312 aa23.78■■□□□ 1.4
RNF40-201ENST00000324685 TMEM110-MUSTN1A8MSY1 372 aa23.78■■□□□ 1.4
RNF40-201ENST00000324685 HMGXB3Q12766 1538 aa23.78■■□□□ 1.4
RNF40-201ENST00000324685 ATP2A2P16615 1042 aaKnown RBP23.78■■□□□ 1.4
RNF40-201ENST00000324685 ATL3Q6DD88 541 aa23.78■■□□□ 1.4
RNF40-201ENST00000324685 CCDC50Q8IVM0 306 aa23.78■■□□□ 1.4
RNF40-201ENST00000324685 SMC5Q8IY18 1101 aa23.78■■□□□ 1.4
RNF40-201ENST00000324685 ZNF622Q969S3 477 aaKnown RBP eCLIP23.78■■□□□ 1.47e-8■■□□□ 13.5
RNF40-201ENST00000324685 ANXA1P04083 346 aa23.77■■□□□ 1.4
RNF40-201ENST00000324685 ANAPC4Q9UJX5 808 aa23.77■■□□□ 1.4
RNF40-201ENST00000324685 PRIM1P49642 420 aaKnown RBP23.77■■□□□ 1.4
RNF40-201ENST00000324685 ZNF804AQ7Z570 1209 aa23.77■■□□□ 1.4
RNF40-201ENST00000324685 INTS4Q96HW7 963 aaKnown RBP23.77■■□□□ 1.4
RNF40-201ENST00000324685 VAV2P52735 878 aa23.77■■□□□ 1.4
RNF40-201ENST00000324685 KIAA1524Q8TCG1 905 aa23.77■■□□□ 1.4
RNF40-201ENST00000324685 GUCA1BQ9UMX6 200 aa23.77■■□□□ 1.4
RNF40-201ENST00000324685 ZNF569Q5MCW4 686 aa23.77■■□□□ 1.4
RNF40-201ENST00000324685 CAPZA3Q96KX2 299 aa23.77■■□□□ 1.4
RNF40-201ENST00000324685 MICALL1Q8N3F8 863 aa23.76■■□□□ 1.39
RNF40-201ENST00000324685 MRPS9P82933 396 aaKnown RBP23.76■■□□□ 1.39
RNF40-201ENST00000324685 LMBR1LQ6UX01 489 aa23.76■■□□□ 1.39
RNF40-201ENST00000324685 ZNF354CQ86Y25 554 aa23.76■■□□□ 1.39
RNF40-201ENST00000324685 NPHP3Q7Z494 1330 aa23.76■■□□□ 1.39
RNF40-201ENST00000324685 COPS6Q7L5N1 327 aa23.76■■□□□ 1.39
RNF40-201ENST00000324685 OTUD6BQ8N6M0 293 aa23.76■■□□□ 1.39
RNF40-201ENST00000324685 VPS18Q9P253 973 aa23.76■■□□□ 1.39
RNF40-201ENST00000324685 NGLY1Q96IV0 654 aa23.76■■□□□ 1.39
RNF40-201ENST00000324685 GJC1P36383 396 aa23.75■■□□□ 1.39
RNF40-201ENST00000324685 ARID5AQ03989 594 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms